RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 FKBP5Q13451 457 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF1-216ENST00000598587 SUSD4Q5VX71 490 aa15.4■□□□□ 0.06
ARHGEF1-216ENST00000598587 KSR2Q6VAB6 950 aa15.4■□□□□ 0.06
ARHGEF1-216ENST00000598587 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
ARHGEF1-216ENST00000598587 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
ARHGEF1-216ENST00000598587 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
ARHGEF1-216ENST00000598587 ABCC12Q96J65 1359 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 HSP90B1P14625 803 aaKnown RBP15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 KCNA3P22001 575 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 ERFEQ4G0M1 354 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 STYK1Q6J9G0 422 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 TRMT2AQ8IZ69 625 aaKnown RBP15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 TTLL6Q8N841 843 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 CNKSR1Q969H4 720 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 ZNF622Q969S3 477 aaKnown RBP eCLIP15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 CDCA7LQ96GN5 454 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 MASTLQ96GX5 879 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 METTL22Q9BUU2 404 aaPredicted RBP15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 WWC3Q9ULE0 1092 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 MAP3K2Q9Y2U5 619 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
ARHGEF1-216ENST00000598587 SLX4Q8IY92 1834 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 ADCY9O60503 1353 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 PI4KAP2A4QPH2 592 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 SRGNP10124 158 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 NPR1P16066 1061 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 PI4KAP1Q8N8J0 262 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 CCDC191Q8NCU4 936 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 MYD88Q99836 296 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 ISCA1Q9BUE6 129 aa15.38■□□□□ 0.05
ARHGEF1-216ENST00000598587 FER1L6Q2WGJ9 1857 aa15.37■□□□□ 0.05
ARHGEF1-216ENST00000598587 CCDC88AQ3V6T2 1871 aa15.37■□□□□ 0.05
ARHGEF1-216ENST00000598587 ATP5J2-PTCD1G3V325 749 aa15.37■□□□□ 0.05
ARHGEF1-216ENST00000598587 ALDH1L2Q3SY69 923 aa15.37■□□□□ 0.05
ARHGEF1-216ENST00000598587 NLRP3Q96P20 1036 aa15.37■□□□□ 0.05
ARHGEF1-216ENST00000598587 SBF1O95248 1867 aa15.36■□□□□ 0.05
ARHGEF1-216ENST00000598587 KLRG2A4D1S0 409 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF1-216ENST00000598587 ALDH1B1P30837 517 aa15.36■□□□□ 0.05
ARHGEF1-216ENST00000598587 SOGA3Q5TF21 947 aa15.36■□□□□ 0.05
ARHGEF1-216ENST00000598587 G2E3Q7L622 706 aa15.36■□□□□ 0.05
ARHGEF1-216ENST00000598587 CWC25Q9NXE8 425 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF1-216ENST00000598587 CRY2Q49AN0 593 aa15.35■□□□□ 0.05
ARHGEF1-216ENST00000598587 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
ARHGEF1-216ENST00000598587 DICER1Q9UPY3 1922 aaKnown RBP15.35■□□□□ 0.05
ARHGEF1-216ENST00000598587 TIAM2Q8IVF5 1701 aa15.34■□□□□ 0.05
ARHGEF1-216ENST00000598587 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
ARHGEF1-216ENST00000598587 ZBTB38Q8NAP3 1195 aaPredicted RBP15.34■□□□□ 0.05
ARHGEF1-216ENST00000598587 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
ARHGEF1-216ENST00000598587 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
ARHGEF1-216ENST00000598587 PTPRCP08575 1304 aa15.34■□□□□ 0.05
ARHGEF1-216ENST00000598587 PRPF40BQ6NWY9 871 aaKnown RBP15.33■□□□□ 0.04
ARHGEF1-216ENST00000598587 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.04
ARHGEF1-216ENST00000598587 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
ARHGEF1-216ENST00000598587 UTRNP46939 3433 aa15.33■□□□□ 0.04
ARHGEF1-216ENST00000598587 SPEF2Q9C093 1822 aa15.32■□□□□ 0.04
ARHGEF1-216ENST00000598587 PCCAP05165 728 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF1-216ENST00000598587 YY1P25490 414 aa15.32■□□□□ 0.04
ARHGEF1-216ENST00000598587 LINS1Q8NG48 757 aa15.32■□□□□ 0.04
ARHGEF1-216ENST00000598587 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
ARHGEF1-216ENST00000598587 TAF1P21675 1872 aa15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 HOXA10P31260 410 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 MRPL50Q8N5N7 158 aaKnown RBP15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
ARHGEF1-216ENST00000598587 LRRC37AA6NMS7 1700 aa15.3■□□□□ 0.04
ARHGEF1-216ENST00000598587 IGKV5-2P06315 115 aa15.3■□□□□ 0.04
ARHGEF1-216ENST00000598587 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
ARHGEF1-216ENST00000598587 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF1-216ENST00000598587 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
ARHGEF1-216ENST00000598587 CRAMP1Q96RY5 1269 aa15.3■□□□□ 0.04
ARHGEF1-216ENST00000598587 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
ARHGEF1-216ENST00000598587 C21orf2O43822 256 aa15.29■□□□□ 0.04
ARHGEF1-216ENST00000598587 PDE8AO60658 829 aa15.29■□□□□ 0.04
ARHGEF1-216ENST00000598587 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
ARHGEF1-216ENST00000598587 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
ARHGEF1-216ENST00000598587 F6X3S4 739 aa15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 GCKRQ14397 625 aa15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 CCDC152Q4G0S7 254 aa15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 SYNE4Q8N205 404 aa15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF1-216ENST00000598587 ABCC4O15439 1325 aa15.27■□□□□ 0.04
ARHGEF1-216ENST00000598587 ALDH1L1O75891 902 aa15.27■□□□□ 0.04
ARHGEF1-216ENST00000598587 BRPF1P55201 1214 aaPredicted RBP15.27■□□□□ 0.04
ARHGEF1-216ENST00000598587 UBE3BQ7Z3V4 1068 aa15.27■□□□□ 0.04
ARHGEF1-216ENST00000598587 TMC4Q7Z404 712 aa15.27■□□□□ 0.04
ARHGEF1-216ENST00000598587 RTKN2Q8IZC4 609 aa15.27■□□□□ 0.04
ARHGEF1-216ENST00000598587 LTBP3Q9NS15 1303 aa15.26■□□□□ 0.03
ARHGEF1-216ENST00000598587 RARSP54136 660 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms