RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 GNAI1P63096 354 aa20.23■□□□□ 0.83
PPFIA4-208ENST00000597023 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
PPFIA4-208ENST00000597023 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
PPFIA4-208ENST00000597023 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
PPFIA4-208ENST00000597023 IFT57Q9NWB7 429 aa20.23■□□□□ 0.83
PPFIA4-208ENST00000597023 HOXB7P09629 217 aa20.22■□□□□ 0.83
PPFIA4-208ENST00000597023 DPY19L2Q6NUT2 758 aa20.22■□□□□ 0.83
PPFIA4-208ENST00000597023 NLRP10Q86W26 655 aa20.22■□□□□ 0.83
PPFIA4-208ENST00000597023 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
PPFIA4-208ENST00000597023 MRS2Q9HD23 443 aa20.22■□□□□ 0.83
PPFIA4-208ENST00000597023 DBF4Q9UBU7 674 aaPredicted RBP20.22■□□□□ 0.83
PPFIA4-208ENST00000597023 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
PPFIA4-208ENST00000597023 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
PPFIA4-208ENST00000597023 FKBP4Q02790 459 aaKnown RBP eCLIP20.21■□□□□ 0.83
PPFIA4-208ENST00000597023 HSP90AB3PQ58FF7 597 aa20.21■□□□□ 0.83
PPFIA4-208ENST00000597023 C8orf58Q8NAV2 365 aa20.21■□□□□ 0.83
PPFIA4-208ENST00000597023 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 CCDC88AQ3V6T2 1871 aa20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 POTECB2RU33 542 aa20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 VEGFAP15692 232 aaPredicted RBP20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 CALD1Q05682 793 aaKnown RBP20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 RTKN2Q8IZC4 609 aa20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 RBM17Q96I25 401 aaKnown RBP20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 NLRP3Q96P20 1036 aa20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 TRMT112Q9UI30 125 aaKnown RBP20.2■□□□□ 0.82
PPFIA4-208ENST00000597023 ATP5J2-PTCD1G3V325 749 aa20.19■□□□□ 0.82
PPFIA4-208ENST00000597023 HOXA10P31260 410 aaPredicted RBP20.19■□□□□ 0.82
PPFIA4-208ENST00000597023 PLBD2Q8NHP8 589 aa20.19■□□□□ 0.82
PPFIA4-208ENST00000597023 SLC10A5Q5PT55 438 aa20.18■□□□□ 0.82
PPFIA4-208ENST00000597023 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
PPFIA4-208ENST00000597023 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
PPFIA4-208ENST00000597023 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
PPFIA4-208ENST00000597023 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
PPFIA4-208ENST00000597023 TIAM2Q8IVF5 1701 aa20.18■□□□□ 0.82
PPFIA4-208ENST00000597023 ARFGEF2Q9Y6D5 1785 aa20.17■□□□□ 0.82
PPFIA4-208ENST00000597023 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
PPFIA4-208ENST00000597023 HTRA3P83110 453 aa20.17■□□□□ 0.82
PPFIA4-208ENST00000597023 TSPYL6Q8N831 410 aa20.17■□□□□ 0.82
PPFIA4-208ENST00000597023 CRAMP1Q96RY5 1269 aa20.17■□□□□ 0.82
PPFIA4-208ENST00000597023 RIC1Q4ADV7 1423 aa20.17■□□□□ 0.82
PPFIA4-208ENST00000597023 IARSP41252 1262 aaKnown RBP20.16■□□□□ 0.82
PPFIA4-208ENST00000597023 APLP1P51693 650 aa20.16■□□□□ 0.82
PPFIA4-208ENST00000597023 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
PPFIA4-208ENST00000597023 FSTL1Q12841 308 aa20.15■□□□□ 0.82
PPFIA4-208ENST00000597023 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
PPFIA4-208ENST00000597023 SMC1BQ8NDV3 1235 aa20.15■□□□□ 0.82
PPFIA4-208ENST00000597023 ISCA1Q9BUE6 129 aa20.15■□□□□ 0.82
PPFIA4-208ENST00000597023 SH3TC1Q8TE82 1336 aa20.15■□□□□ 0.82
PPFIA4-208ENST00000597023 ZNF541Q9H0D2 1346 aa20.15■□□□□ 0.82
PPFIA4-208ENST00000597023 ABCC4O15439 1325 aa20.14■□□□□ 0.81
PPFIA4-208ENST00000597023 RIC3Q7Z5B4 369 aa20.14■□□□□ 0.81
PPFIA4-208ENST00000597023 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
PPFIA4-208ENST00000597023 CEP350Q5VT06 3117 aa20.14■□□□□ 0.81
PPFIA4-208ENST00000597023 PSMD1Q99460 953 aa20.13■□□□□ 0.81
PPFIA4-208ENST00000597023 SNED1Q8TER0 1413 aa20.12■□□□□ 0.81
PPFIA4-208ENST00000597023 POTEIP0CG38 1075 aa20.12■□□□□ 0.81
PPFIA4-208ENST00000597023 POTEJP0CG39 1038 aa20.12■□□□□ 0.81
PPFIA4-208ENST00000597023 CC2D2BQ6DHV5 1058 aa20.12■□□□□ 0.81
PPFIA4-208ENST00000597023 RNF123Q5XPI4 1314 aa20.11■□□□□ 0.81
PPFIA4-208ENST00000597023 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
PPFIA4-208ENST00000597023 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
PPFIA4-208ENST00000597023 MYD88Q99836 296 aa20.11■□□□□ 0.81
PPFIA4-208ENST00000597023 DICER1Q9UPY3 1922 aaKnown RBP20.1■□□□□ 0.81
PPFIA4-208ENST00000597023 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
PPFIA4-208ENST00000597023 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
PPFIA4-208ENST00000597023 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
PPFIA4-208ENST00000597023 ATP6V0A2Q9Y487 856 aa20.1■□□□□ 0.81
PPFIA4-208ENST00000597023 FZD9O00144 591 aa20.09■□□□□ 0.81
PPFIA4-208ENST00000597023 LARGE2Q8N3Y3 721 aa20.09■□□□□ 0.81
PPFIA4-208ENST00000597023 JDP2Q8WYK2 163 aa20.09■□□□□ 0.81
PPFIA4-208ENST00000597023 JARID2Q92833 1246 aaPredicted RBP20.09■□□□□ 0.81
PPFIA4-208ENST00000597023 TMX4Q9H1E5 349 aaPredicted RBP20.09■□□□□ 0.81
PPFIA4-208ENST00000597023 WDR90Q96KV7 1748 aa20.09■□□□□ 0.81
PPFIA4-208ENST00000597023 DNAJC5GQ8N7S2 189 aa20.08■□□□□ 0.81
PPFIA4-208ENST00000597023 ANKRD36CQ5JPF3 1778 aa20.08■□□□□ 0.8
PPFIA4-208ENST00000597023 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 BBOX1O75936 387 aa20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 GRAPQ13588 217 aa20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 AOC3Q16853 763 aa20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 GRAPLQ8TC17 118 aaPredicted RBP20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 L3MBTL3Q96JM7 780 aaPredicted RBP20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 GJA3Q9Y6H8 435 aa20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 COL4A5P29400 1685 aa20.07■□□□□ 0.8
PPFIA4-208ENST00000597023 PPIP5K2O43314 1243 aa20.06■□□□□ 0.8
PPFIA4-208ENST00000597023 TWISTNBQ3B726 338 aaPredicted RBP20.06■□□□□ 0.8
PPFIA4-208ENST00000597023 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
PPFIA4-208ENST00000597023 SP8Q8IXZ3 490 aa20.06■□□□□ 0.8
PPFIA4-208ENST00000597023 TAF1DQ9H5J8 278 aaPredicted RBP20.06■□□□□ 0.8
PPFIA4-208ENST00000597023 IQCA1LA6NCM1 817 aa20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 EIF6P56537 245 aaKnown RBP20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 TRIM28Q13263 835 aaKnown RBP20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 EAPPQ56P03 285 aaPredicted RBP20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 DPP8Q6V1X1 898 aaPredicted RBP20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 G2E3Q7L622 706 aa20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 MPNDQ8N594 471 aa20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 CELF1Q92879 486 aaKnown RBP20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 MAP3K2Q9Y2U5 619 aa20.05■□□□□ 0.8
PPFIA4-208ENST00000597023 DDX58O95786 925 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms