RNA–Protein interactions for RNA: ENST00000596360.1

CRLF1-204, Transcript of cytokine receptor like factor 1, humanhuman

TSL 2

Gene CRLF1, Length 413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-204ENST00000596360 TTLL6Q8N841 843 aa20.59■□□□□ 0.89
CRLF1-204ENST00000596360 COL11A2P13942 1736 aaPredicted RBP20.58■□□□□ 0.89
CRLF1-204ENST00000596360 STYK1Q6J9G0 422 aa20.58■□□□□ 0.89
CRLF1-204ENST00000596360 CDCA7LQ96GN5 454 aa20.58■□□□□ 0.89
CRLF1-204ENST00000596360 ABCC12Q96J65 1359 aa20.58■□□□□ 0.88
CRLF1-204ENST00000596360 SLC10A5Q5PT55 438 aa20.57■□□□□ 0.88
CRLF1-204ENST00000596360 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
CRLF1-204ENST00000596360 G2E3Q7L622 706 aa20.57■□□□□ 0.88
CRLF1-204ENST00000596360 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.88
CRLF1-204ENST00000596360 MASTLQ96GX5 879 aa20.57■□□□□ 0.88
CRLF1-204ENST00000596360 CNKSR1Q969H4 720 aa20.56■□□□□ 0.88
CRLF1-204ENST00000596360 METTL22Q9BUU2 404 aaPredicted RBP20.56■□□□□ 0.88
CRLF1-204ENST00000596360 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
CRLF1-204ENST00000596360 NPR1P16066 1061 aa20.55■□□□□ 0.88
CRLF1-204ENST00000596360 FLIIQ13045 1269 aa20.55■□□□□ 0.88
CRLF1-204ENST00000596360 CRY2Q49AN0 593 aa20.55■□□□□ 0.88
CRLF1-204ENST00000596360 TRMT112Q9UI30 125 aaKnown RBP20.55■□□□□ 0.88
CRLF1-204ENST00000596360 SH3TC1Q8TE82 1336 aa20.54■□□□□ 0.88
CRLF1-204ENST00000596360 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
CRLF1-204ENST00000596360 YY1P25490 414 aa20.54■□□□□ 0.88
CRLF1-204ENST00000596360 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
CRLF1-204ENST00000596360 MAP3K2Q9Y2U5 619 aa20.54■□□□□ 0.88
CRLF1-204ENST00000596360 ADCY9O60503 1353 aa20.54■□□□□ 0.88
CRLF1-204ENST00000596360 TNRC6CQ9HCJ0 1690 aaKnown RBP20.54■□□□□ 0.88
CRLF1-204ENST00000596360 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
CRLF1-204ENST00000596360 MYD88Q99836 296 aa20.53■□□□□ 0.88
CRLF1-204ENST00000596360 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
CRLF1-204ENST00000596360 ARHGAP27Q6ZUM4 889 aa20.52■□□□□ 0.88
CRLF1-204ENST00000596360 CCDC191Q8NCU4 936 aa20.52■□□□□ 0.88
CRLF1-204ENST00000596360 NLRP3Q96P20 1036 aa20.52■□□□□ 0.88
CRLF1-204ENST00000596360 HOXA10P31260 410 aaPredicted RBP20.51■□□□□ 0.87
CRLF1-204ENST00000596360 FKBP5Q13451 457 aaPredicted RBP20.51■□□□□ 0.87
CRLF1-204ENST00000596360 CT47B1P0C2W7 299 aaPredicted RBP20.5■□□□□ 0.87
CRLF1-204ENST00000596360 ALDH1B1P30837 517 aa20.5■□□□□ 0.87
CRLF1-204ENST00000596360 NEXNQ0ZGT2 675 aa20.5■□□□□ 0.87
CRLF1-204ENST00000596360 SYNE4Q8N205 404 aa20.5■□□□□ 0.87
CRLF1-204ENST00000596360 SLX4Q8IY92 1834 aa20.5■□□□□ 0.87
CRLF1-204ENST00000596360 PRPF40BQ6NWY9 871 aaKnown RBP20.49■□□□□ 0.87
CRLF1-204ENST00000596360 ZBTB38Q8NAP3 1195 aaPredicted RBP20.49■□□□□ 0.87
CRLF1-204ENST00000596360 RPGRQ92834 1020 aaKnown RBP20.49■□□□□ 0.87
CRLF1-204ENST00000596360 FAM89AQ96GI7 184 aa20.49■□□□□ 0.87
CRLF1-204ENST00000596360 CWC25Q9NXE8 425 aaPredicted RBP20.49■□□□□ 0.87
CRLF1-204ENST00000596360 UTRNP46939 3433 aa20.48■□□□□ 0.87
CRLF1-204ENST00000596360 IGKV5-2P06315 115 aa20.48■□□□□ 0.87
CRLF1-204ENST00000596360 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
CRLF1-204ENST00000596360 C3orf67Q6ZVT6 689 aa20.48■□□□□ 0.87
CRLF1-204ENST00000596360 DNAAF4Q8WXU2 420 aa20.48■□□□□ 0.87
CRLF1-204ENST00000596360 GOLGB1Q14789 3259 aaKnown RBP20.48■□□□□ 0.87
CRLF1-204ENST00000596360 CACNA1SQ13698 1873 aa20.47■□□□□ 0.87
CRLF1-204ENST00000596360 C21orf2O43822 256 aa20.47■□□□□ 0.87
CRLF1-204ENST00000596360 PCCAP05165 728 aaPredicted RBP20.47■□□□□ 0.87
CRLF1-204ENST00000596360 SOGA3Q5TF21 947 aa20.47■□□□□ 0.87
CRLF1-204ENST00000596360 MRPL50Q8N5N7 158 aaKnown RBP20.47■□□□□ 0.87
CRLF1-204ENST00000596360 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
CRLF1-204ENST00000596360 RBM17Q96I25 401 aaKnown RBP20.47■□□□□ 0.87
CRLF1-204ENST00000596360 CRAMP1Q96RY5 1269 aa20.47■□□□□ 0.87
CRLF1-204ENST00000596360 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
CRLF1-204ENST00000596360 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
CRLF1-204ENST00000596360 DDX60Q8IY21 1712 aaKnown RBP20.46■□□□□ 0.87
CRLF1-204ENST00000596360 LAMB2P55268 1798 aa20.46■□□□□ 0.87
CRLF1-204ENST00000596360 NEURL1BA8MQ27 555 aa20.45■□□□□ 0.86
CRLF1-204ENST00000596360 IRS4O14654 1257 aaPredicted RBP20.45■□□□□ 0.86
CRLF1-204ENST00000596360 HSP90B1P14625 803 aaKnown RBP20.45■□□□□ 0.86
CRLF1-204ENST00000596360 LINS1Q8NG48 757 aa20.45■□□□□ 0.86
CRLF1-204ENST00000596360 SF3B3Q15393 1217 aaKnown RBP20.44■□□□□ 0.86
CRLF1-204ENST00000596360 CWF19L2Q2TBE0 894 aaKnown RBP20.44■□□□□ 0.86
CRLF1-204ENST00000596360 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
CRLF1-204ENST00000596360 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
CRLF1-204ENST00000596360 ZBED9Q6R2W3 1325 aa20.44■□□□□ 0.86
CRLF1-204ENST00000596360 FER1L6Q2WGJ9 1857 aa20.43■□□□□ 0.86
CRLF1-204ENST00000596360 CDHR2Q9BYE9 1310 aa20.43■□□□□ 0.86
CRLF1-204ENST00000596360 SBF1O95248 1867 aa20.43■□□□□ 0.86
CRLF1-204ENST00000596360 F6X3S4 739 aa20.42■□□□□ 0.86
CRLF1-204ENST00000596360 NFKBIEO00221 500 aa20.42■□□□□ 0.86
CRLF1-204ENST00000596360 LTBP3Q9NS15 1303 aa20.42■□□□□ 0.86
CRLF1-204ENST00000596360 H7C1W4 665 aa20.41■□□□□ 0.86
CRLF1-204ENST00000596360 GCKRQ14397 625 aa20.41■□□□□ 0.86
CRLF1-204ENST00000596360 CCDC93Q567U6 631 aa20.41■□□□□ 0.86
CRLF1-204ENST00000596360 BEND3Q5T5X7 828 aa20.41■□□□□ 0.86
CRLF1-204ENST00000596360 CC2D2BQ6DHV5 1058 aa20.41■□□□□ 0.86
CRLF1-204ENST00000596360 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
CRLF1-204ENST00000596360 PTPRCP08575 1304 aa20.41■□□□□ 0.86
CRLF1-204ENST00000596360 ABCC4O15439 1325 aa20.4■□□□□ 0.86
CRLF1-204ENST00000596360 PDE8AO60658 829 aa20.4■□□□□ 0.86
CRLF1-204ENST00000596360 BBOX1O75936 387 aa20.4■□□□□ 0.86
CRLF1-204ENST00000596360 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
CRLF1-204ENST00000596360 RASSF7Q02833 373 aa20.4■□□□□ 0.86
CRLF1-204ENST00000596360 C9orf131Q5VYM1 1079 aa20.4■□□□□ 0.86
CRLF1-204ENST00000596360 SMC4Q9NTJ3 1288 aa20.4■□□□□ 0.86
CRLF1-204ENST00000596360 PPEF1O14829 653 aaPredicted RBP20.39■□□□□ 0.85
CRLF1-204ENST00000596360 LMNB1P20700 586 aa20.39■□□□□ 0.85
CRLF1-204ENST00000596360 GRIPAP1Q4V328 841 aa20.39■□□□□ 0.85
CRLF1-204ENST00000596360 RTKN2Q8IZC4 609 aa20.39■□□□□ 0.85
CRLF1-204ENST00000596360 ZNF784Q8NCA9 323 aaPredicted RBP20.39■□□□□ 0.85
CRLF1-204ENST00000596360 JARID2Q92833 1246 aaPredicted RBP20.39■□□□□ 0.85
CRLF1-204ENST00000596360 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
CRLF1-204ENST00000596360 GRAPQ13588 217 aa20.38■□□□□ 0.85
CRLF1-204ENST00000596360 GRAPLQ8TC17 118 aaPredicted RBP20.38■□□□□ 0.85
CRLF1-204ENST00000596360 TAOK3Q9H2K8 898 aa20.38■□□□□ 0.85
CRLF1-204ENST00000596360 RNF181Q9P0P0 153 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 573.6 ms