RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
LIG1-207ENST00000594759 PPP2R5AQ15172 486 aa14.27□□□□□ -0.13
LIG1-207ENST00000594759 PROSER2Q86WR7 435 aaPredicted RBP14.27□□□□□ -0.13
LIG1-207ENST00000594759 MAGI2Q86UL8 1455 aa14.27□□□□□ -0.13
LIG1-207ENST00000594759 IPO7O95373 1038 aaKnown RBP14.26□□□□□ -0.13
LIG1-207ENST00000594759 SLFNL1Q499Z3 407 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 CEP57Q86XR8 500 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 PLCD4Q9BRC7 762 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 ZCCHC17Q9NP64 241 aaKnown RBP14.26□□□□□ -0.13
LIG1-207ENST00000594759 MIS18AQ9NYP9 233 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 ZDHHC9Q9Y397 364 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 SEC31AO94979 1220 aaKnown RBP14.26□□□□□ -0.13
LIG1-207ENST00000594759 MAP9Q49MG5 647 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 GOLGA6L9A6NEM1 432 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 WASLO00401 505 aaPredicted RBP14.26□□□□□ -0.13
LIG1-207ENST00000594759 PDE1AP54750 535 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 PPP2R3AQ06190 1150 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 STK38Q15208 465 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 C1orf141Q5JVX7 400 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 NEBLO76041 1014 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 CYP2E1P05181 493 aaPredicted RBP14.26□□□□□ -0.13
LIG1-207ENST00000594759 GUCY2CP25092 1073 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 MCTP2Q6DN12 878 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 AOPEPQ8N6M6 819 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 SMARCE1Q969G3 411 aa14.26□□□□□ -0.13
LIG1-207ENST00000594759 SRGAP3O43295 1099 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 KIF5CO60282 957 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 ERC1Q8IUD2 1116 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 EXOC4Q96A65 974 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 KCNF1Q9H3M0 494 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 GBP2P32456 591 aaPredicted RBP14.25□□□□□ -0.13
LIG1-207ENST00000594759 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
LIG1-207ENST00000594759 ANKRD65E5RJM6 399 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 FYB1O15117 783 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 ATP8B1O43520 1251 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 BLOC1S2Q6QNY1 142 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 MICALCLQ6ZW33 695 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 OTUD6BQ8N6M0 293 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 TSPYL6Q8N831 410 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 FCHSD2O94868 740 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 GNAI3P08754 354 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 LIG1P18858 919 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 LRRFIP1Q32MZ4 808 aaKnown RBP14.24□□□□□ -0.13
LIG1-207ENST00000594759 MRPL50Q8N5N7 158 aaKnown RBP14.24□□□□□ -0.13
LIG1-207ENST00000594759 ANKRD44Q8N8A2 993 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 IL16Q14005 1332 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 IFIT2P09913 472 aaKnown RBP14.24□□□□□ -0.13
LIG1-207ENST00000594759 EIF5P55010 431 aaKnown RBP14.24□□□□□ -0.13
LIG1-207ENST00000594759 SRLQ86TD4 932 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 NECAB1Q8N987 351 aa14.24□□□□□ -0.13
LIG1-207ENST00000594759 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
LIG1-207ENST00000594759 INPP5BP32019 993 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
LIG1-207ENST00000594759 PPFIBP1Q86W92 1011 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 CXorf56Q9H5V9 222 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 HOOK1Q9UJC3 728 aaKnown RBP14.23□□□□□ -0.13
LIG1-207ENST00000594759 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 SPG7Q9UQ90 795 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 A0A1B0GUA9 196 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 BIN1O00499 593 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 ATF3P18847 181 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 LIG3P49916 1009 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 MMS22LQ6ZRQ5 1243 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 RAI14Q9P0K7 980 aa14.23□□□□□ -0.13
LIG1-207ENST00000594759 FAM173BQ6P4H8 233 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 MCM10Q7L590 875 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 GPR161Q8N6U8 529 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 UBTFL1P0CB47 393 aaPredicted RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 ZNF853P0CG23 659 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 EZRP15311 586 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 MEIS3Q99687 375 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 GOLGA6L7A0A1B0GV03 622 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 EIF3CLB5ME19 914 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 CCAR1Q8IX12 1150 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 EIF3CQ99613 913 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 NPC1L1Q9UHC9 1359 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 AK2P54819 239 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 ETF1P62495 437 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 ISM2Q6H9L7 571 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 IFNKQ9P0W0 207 aa14.22□□□□□ -0.13
LIG1-207ENST00000594759 PUF60Q9UHX1 559 aaKnown RBP14.22□□□□□ -0.13
LIG1-207ENST00000594759 SAMD9LQ8IVG5 1584 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 EFCAB8A8MWE9 144 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 EFCAB13Q8IY85 973 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 TTC37Q6PGP7 1564 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 CCDC196A0A1B0GTZ2 297 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 VAMP4O75379 141 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 NAA25Q14CX7 972 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 FSIP1Q8NA03 581 aa14.21□□□□□ -0.13
LIG1-207ENST00000594759 F6X3S4 739 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms