RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 TEFQ10587 303 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 MTHFSDQ2M296 383 aaKnown RBP9.45□□□□□ -0.9
SMAD4-210ENST00000590061 LARP1Q6PKG0 1096 aaKnown RBP9.45□□□□□ -0.9
SMAD4-210ENST00000590061 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-210ENST00000590061 DCAF5Q96JK2 942 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 C8orf37Q96NL8 207 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 USP21Q9UK80 565 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 CCDC9Q9Y3X0 531 aaKnown RBP9.45□□□□□ -0.9
SMAD4-210ENST00000590061 SLIT2O94813 1529 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
SMAD4-210ENST00000590061 TAF7Q15545 349 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-210ENST00000590061 SPATA31A1Q5TZJ5 1347 aa9.44□□□□□ -0.9
SMAD4-210ENST00000590061 SPATA31A5Q5VU36 1347 aa9.44□□□□□ -0.9
SMAD4-210ENST00000590061 SPATA31A7Q8IWB4 1347 aa9.44□□□□□ -0.9
SMAD4-210ENST00000590061 RGPD5Q99666 1765 aa9.43□□□□□ -0.9
SMAD4-210ENST00000590061 NEFLP07196 543 aa9.43□□□□□ -0.9
SMAD4-210ENST00000590061 MS4A1P11836 297 aa9.43□□□□□ -0.9
SMAD4-210ENST00000590061 TRMT2AQ8IZ69 625 aaKnown RBP9.43□□□□□ -0.9
SMAD4-210ENST00000590061 CCDC102AQ96A19 550 aa9.43□□□□□ -0.9
SMAD4-210ENST00000590061 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.43□□□□□ -0.9
SMAD4-210ENST00000590061 PODXL2Q9NZ53 605 aa9.43□□□□□ -0.9
SMAD4-210ENST00000590061 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-210ENST00000590061 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
SMAD4-210ENST00000590061 USHBP1Q8N6Y0 703 aa9.42□□□□□ -0.9
SMAD4-210ENST00000590061 RRP7AQ9Y3A4 280 aaKnown RBP9.42□□□□□ -0.9
SMAD4-210ENST00000590061 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
SMAD4-210ENST00000590061 HOXB7P09629 217 aa9.41□□□□□ -0.9
SMAD4-210ENST00000590061 PHKG2P15735 406 aa9.41□□□□□ -0.9
SMAD4-210ENST00000590061 DDB1Q16531 1140 aa9.41□□□□□ -0.9
SMAD4-210ENST00000590061 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.41□□□□□ -0.9
SMAD4-210ENST00000590061 KAT6BQ8WYB5 2073 aa9.41□□□□□ -0.9
SMAD4-210ENST00000590061 CEMIPQ8WUJ3 1361 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 AFF2P51816 1311 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 PLCH1Q4KWH8 1693 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 CHL1O00533 1208 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 IPO8O15397 1037 aaKnown RBP9.4□□□□□ -0.9
SMAD4-210ENST00000590061 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 GCGRP47871 477 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 RDH13Q8NBN7 331 aa9.4□□□□□ -0.9
SMAD4-210ENST00000590061 GJD4Q96KN9 370 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-210ENST00000590061 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
SMAD4-210ENST00000590061 ADH1BP00325 375 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 CABP4P57796 275 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 PUS10Q3MIT2 529 aaKnown RBP9.39□□□□□ -0.91
SMAD4-210ENST00000590061 ERICH6BQ5W0A0 696 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 CHMP4BQ9H444 224 aaKnown RBP9.39□□□□□ -0.91
SMAD4-210ENST00000590061 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 RCAN3Q9UKA8 241 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 BCL9LQ86UU0 1499 aa9.39□□□□□ -0.91
SMAD4-210ENST00000590061 LRP6O75581 1613 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 NR1I2O75469 434 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 CD46P15529 392 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 FUT2Q10981 343 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 ALDH1L2Q3SY69 923 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 MORN1Q5T089 497 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 TTC5Q8N0Z6 440 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 EMID1Q96A84 441 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-210ENST00000590061 TEX13AQ9BXU3 409 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-210ENST00000590061 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-210ENST00000590061 QTRT2Q9H974 415 aaKnown RBP9.38□□□□□ -0.91
SMAD4-210ENST00000590061 SLC52A2Q9HAB3 445 aa9.38□□□□□ -0.91
SMAD4-210ENST00000590061 LAS1LQ9Y4W2 734 aaKnown RBP9.38□□□□□ -0.91
SMAD4-210ENST00000590061 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 MEGF6O75095 1541 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 PKD1L3Q7Z443 1732 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 DLG5Q8TDM6 1919 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 BTBD11A6QL63 1104 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 ZMYND10O75800 440 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 RBM6P78332 1123 aaKnown RBP9.37□□□□□ -0.91
SMAD4-210ENST00000590061 AAMPQ13685 434 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 MCM10Q7L590 875 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 SCUBE3Q8IX30 993 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 IL17REQ8NFR9 667 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
SMAD4-210ENST00000590061 PRKD2Q9BZL6 878 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-210ENST00000590061 DISP2A7MBM2 1401 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 TNS2Q63HR2 1409 aa9.37□□□□□ -0.91
SMAD4-210ENST00000590061 NRAPQ86VF7 1730 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 FANCIQ9NVI1 1328 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 CYP27B1O15528 508 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-210ENST00000590061 MPRIPQ6WCQ1 1025 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
SMAD4-210ENST00000590061 SMARCC1Q92922 1105 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-210ENST00000590061 THAP11Q96EK4 314 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 STK31Q9BXU1 1019 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 TMOD3Q9NYL9 352 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 ATRNO75882 1429 aa9.36□□□□□ -0.91
SMAD4-210ENST00000590061 KIF16BQ96L93 1317 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 BCL9O00512 1426 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 S1PR4O95977 384 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 GGCXP38435 758 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 BRPF1P55201 1214 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms