RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 EVA1CP58658 441 aa23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 PTPN12Q05209 780 aaKnown RBP23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 RASEFQ8IZ41 740 aa23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 FAM43AQ8N2R8 423 aa23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 CCDC171Q6TFL3 1326 aa23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 PAPPAQ13219 1627 aa23.06■■□□□ 1.28
PRKCSH-209ENST00000589838 WDR33Q9C0J8 1336 aaKnown RBP23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 ATP5J2-PTCD1G3V325 749 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 PRPF40AO75400 957 aaKnown RBP23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 CASP7P55210 303 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 PTH1RQ03431 593 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 KLHDC4Q8TBB5 520 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 FSD1Q9BTV5 496 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 BOLA2Q9H3K6 86 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 NBPF26B4DH59 902 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 H7C1W4 665 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 ATP5JP18859 108 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 NBPF14Q5TI25 921 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 NBPF10Q6P3W6 841 aaKnown RBP23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 NBPF15Q8N660 670 aa23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 ZSCAN31Q96LW9 406 aaPredicted RBP23.05■■□□□ 1.28
PRKCSH-209ENST00000589838 NCLP19338 710 aaKnown RBP23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 CASTP20810 708 aaKnown RBP23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 AK2P54819 239 aa23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 NMIQ13287 307 aaPredicted RBP23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 TNNI3KQ59H18 835 aa23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 VPS53Q5VIR6 699 aa23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 CWC25Q9NXE8 425 aaPredicted RBP23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 TLR7Q9NYK1 1049 aaKnown RBP23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 CYP46A1Q9Y6A2 500 aa23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 FPGT-TNNI3KV9GXZ4 949 aa23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
PRKCSH-209ENST00000589838 KCNJ4P48050 445 aa23.03■■□□□ 1.28
PRKCSH-209ENST00000589838 NECTIN1Q15223 517 aa23.03■■□□□ 1.28
PRKCSH-209ENST00000589838 PRPF40BQ6NWY9 871 aaKnown RBP23.03■■□□□ 1.28
PRKCSH-209ENST00000589838 MAP4K1Q92918 833 aa23.03■■□□□ 1.28
PRKCSH-209ENST00000589838 NUP188Q5SRE5 1749 aa23.03■■□□□ 1.28
PRKCSH-209ENST00000589838 ZNF445P59923 1031 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 RNF20Q5VTR2 975 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 ZSWIM6Q9HCJ5 1215 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 RTN4Q9NQC3 1192 aaKnown RBP23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 ZNF335Q9H4Z2 1342 aaPredicted RBP23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 MBD3O95983 291 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 PSMA5P28066 241 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 TFCP2Q12800 502 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 GAS2L3Q86XJ1 694 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 DDX54Q8TDD1 881 aaKnown RBP23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 JAKMIP1Q96N16 626 aaKnown RBP23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 PDRG1Q9NUG6 133 aa23.02■■□□□ 1.28
PRKCSH-209ENST00000589838 RFX7Q2KHR2 1363 aa23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 CCDC191Q8NCU4 936 aa23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 JARID2Q92833 1246 aaPredicted RBP23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 PANK2Q9BZ23 570 aa23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 SH2B1Q9NRF2 756 aaPredicted RBP23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 STRN4Q9NRL3 753 aa23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 RBM8AQ9Y5S9 174 aaKnown RBP23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 NHSL1Q5SYE7 1610 aa23.01■■□□□ 1.27
PRKCSH-209ENST00000589838 TNS2Q63HR2 1409 aa23■■□□□ 1.27
PRKCSH-209ENST00000589838 LMBR1LQ6UX01 489 aa23■■□□□ 1.27
PRKCSH-209ENST00000589838 FAM227BQ96M60 508 aa23■■□□□ 1.27
PRKCSH-209ENST00000589838 CREB3L3Q68CJ9 461 aa23■■□□□ 1.27
PRKCSH-209ENST00000589838 CAVIN1Q6NZI2 390 aaKnown RBP23■■□□□ 1.27
PRKCSH-209ENST00000589838 RUFY3Q7L099 469 aa23■■□□□ 1.27
PRKCSH-209ENST00000589838 FOXO4P98177 505 aa22.99■■□□□ 1.27
PRKCSH-209ENST00000589838 TTLL7Q6ZT98 887 aa22.99■■□□□ 1.27
PRKCSH-209ENST00000589838 TEX13AQ9BXU3 409 aaPredicted RBP22.99■■□□□ 1.27
PRKCSH-209ENST00000589838 DBNLQ9UJU6 430 aaKnown RBP22.99■■□□□ 1.27
PRKCSH-209ENST00000589838 A1BGP04217 495 aa22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 FOXD4L5Q5VV16 416 aaPredicted RBP22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 FOXD4L4Q8WXT5 416 aaPredicted RBP22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 GPR108Q9NPR9 543 aa22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 TICAM2Q86XR7 235 aa22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 HMG20BQ9P0W2 317 aa22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 SMC3Q9UQE7 1217 aa22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 MED23Q9ULK4 1368 aa22.98■■□□□ 1.27
PRKCSH-209ENST00000589838 ZSCAN23Q3MJ62 389 aa22.97■■□□□ 1.27
PRKCSH-209ENST00000589838 A0A0D9SFI3 127 aa22.96■■□□□ 1.27
PRKCSH-209ENST00000589838 ATG3Q9NT62 314 aa22.96■■□□□ 1.27
PRKCSH-209ENST00000589838 CHMP3Q9Y3E7 222 aa22.96■■□□□ 1.27
PRKCSH-209ENST00000589838 SLC27A2O14975 620 aa22.96■■□□□ 1.27
PRKCSH-209ENST00000589838 PDIA4P13667 645 aaKnown RBP22.96■■□□□ 1.27
PRKCSH-209ENST00000589838 GPT2Q8TD30 523 aa22.96■■□□□ 1.27
PRKCSH-209ENST00000589838 ANP32BQ92688 251 aaKnown RBP22.96■■□□□ 1.27
PRKCSH-209ENST00000589838 IL15P40933 162 aaPredicted RBP22.95■■□□□ 1.26
PRKCSH-209ENST00000589838 ANKRD1Q15327 319 aa22.95■■□□□ 1.26
PRKCSH-209ENST00000589838 ADCK5Q3MIX3 580 aa22.95■■□□□ 1.26
PRKCSH-209ENST00000589838 VSIG10Q8N0Z9 540 aa22.95■■□□□ 1.26
PRKCSH-209ENST00000589838 HAUS7Q99871 368 aa22.95■■□□□ 1.26
PRKCSH-209ENST00000589838 TJP1Q07157 1748 aa22.95■■□□□ 1.26
PRKCSH-209ENST00000589838 JCADQ9P266 1359 aa22.95■■□□□ 1.26
PRKCSH-209ENST00000589838 TSGA10IPQ3SY00 556 aa22.94■■□□□ 1.26
PRKCSH-209ENST00000589838 ALDH8A1Q9H2A2 487 aaPredicted RBP22.94■■□□□ 1.26
PRKCSH-209ENST00000589838 ATP6V1DQ9Y5K8 247 aa22.94■■□□□ 1.26
PRKCSH-209ENST00000589838 RPAP1Q9BWH6 1393 aaPredicted RBP22.94■■□□□ 1.26
PRKCSH-209ENST00000589838 ZBTB3Q9H5J0 574 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms