RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-214ENST00000589677 GOLIM4O00461 696 aa16.79■□□□□ 0.28
SMARCA4-214ENST00000589677 CETN2P41208 172 aa16.79■□□□□ 0.28
SMARCA4-214ENST00000589677 FAM114A1Q8IWE2 563 aa16.79■□□□□ 0.28
SMARCA4-214ENST00000589677 ATRIPQ8WXE1 791 aa16.79■□□□□ 0.28
SMARCA4-214ENST00000589677 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-214ENST00000589677 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 CYLC1P35663 651 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 DMTNQ08495 405 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 CEP57Q86XR8 500 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 RTEL1-TNFRSF6BF6WH68 1400 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 GOLGA8BA8MQT2 603 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 SPAG1Q07617 926 aa16.78■□□□□ 0.28
SMARCA4-214ENST00000589677 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 SSRP1Q08945 709 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 TDRD12Q587J7 1177 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 FBXO3Q9UK99 471 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 A0A1B0GUA9 196 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 N4BP3O15049 544 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 RAPGEF3O95398 923 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 EVCP57679 992 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 ARFGAP2Q8N6H7 521 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 FAM76AQ8TAV0 307 aa16.77■□□□□ 0.28
SMARCA4-214ENST00000589677 TUBB2AQ13885 445 aa16.77■□□□□ 0.27
SMARCA4-214ENST00000589677 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.27
SMARCA4-214ENST00000589677 RSRC1Q96IZ7 334 aaKnown RBP16.77■□□□□ 0.27
SMARCA4-214ENST00000589677 TUBB2BQ9BVA1 445 aa16.77■□□□□ 0.27
SMARCA4-214ENST00000589677 BCL2L12Q9HB09 334 aa16.77■□□□□ 0.27
SMARCA4-214ENST00000589677 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.27
SMARCA4-214ENST00000589677 USP26Q9BXU7 913 aa16.77■□□□□ 0.27
SMARCA4-214ENST00000589677 PPP1R12BO60237 982 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 A6NNZ2 444 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 TUBB8Q3ZCM7 444 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 B4GALNT4Q76KP1 1039 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 MCM10Q7L590 875 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 F6X3S4 739 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 SSBP05455 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■■■■■ 30.1
SMARCA4-214ENST00000589677 MTIF2P46199 727 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 ABTB2Q8N961 1025 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 NECAB1Q8N987 351 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 AIDAQ96BJ3 306 aa16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-214ENST00000589677 RRS1Q15050 365 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 ISM2Q6H9L7 571 aa16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 NUTM2GQ5VZR2 741 aa16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 CCDC114Q96M63 670 aa16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 AKAP2Q9Y2D5 859 aa16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 C6orf163Q5TEZ5 329 aa16.75■□□□□ 0.27
SMARCA4-214ENST00000589677 ATP2C2O75185 946 aa16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 IFI16Q16666 785 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 DNA2P51530 1060 aa16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 GSTTP1A0A1W2PQM5 241 aa16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 ZNF213O14771 459 aa16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 CCDC155Q8N6L0 562 aa16.74■□□□□ 0.27
SMARCA4-214ENST00000589677 KRT83P78385 493 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 CCDC8Q9H0W5 538 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 LMBRD1Q9NUN5 540 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 MKRN1Q9UHC7 482 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 DNAJC21Q5F1R6 531 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 RMND1Q9NWS8 449 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 VGLL3A8MV65 326 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 IFIT1P09914 478 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 FLIIQ13045 1269 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 ELF2Q15723 593 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 MBIPQ9NS73 344 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
SMARCA4-214ENST00000589677 FSD2A1L4K1 749 aa16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 PHACTR2O75167 634 aa16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 TACC1O75410 805 aa16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 ATF3P18847 181 aa16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 IARSP41252 1262 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 IKQ13123 557 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 CCDC129Q6ZRS4 1044 aa16.72■□□□□ 0.27
SMARCA4-214ENST00000589677 MYL6BP14649 208 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms