RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 ATP5J2-PTCD1G3V325 749 aa21.23■□□□□ 0.99
ERCC2-211ENST00000588652 PTCD1O75127 700 aaKnown RBP21.23■□□□□ 0.99
ERCC2-211ENST00000588652 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
ERCC2-211ENST00000588652 CLCN1P35523 988 aa21.23■□□□□ 0.99
ERCC2-211ENST00000588652 UBE3BQ7Z3V4 1068 aa21.23■□□□□ 0.99
ERCC2-211ENST00000588652 JARID2Q92833 1246 aaPredicted RBP21.23■□□□□ 0.99
ERCC2-211ENST00000588652 LSG1Q9H089 658 aaKnown RBP21.23■□□□□ 0.99
ERCC2-211ENST00000588652 RABL6Q3YEC7 729 aaPredicted RBP21.21■□□□□ 0.99
ERCC2-211ENST00000588652 A0A087WZG4 1122 aa21.21■□□□□ 0.99
ERCC2-211ENST00000588652 ZNF445P59923 1031 aa21.21■□□□□ 0.99
ERCC2-211ENST00000588652 CCDC8Q9H0W5 538 aaPredicted RBP21.21■□□□□ 0.99
ERCC2-211ENST00000588652 COPRSQ9NQ92 184 aa21.21■□□□□ 0.99
ERCC2-211ENST00000588652 CUL4AQ13619 759 aa21.2■□□□□ 0.99
ERCC2-211ENST00000588652 EVI5LQ96CN4 794 aa21.2■□□□□ 0.99
ERCC2-211ENST00000588652 DIAPH3Q9NSV4 1193 aa21.2■□□□□ 0.99
ERCC2-211ENST00000588652 RFX5P48382 616 aaPredicted RBP21.2■□□□□ 0.98
ERCC2-211ENST00000588652 CASP7P55210 303 aa21.2■□□□□ 0.98
ERCC2-211ENST00000588652 UPF3BQ9BZI7 483 aaKnown RBP21.2■□□□□ 0.98
ERCC2-211ENST00000588652 TLR7Q9NYK1 1049 aaKnown RBP21.2■□□□□ 0.98
ERCC2-211ENST00000588652 CAVIN1Q6NZI2 390 aaKnown RBP21.19■□□□□ 0.98
ERCC2-211ENST00000588652 TAOK2Q9UL54 1235 aa21.19■□□□□ 0.98
ERCC2-211ENST00000588652 TNS2Q63HR2 1409 aa21.19■□□□□ 0.98
ERCC2-211ENST00000588652 NUP188Q5SRE5 1749 aa21.19■□□□□ 0.98
ERCC2-211ENST00000588652 A1BGP04217 495 aa21.19■□□□□ 0.98
ERCC2-211ENST00000588652 PTPN12Q05209 780 aaKnown RBP21.19■□□□□ 0.98
ERCC2-211ENST00000588652 KIAA1211Q6ZU35 1233 aa21.19■□□□□ 0.98
ERCC2-211ENST00000588652 RUFY2Q8WXA3 655 aa21.19■□□□□ 0.98
ERCC2-211ENST00000588652 TOGARAM1Q9Y4F4 1720 aa21.19■□□□□ 0.98
ERCC2-211ENST00000588652 TTLL7Q6ZT98 887 aa21.18■□□□□ 0.98
ERCC2-211ENST00000588652 PRPF40AO75400 957 aaKnown RBP21.18■□□□□ 0.98
ERCC2-211ENST00000588652 NCLP19338 710 aaKnown RBP21.18■□□□□ 0.98
ERCC2-211ENST00000588652 NASPP49321 788 aaPredicted RBP21.18■□□□□ 0.98
ERCC2-211ENST00000588652 ZSCAN23Q3MJ62 389 aa21.18■□□□□ 0.98
ERCC2-211ENST00000588652 SNX14Q9Y5W7 946 aa21.17■□□□□ 0.98
ERCC2-211ENST00000588652 GPT2Q8TD30 523 aa21.17■□□□□ 0.98
ERCC2-211ENST00000588652 ESPNB1AK53 854 aa21.16■□□□□ 0.98
ERCC2-211ENST00000588652 CHAMP1Q96JM3 812 aa21.16■□□□□ 0.98
ERCC2-211ENST00000588652 H7C1W4 665 aa21.15■□□□□ 0.98
ERCC2-211ENST00000588652 CCDC173Q0VFZ6 552 aa21.15■□□□□ 0.98
ERCC2-211ENST00000588652 RASEFQ8IZ41 740 aa21.15■□□□□ 0.98
ERCC2-211ENST00000588652 TRIM44Q96DX7 344 aaPredicted RBP21.15■□□□□ 0.98
ERCC2-211ENST00000588652 INTS4Q96HW7 963 aaKnown RBP21.15■□□□□ 0.98
ERCC2-211ENST00000588652 PPP1R9BQ96SB3 815 aa21.15■□□□□ 0.98
ERCC2-211ENST00000588652 BRD1O95696 1058 aa21.15■□□□□ 0.98
ERCC2-211ENST00000588652 NOL8Q76FK4 1167 aaKnown RBP21.15■□□□□ 0.98
ERCC2-211ENST00000588652 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
ERCC2-211ENST00000588652 BOLA2Q9H3K6 86 aa21.14■□□□□ 0.97
ERCC2-211ENST00000588652 TJP1Q07157 1748 aa21.14■□□□□ 0.97
ERCC2-211ENST00000588652 TMOD3Q9NYL9 352 aa21.14■□□□□ 0.97
ERCC2-211ENST00000588652 PTH1RQ03431 593 aa21.13■□□□□ 0.97
ERCC2-211ENST00000588652 FOXD4L5Q5VV16 416 aaPredicted RBP21.13■□□□□ 0.97
ERCC2-211ENST00000588652 LMBR1LQ6UX01 489 aa21.13■□□□□ 0.97
ERCC2-211ENST00000588652 FOXD4L4Q8WXT5 416 aaPredicted RBP21.13■□□□□ 0.97
ERCC2-211ENST00000588652 ANP32BQ92688 251 aaKnown RBP21.13■□□□□ 0.97
ERCC2-211ENST00000588652 CWC25Q9NXE8 425 aaPredicted RBP21.13■□□□□ 0.97
ERCC2-211ENST00000588652 HIP1O00291 1037 aa21.13■□□□□ 0.97
ERCC2-211ENST00000588652 FOXO4P98177 505 aa21.13■□□□□ 0.97
ERCC2-211ENST00000588652 TFCP2Q12800 502 aa21.13■□□□□ 0.97
ERCC2-211ENST00000588652 ZBTB3Q9H5J0 574 aa21.13■□□□□ 0.97
ERCC2-211ENST00000588652 TNNI3KQ59H18 835 aa21.12■□□□□ 0.97
ERCC2-211ENST00000588652 RBM27Q9P2N5 1060 aaKnown RBP21.12■□□□□ 0.97
ERCC2-211ENST00000588652 FPGT-TNNI3KV9GXZ4 949 aa21.12■□□□□ 0.97
ERCC2-211ENST00000588652 DBNLQ9UJU6 430 aaKnown RBP21.12■□□□□ 0.97
ERCC2-211ENST00000588652 FAM227BQ96M60 508 aa21.11■□□□□ 0.97
ERCC2-211ENST00000588652 TTC14Q96N46 770 aa21.11■□□□□ 0.97
ERCC2-211ENST00000588652 NMIQ13287 307 aaPredicted RBP21.1■□□□□ 0.97
ERCC2-211ENST00000588652 CCDC191Q8NCU4 936 aa21.1■□□□□ 0.97
ERCC2-211ENST00000588652 CCDC171Q6TFL3 1326 aa21.1■□□□□ 0.97
ERCC2-211ENST00000588652 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
ERCC2-211ENST00000588652 SNRKQ9NRH2 765 aa21.09■□□□□ 0.97
ERCC2-211ENST00000588652 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
ERCC2-211ENST00000588652 ATP5JP18859 108 aa21.09■□□□□ 0.97
ERCC2-211ENST00000588652 PIGBQ92521 554 aa21.09■□□□□ 0.97
ERCC2-211ENST00000588652 TMEM63CQ9P1W3 806 aa21.09■□□□□ 0.97
ERCC2-211ENST00000588652 ASAP1Q9ULH1 1129 aa21.09■□□□□ 0.97
ERCC2-211ENST00000588652 ITGB4P16144 1822 aa21.09■□□□□ 0.97
ERCC2-211ENST00000588652 COL14A1Q05707 1796 aaKnown RBP21.09■□□□□ 0.97
ERCC2-211ENST00000588652 NECTIN1Q15223 517 aa21.08■□□□□ 0.97
ERCC2-211ENST00000588652 KCNB2Q92953 911 aa21.08■□□□□ 0.97
ERCC2-211ENST00000588652 RBSNQ9H1K0 784 aa21.08■□□□□ 0.97
ERCC2-211ENST00000588652 PRIM1P49642 420 aaKnown RBP21.08■□□□□ 0.96
ERCC2-211ENST00000588652 PRPF40BQ6NWY9 871 aaKnown RBP21.08■□□□□ 0.96
ERCC2-211ENST00000588652 CHMP3Q9Y3E7 222 aa21.08■□□□□ 0.96
ERCC2-211ENST00000588652 A0A0D9SFI3 127 aa21.07■□□□□ 0.96
ERCC2-211ENST00000588652 TULP1O00294 542 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-211ENST00000588652 DISP2A7MBM2 1401 aa21.07■□□□□ 0.96
ERCC2-211ENST00000588652 AK2P54819 239 aa21.07■□□□□ 0.96
ERCC2-211ENST00000588652 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
ERCC2-211ENST00000588652 MAP4K1Q92918 833 aa21.07■□□□□ 0.96
ERCC2-211ENST00000588652 ROBO1Q9Y6N7 1651 aa21.06■□□□□ 0.96
ERCC2-211ENST00000588652 MBD3O95983 291 aa21.06■□□□□ 0.96
ERCC2-211ENST00000588652 CASTP20810 708 aaKnown RBP21.06■□□□□ 0.96
ERCC2-211ENST00000588652 ADCK5Q3MIX3 580 aa21.06■□□□□ 0.96
ERCC2-211ENST00000588652 EDC3Q96F86 508 aaKnown RBP21.06■□□□□ 0.96
ERCC2-211ENST00000588652 DBNDD2Q9BQY9 259 aa21.06■□□□□ 0.96
ERCC2-211ENST00000588652 TEX13AQ9BXU3 409 aaPredicted RBP21.06■□□□□ 0.96
ERCC2-211ENST00000588652 ATG3Q9NT62 314 aa21.06■□□□□ 0.96
ERCC2-211ENST00000588652 RBM8AQ9Y5S9 174 aaKnown RBP21.06■□□□□ 0.96
ERCC2-211ENST00000588652 ATG9AQ7Z3C6 839 aa21.05■□□□□ 0.96
ERCC2-211ENST00000588652 DNAJC10Q8IXB1 793 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms