RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 CCDC171Q6TFL3 1326 aa28.07■■■□□ 2.08
R3HDM4-203ENST00000587975 ZNF445P59923 1031 aa28.06■■■□□ 2.08
R3HDM4-203ENST00000587975 RASEFQ8IZ41 740 aa28.06■■■□□ 2.08
R3HDM4-203ENST00000587975 LIMCH1Q9UPQ0 1083 aa28.06■■■□□ 2.08
R3HDM4-203ENST00000587975 TICAM2Q86XR7 235 aa28.06■■■□□ 2.08
R3HDM4-203ENST00000587975 CCDC8Q9H0W5 538 aaPredicted RBP28.06■■■□□ 2.08
R3HDM4-203ENST00000587975 NUP188Q5SRE5 1749 aa28.05■■■□□ 2.08
R3HDM4-203ENST00000587975 A0A087WZG4 1122 aa28.05■■■□□ 2.08
R3HDM4-203ENST00000587975 H7C1W4 665 aa28.05■■■□□ 2.08
R3HDM4-203ENST00000587975 ATP5JP18859 108 aa28.05■■■□□ 2.08
R3HDM4-203ENST00000587975 NECTIN1Q15223 517 aa28.05■■■□□ 2.08
R3HDM4-203ENST00000587975 VPS53Q5VIR6 699 aa28.05■■■□□ 2.08
R3HDM4-203ENST00000587975 SHANK3Q9BYB0 1731 aa28.05■■■□□ 2.08
R3HDM4-203ENST00000587975 UBE3BQ7Z3V4 1068 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 MAP4K1Q92918 833 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 SIL1Q9H173 461 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 WDR33Q9C0J8 1336 aaKnown RBP28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 NHSL1Q5SYE7 1610 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 NBPF26B4DH59 902 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 NBPF14Q5TI25 921 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 NBPF10Q6P3W6 841 aaKnown RBP28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 NBPF15Q8N660 670 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 ZSWIM6Q9HCJ5 1215 aa28.04■■■□□ 2.08
R3HDM4-203ENST00000587975 JCADQ9P266 1359 aa28.03■■■□□ 2.08
R3HDM4-203ENST00000587975 ZSCAN31Q96LW9 406 aaPredicted RBP28.03■■■□□ 2.08
R3HDM4-203ENST00000587975 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.03■■■□□ 2.08
R3HDM4-203ENST00000587975 MED23Q9ULK4 1368 aa28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 MBD3O95983 291 aa28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 ZKSCAN1P17029 563 aaPredicted RBP28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 PTH1RQ03431 593 aa28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 TNNI3KQ59H18 835 aa28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 GAS2L3Q86XJ1 694 aa28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 TLR7Q9NYK1 1049 aaKnown RBP28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 FPGT-TNNI3KV9GXZ4 949 aa28.02■■■□□ 2.08
R3HDM4-203ENST00000587975 AK2P54819 239 aa28.01■■■□□ 2.08
R3HDM4-203ENST00000587975 SH2B1Q9NRF2 756 aaPredicted RBP28.01■■■□□ 2.08
R3HDM4-203ENST00000587975 NMIQ13287 307 aaPredicted RBP28.01■■■□□ 2.07
R3HDM4-203ENST00000587975 CWC25Q9NXE8 425 aaPredicted RBP28.01■■■□□ 2.07
R3HDM4-203ENST00000587975 PRPF40AO75400 957 aaKnown RBP28■■■□□ 2.07
R3HDM4-203ENST00000587975 CCDC191Q8NCU4 936 aa28■■■□□ 2.07
R3HDM4-203ENST00000587975 KLHDC4Q8TBB5 520 aa28■■■□□ 2.07
R3HDM4-203ENST00000587975 FSD1Q9BTV5 496 aa28■■■□□ 2.07
R3HDM4-203ENST00000587975 GPR108Q9NPR9 543 aa28■■■□□ 2.07
R3HDM4-203ENST00000587975 CYP46A1Q9Y6A2 500 aa28■■■□□ 2.07
R3HDM4-203ENST00000587975 CASTP20810 708 aaKnown RBP27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 RUFY3Q7L099 469 aa27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 BOLA2Q9H3K6 86 aa27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 PSMA5P28066 241 aa27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 RNF20Q5VTR2 975 aa27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 PRPF40BQ6NWY9 871 aaKnown RBP27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 PANK2Q9BZ23 570 aa27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 RBM8AQ9Y5S9 174 aaKnown RBP27.99■■■□□ 2.07
R3HDM4-203ENST00000587975 ATP5J2-PTCD1G3V325 749 aa27.98■■■□□ 2.07
R3HDM4-203ENST00000587975 PTCD1O75127 700 aaKnown RBP27.98■■■□□ 2.07
R3HDM4-203ENST00000587975 PIP4K2AP48426 406 aaPredicted RBP27.98■■■□□ 2.07
R3HDM4-203ENST00000587975 NOL8Q76FK4 1167 aaKnown RBP27.98■■■□□ 2.07
R3HDM4-203ENST00000587975 ALDH8A1Q9H2A2 487 aaPredicted RBP27.98■■■□□ 2.07
R3HDM4-203ENST00000587975 HMG20BQ9P0W2 317 aa27.98■■■□□ 2.07
R3HDM4-203ENST00000587975 DBNLQ9UJU6 430 aaKnown RBP27.98■■■□□ 2.07
R3HDM4-203ENST00000587975 RPAP1Q9BWH6 1393 aaPredicted RBP27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 ZNF335Q9H4Z2 1342 aaPredicted RBP27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 PDIA4P13667 645 aaKnown RBP27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 FOXO4P98177 505 aa27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 TSGA10IPQ3SY00 556 aa27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 CREB3L3Q68CJ9 461 aa27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 ATG3Q9NT62 314 aa27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 PDRG1Q9NUG6 133 aa27.97■■■□□ 2.07
R3HDM4-203ENST00000587975 TJP1Q07157 1748 aa27.96■■■□□ 2.07
R3HDM4-203ENST00000587975 TFCP2Q12800 502 aa27.96■■■□□ 2.07
R3HDM4-203ENST00000587975 FAM227BQ96M60 508 aa27.96■■■□□ 2.07
R3HDM4-203ENST00000587975 JAKMIP1Q96N16 626 aaKnown RBP27.96■■■□□ 2.07
R3HDM4-203ENST00000587975 TEX13AQ9BXU3 409 aaPredicted RBP27.96■■■□□ 2.07
R3HDM4-203ENST00000587975 ZSCAN23Q3MJ62 389 aa27.95■■■□□ 2.06
R3HDM4-203ENST00000587975 LMBR1LQ6UX01 489 aa27.95■■■□□ 2.06
R3HDM4-203ENST00000587975 VSIG10Q8N0Z9 540 aa27.95■■■□□ 2.06
R3HDM4-203ENST00000587975 GPT2Q8TD30 523 aa27.95■■■□□ 2.06
R3HDM4-203ENST00000587975 EVA1CP58658 441 aa27.94■■■□□ 2.06
R3HDM4-203ENST00000587975 CAVIN1Q6NZI2 390 aaKnown RBP27.94■■■□□ 2.06
R3HDM4-203ENST00000587975 ARXQ96QS3 562 aa27.94■■■□□ 2.06
R3HDM4-203ENST00000587975 HAUS7Q99871 368 aa27.94■■■□□ 2.06
R3HDM4-203ENST00000587975 A0A0D9SFI3 127 aa27.94■■■□□ 2.06
R3HDM4-203ENST00000587975 TTLL7Q6ZT98 887 aa27.94■■■□□ 2.06
R3HDM4-203ENST00000587975 TMEM87AQ8NBN3 555 aa27.93■■■□□ 2.06
R3HDM4-203ENST00000587975 SLC27A2O14975 620 aa27.92■■■□□ 2.06
R3HDM4-203ENST00000587975 IL15P40933 162 aaPredicted RBP27.92■■■□□ 2.06
R3HDM4-203ENST00000587975 KCNJ4P48050 445 aa27.92■■■□□ 2.06
R3HDM4-203ENST00000587975 ANKRD1Q15327 319 aa27.92■■■□□ 2.06
R3HDM4-203ENST00000587975 USPL1Q5W0Q7 1092 aa27.92■■■□□ 2.06
R3HDM4-203ENST00000587975 TOGARAM1Q9Y4F4 1720 aa27.92■■■□□ 2.06
R3HDM4-203ENST00000587975 TRIM28Q13263 835 aaKnown RBP27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 ADCK5Q3MIX3 580 aa27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 SMC3Q9UQE7 1217 aa27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 CIAO1O76071 339 aa27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 A1BGP04217 495 aa27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 NCLP19338 710 aaKnown RBP27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 DDX54Q8TDD1 881 aaKnown RBP27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 RTN4Q9NQC3 1192 aaKnown RBP27.91■■■□□ 2.06
R3HDM4-203ENST00000587975 KRT32Q14532 448 aa27.9■■■□□ 2.06
R3HDM4-203ENST00000587975 JARID2Q92833 1246 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 603.4 ms