RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 MMP10P09238 476 aa12.7□□□□□ -0.38
APOC1-201ENST00000586638 TGFB2P61812 414 aa12.7□□□□□ -0.38
APOC1-201ENST00000586638 NUCB1Q02818 461 aa12.7□□□□□ -0.38
APOC1-201ENST00000586638 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
APOC1-201ENST00000586638 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
APOC1-201ENST00000586638 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
APOC1-201ENST00000586638 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
APOC1-201ENST00000586638 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
APOC1-201ENST00000586638 NBPF7P0C2Y1 421 aaPredicted RBP12.69□□□□□ -0.38
APOC1-201ENST00000586638 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
APOC1-201ENST00000586638 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
APOC1-201ENST00000586638 LINS1Q8NG48 757 aa12.69□□□□□ -0.38
APOC1-201ENST00000586638 LNPKQ9C0E8 428 aa12.69□□□□□ -0.38
APOC1-201ENST00000586638 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
APOC1-201ENST00000586638 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
APOC1-201ENST00000586638 C4BP0C0L5 1744 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 NUP98P52948 1817 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 HMMRO75330 724 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
APOC1-201ENST00000586638 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 BCORQ6W2J9 1755 aa12.68□□□□□ -0.38
APOC1-201ENST00000586638 CYP19A1P11511 503 aaPredicted RBP12.67□□□□□ -0.38
APOC1-201ENST00000586638 APLP1P51693 650 aa12.67□□□□□ -0.38
APOC1-201ENST00000586638 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
APOC1-201ENST00000586638 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
APOC1-201ENST00000586638 CHD1LQ86WJ1 897 aa12.67□□□□□ -0.38
APOC1-201ENST00000586638 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
APOC1-201ENST00000586638 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
APOC1-201ENST00000586638 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
APOC1-201ENST00000586638 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
APOC1-201ENST00000586638 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 APBB1O00213 710 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 GRM8O00222 908 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 TOMM70O94826 608 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 STARD3NLO95772 234 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 RFC4P35249 363 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
APOC1-201ENST00000586638 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
APOC1-201ENST00000586638 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
APOC1-201ENST00000586638 UTYO14607 1347 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 SCN7AQ01118 1682 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 DPEP1P16444 411 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 ADRA2BP18089 450 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 GCKRQ14397 625 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 C8orf34Q49A92 452 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
APOC1-201ENST00000586638 SMARCA5O60264 1052 aaPredicted RBP12.64□□□□□ -0.39
APOC1-201ENST00000586638 GYS1P13807 737 aa12.64□□□□□ -0.39
APOC1-201ENST00000586638 POLA2Q14181 598 aa12.64□□□□□ -0.39
APOC1-201ENST00000586638 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
APOC1-201ENST00000586638 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
APOC1-201ENST00000586638 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
APOC1-201ENST00000586638 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
APOC1-201ENST00000586638 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
APOC1-201ENST00000586638 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
APOC1-201ENST00000586638 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
APOC1-201ENST00000586638 DNAJC5GQ8N7S2 189 aa12.63□□□□□ -0.39
APOC1-201ENST00000586638 SSH3Q8TE77 659 aa12.63□□□□□ -0.39
APOC1-201ENST00000586638 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 SRGAP3O43295 1099 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 SLC34A2O95436 690 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 KAZALD1Q96I82 304 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 BICC1Q9H694 974 aaKnown RBP12.62□□□□□ -0.39
APOC1-201ENST00000586638 NMRK2Q9NPI5 230 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 PIM2Q9P1W9 311 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
APOC1-201ENST00000586638 MYH3P11055 1940 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
APOC1-201ENST00000586638 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
APOC1-201ENST00000586638 A0A087WZG4 1122 aa12.61□□□□□ -0.39
APOC1-201ENST00000586638 KCNA3P22001 575 aa12.61□□□□□ -0.39
APOC1-201ENST00000586638 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
APOC1-201ENST00000586638 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
APOC1-201ENST00000586638 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
APOC1-201ENST00000586638 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
APOC1-201ENST00000586638 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
APOC1-201ENST00000586638 C4AP0C0L4 1744 aa12.61□□□□□ -0.39
APOC1-201ENST00000586638 COL15A1P39059 1388 aa12.6□□□□□ -0.39
APOC1-201ENST00000586638 IL6STP40189 918 aaPredicted RBP12.6□□□□□ -0.39
APOC1-201ENST00000586638 CASP7P55210 303 aa12.6□□□□□ -0.39
APOC1-201ENST00000586638 MTX1Q13505 466 aa12.6□□□□□ -0.39
APOC1-201ENST00000586638 ISCA1Q9BUE6 129 aa12.6□□□□□ -0.39
APOC1-201ENST00000586638 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
APOC1-201ENST00000586638 LAMB2P55268 1798 aa12.6□□□□□ -0.39
APOC1-201ENST00000586638 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
APOC1-201ENST00000586638 HLFQ16534 295 aa12.59□□□□□ -0.39
APOC1-201ENST00000586638 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
APOC1-201ENST00000586638 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
APOC1-201ENST00000586638 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
APOC1-201ENST00000586638 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms