RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 CC2D2BQ6DHV5 1058 aa15.97■□□□□ 0.15
ERCC2-207ENST00000586441 WDR63Q8IWG1 891 aa15.97■□□□□ 0.15
ERCC2-207ENST00000586441 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
ERCC2-207ENST00000586441 ANXA1P04083 346 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 GPTP24298 496 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 AIMP1Q12904 312 aaKnown RBP15.96■□□□□ 0.15
ERCC2-207ENST00000586441 ERFEQ4G0M1 354 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 NECTIN2Q92692 538 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 CRAMP1Q96RY5 1269 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 CCDC88AQ3V6T2 1871 aa15.96■□□□□ 0.15
ERCC2-207ENST00000586441 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.14
ERCC2-207ENST00000586441 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 KIF3CO14782 793 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 CCDC93Q567U6 631 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 NLRP10Q86W26 655 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 ANKRD36CQ5JPF3 1778 aa15.95■□□□□ 0.14
ERCC2-207ENST00000586441 RASSF7Q02833 373 aa15.94■□□□□ 0.14
ERCC2-207ENST00000586441 C8orf58Q8NAV2 365 aa15.94■□□□□ 0.14
ERCC2-207ENST00000586441 ZNF526Q8TF50 670 aaPredicted RBP15.94■□□□□ 0.14
ERCC2-207ENST00000586441 ABCC12Q96J65 1359 aa15.93■□□□□ 0.14
ERCC2-207ENST00000586441 GLTPD2A6NH11 291 aa15.93■□□□□ 0.14
ERCC2-207ENST00000586441 TOMM70O94826 608 aa15.93■□□□□ 0.14
ERCC2-207ENST00000586441 DPY19L2Q6NUT2 758 aa15.93■□□□□ 0.14
ERCC2-207ENST00000586441 RPGRQ92834 1020 aaKnown RBP15.93■□□□□ 0.14
ERCC2-207ENST00000586441 RBM17Q96I25 401 aaKnown RBP15.93■□□□□ 0.14
ERCC2-207ENST00000586441 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
ERCC2-207ENST00000586441 SH3TC1Q8TE82 1336 aa15.93■□□□□ 0.14
ERCC2-207ENST00000586441 PRELPP51888 382 aa15.92■□□□□ 0.14
ERCC2-207ENST00000586441 ZBED9Q6R2W3 1325 aa15.92■□□□□ 0.14
ERCC2-207ENST00000586441 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
ERCC2-207ENST00000586441 CACNA1SQ13698 1873 aa15.91■□□□□ 0.14
ERCC2-207ENST00000586441 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
ERCC2-207ENST00000586441 FKBP4Q02790 459 aaKnown RBP eCLIP15.91■□□□□ 0.14
ERCC2-207ENST00000586441 GOLGA2Q08379 1002 aa15.91■□□□□ 0.14
ERCC2-207ENST00000586441 PSMD1Q99460 953 aa15.91■□□□□ 0.14
ERCC2-207ENST00000586441 TRMT112Q9UI30 125 aaKnown RBP15.91■□□□□ 0.14
ERCC2-207ENST00000586441 ELL2O00472 640 aaPredicted RBP15.9■□□□□ 0.14
ERCC2-207ENST00000586441 BBOX1O75936 387 aa15.9■□□□□ 0.14
ERCC2-207ENST00000586441 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
ERCC2-207ENST00000586441 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
ERCC2-207ENST00000586441 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
ERCC2-207ENST00000586441 VEGFAP15692 232 aaPredicted RBP15.89■□□□□ 0.13
ERCC2-207ENST00000586441 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.13
ERCC2-207ENST00000586441 TSPYL6Q8N831 410 aa15.89■□□□□ 0.13
ERCC2-207ENST00000586441 NMRK2Q9NPI5 230 aa15.89■□□□□ 0.13
ERCC2-207ENST00000586441 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
ERCC2-207ENST00000586441 SNED1Q8TER0 1413 aa15.88■□□□□ 0.13
ERCC2-207ENST00000586441 TWISTNBQ3B726 338 aaPredicted RBP15.88■□□□□ 0.13
ERCC2-207ENST00000586441 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
ERCC2-207ENST00000586441 CCDC191Q8NCU4 936 aa15.88■□□□□ 0.13
ERCC2-207ENST00000586441 RBM46Q8TBY0 533 aaKnown RBP15.88■□□□□ 0.13
ERCC2-207ENST00000586441 STK31Q9BXU1 1019 aa15.88■□□□□ 0.13
ERCC2-207ENST00000586441 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
ERCC2-207ENST00000586441 NEFLP07196 543 aa15.87■□□□□ 0.13
ERCC2-207ENST00000586441 SF3B3Q15393 1217 aaKnown RBP15.87■□□□□ 0.13
ERCC2-207ENST00000586441 C16orf71Q8IYS4 520 aaPredicted RBP15.87■□□□□ 0.13
ERCC2-207ENST00000586441 TSR2Q969E8 191 aaKnown RBP15.87■□□□□ 0.13
ERCC2-207ENST00000586441 TMX4Q9H1E5 349 aaPredicted RBP15.87■□□□□ 0.13
ERCC2-207ENST00000586441 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
ERCC2-207ENST00000586441 FSTL1Q12841 308 aa15.86■□□□□ 0.13
ERCC2-207ENST00000586441 KSR2Q6VAB6 950 aa15.86■□□□□ 0.13
ERCC2-207ENST00000586441 ZBTB38Q8NAP3 1195 aaPredicted RBP15.86■□□□□ 0.13
ERCC2-207ENST00000586441 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
ERCC2-207ENST00000586441 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
ERCC2-207ENST00000586441 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
ERCC2-207ENST00000586441 ATP6V0A2Q9Y487 856 aa15.86■□□□□ 0.13
ERCC2-207ENST00000586441 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
ERCC2-207ENST00000586441 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
ERCC2-207ENST00000586441 HSPA6P17066 643 aa15.85■□□□□ 0.13
ERCC2-207ENST00000586441 C3orf67Q6ZVT6 689 aa15.85■□□□□ 0.13
ERCC2-207ENST00000586441 DDX46Q7L014 1031 aaKnown RBP15.85■□□□□ 0.13
ERCC2-207ENST00000586441 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
ERCC2-207ENST00000586441 SYNE4Q8N205 404 aa15.85■□□□□ 0.13
ERCC2-207ENST00000586441 FANCIQ9NVI1 1328 aa15.85■□□□□ 0.13
ERCC2-207ENST00000586441 SENP3-EIF4A1A0A087X0R7 540 aa15.84■□□□□ 0.13
ERCC2-207ENST00000586441 VAMP4O75379 141 aa15.84■□□□□ 0.13
ERCC2-207ENST00000586441 HCLS1P14317 486 aaPredicted RBP15.84■□□□□ 0.13
ERCC2-207ENST00000586441 IARSP41252 1262 aaKnown RBP15.84■□□□□ 0.13
ERCC2-207ENST00000586441 WDR90Q96KV7 1748 aa15.84■□□□□ 0.13
ERCC2-207ENST00000586441 LAMB2P55268 1798 aa15.83■□□□□ 0.12
ERCC2-207ENST00000586441 FZD9O00144 591 aa15.83■□□□□ 0.12
ERCC2-207ENST00000586441 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
ERCC2-207ENST00000586441 PCCAP05165 728 aaPredicted RBP15.83■□□□□ 0.12
ERCC2-207ENST00000586441 GRAPQ13588 217 aa15.83■□□□□ 0.12
ERCC2-207ENST00000586441 SUPT20HQ8NEM7 779 aa15.83■□□□□ 0.12
ERCC2-207ENST00000586441 GRAPLQ8TC17 118 aaPredicted RBP15.83■□□□□ 0.12
ERCC2-207ENST00000586441 FAM89AQ96GI7 184 aa15.83■□□□□ 0.12
ERCC2-207ENST00000586441 L3MBTL3Q96JM7 780 aaPredicted RBP15.83■□□□□ 0.12
ERCC2-207ENST00000586441 RTFDC1Q9BY42 306 aaPredicted RBP15.83■□□□□ 0.12
ERCC2-207ENST00000586441 ABCC4O15439 1325 aa15.83■□□□□ 0.12
ERCC2-207ENST00000586441 PI4KAP2A4QPH2 592 aa15.82■□□□□ 0.12
ERCC2-207ENST00000586441 IRS4O14654 1257 aaPredicted RBP15.82■□□□□ 0.12
ERCC2-207ENST00000586441 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
ERCC2-207ENST00000586441 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms