RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 CFAP45Q9UL16 551 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 PES1O00541 588 aaKnown RBP12.43□□□□□ -0.42
RNF43-207ENST00000583753 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 NCOA5Q9HCD5 579 aaKnown RBP12.43□□□□□ -0.42
RNF43-207ENST00000583753 DDX19AQ9NUU7 478 aaKnown RBP12.43□□□□□ -0.42
RNF43-207ENST00000583753 AMOTL2Q9Y2J4 779 aa12.43□□□□□ -0.42
RNF43-207ENST00000583753 KIAA1524Q8TCG1 905 aa12.42□□□□□ -0.42
RNF43-207ENST00000583753 LSG1Q9H089 658 aaKnown RBP12.42□□□□□ -0.42
RNF43-207ENST00000583753 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
RNF43-207ENST00000583753 CCDC69A6NI79 296 aa12.42□□□□□ -0.42
RNF43-207ENST00000583753 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
RNF43-207ENST00000583753 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
RNF43-207ENST00000583753 GTF3C6Q969F1 213 aa12.42□□□□□ -0.42
RNF43-207ENST00000583753 OSBPL3Q9H4L5 887 aa12.42□□□□□ -0.42
RNF43-207ENST00000583753 CCDC171Q6TFL3 1326 aa12.42□□□□□ -0.42
RNF43-207ENST00000583753 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 NAT10Q9H0A0 1025 aaKnown RBP12.41□□□□□ -0.42
RNF43-207ENST00000583753 RNF17Q9BXT8 1623 aaKnown RBP12.41□□□□□ -0.42
RNF43-207ENST00000583753 HSP90AB3PQ58FF7 597 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 HIP1O00291 1037 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 GTF2F1P35269 517 aaKnown RBP eCLIP12.41□□□□□ -0.425e-8■■■■□ 25.1
RNF43-207ENST00000583753 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
RNF43-207ENST00000583753 APOBRQ0VD83 1088 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 ELF2Q15723 593 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 CCDC82Q8N4S0 544 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 LEO1Q8WVC0 666 aaPredicted RBP12.41□□□□□ -0.42
RNF43-207ENST00000583753 CHMP4CQ96CF2 233 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 RGS12O14924 1447 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 QRICH2Q9H0J4 1663 aa12.41□□□□□ -0.42
RNF43-207ENST00000583753 GOLIM4O00461 696 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 SLC27A2O14975 620 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 ZNF75DP51815 510 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 SEC62Q99442 399 aaKnown RBP12.4□□□□□ -0.42
RNF43-207ENST00000583753 MYOM1P52179 1685 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 A0A0D9SFI3 127 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 A0A1B0GVL5 298 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 SFPQP23246 707 aaKnown RBP eCLIP12.4□□□□□ -0.424e-8■■■■□ 21.6
RNF43-207ENST00000583753 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
RNF43-207ENST00000583753 CFAP100Q494V2 611 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 TLR7Q9NYK1 1049 aaKnown RBP12.4□□□□□ -0.42
RNF43-207ENST00000583753 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 TET3O43151 1660 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
RNF43-207ENST00000583753 ZSCAN25Q6NSZ9 544 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
RNF43-207ENST00000583753 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
RNF43-207ENST00000583753 BBXQ8WY36 941 aaPredicted RBP12.4□□□□□ -0.42
RNF43-207ENST00000583753 AP5Z1O43299 807 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 RALYLQ86SE5 291 aaKnown RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 ZNF396Q96N95 335 aaPredicted RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 KCNF1Q9H3M0 494 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 SYT10Q6XYQ8 523 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 ZNF215Q9UL58 517 aaPredicted RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 EDC4Q6P2E9 1401 aaKnown RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 PRAMEF22A3QJZ6 481 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 MARCKSP29966 332 aaPredicted RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 SNW1Q13573 536 aaKnown RBP12.39□□□□□ -0.43
RNF43-207ENST00000583753 UBXN4Q92575 508 aa12.39□□□□□ -0.43
RNF43-207ENST00000583753 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
RNF43-207ENST00000583753 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
RNF43-207ENST00000583753 ANO10Q9NW15 660 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 METP08581 1390 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 PNPLA6Q8IY17 1366 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 CHGBP05060 677 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 DMTNQ08495 405 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 STX1AQ16623 288 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 SLFNL1Q499Z3 407 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 TEX35Q5T0J7 233 aa12.38□□□□□ -0.43
RNF43-207ENST00000583753 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
RNF43-207ENST00000583753 PROSER3Q2NL68 480 aa12.37□□□□□ -0.43
RNF43-207ENST00000583753 PI4K2BQ8TCG2 481 aa12.37□□□□□ -0.43
RNF43-207ENST00000583753 RAPGEF4Q8WZA2 1011 aa12.37□□□□□ -0.43
RNF43-207ENST00000583753 IFNKQ9P0W0 207 aa12.37□□□□□ -0.43
RNF43-207ENST00000583753 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
RNF43-207ENST00000583753 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
RNF43-207ENST00000583753 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
RNF43-207ENST00000583753 RRP12Q5JTH9 1297 aaKnown RBP12.36□□□□□ -0.43
RNF43-207ENST00000583753 ARGLU1Q9NWB6 273 aaPredicted RBP12.36□□□□□ -0.43
RNF43-207ENST00000583753 GLI2P10070 1586 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 MED14O60244 1454 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 YEATS2Q9ULM3 1422 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 RXRAP19793 462 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 KRT222Q8N1A0 295 aa12.36□□□□□ -0.43
RNF43-207ENST00000583753 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms