RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 MAP3K2Q9Y2U5 619 aa23.28■■□□□ 1.32
LIMD2-211ENST00000583211 H0YIN7 160 aa23.27■■□□□ 1.32
LIMD2-211ENST00000583211 FKBP5Q13451 457 aaPredicted RBP23.27■■□□□ 1.32
LIMD2-211ENST00000583211 GPR162Q16538 588 aa23.27■■□□□ 1.32
LIMD2-211ENST00000583211 ALDH1L2Q3SY69 923 aa23.27■■□□□ 1.32
LIMD2-211ENST00000583211 CCDC24Q8N4L8 307 aa23.27■■□□□ 1.32
LIMD2-211ENST00000583211 DDX60Q8IY21 1712 aaKnown RBP23.27■■□□□ 1.32
LIMD2-211ENST00000583211 CHRNA5P30532 468 aa23.26■■□□□ 1.31
LIMD2-211ENST00000583211 NUTM1Q86Y26 1132 aa23.26■■□□□ 1.31
LIMD2-211ENST00000583211 C2CD5Q86YS7 1000 aa23.26■■□□□ 1.31
LIMD2-211ENST00000583211 PIM2Q9P1W9 311 aa23.26■■□□□ 1.31
LIMD2-211ENST00000583211 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
LIMD2-211ENST00000583211 ERFEQ4G0M1 354 aa23.25■■□□□ 1.31
LIMD2-211ENST00000583211 MYD88Q99836 296 aa23.25■■□□□ 1.31
LIMD2-211ENST00000583211 ABCC12Q96J65 1359 aa23.25■■□□□ 1.31
LIMD2-211ENST00000583211 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
LIMD2-211ENST00000583211 NEXNQ0ZGT2 675 aa23.24■■□□□ 1.31
LIMD2-211ENST00000583211 PELP1Q8IZL8 1130 aaKnown RBP23.24■■□□□ 1.31
LIMD2-211ENST00000583211 SSH1Q8WYL5 1049 aa23.24■■□□□ 1.31
LIMD2-211ENST00000583211 TRMT112Q9UI30 125 aaKnown RBP23.24■■□□□ 1.31
LIMD2-211ENST00000583211 YBX3P16989 372 aaKnown RBP eCLIP23.23■■□□□ 1.31
LIMD2-211ENST00000583211 SLC10A5Q5PT55 438 aa23.23■■□□□ 1.31
LIMD2-211ENST00000583211 MRPL50Q8N5N7 158 aaKnown RBP23.23■■□□□ 1.31
LIMD2-211ENST00000583211 CCDC191Q8NCU4 936 aa23.23■■□□□ 1.31
LIMD2-211ENST00000583211 SH3TC1Q8TE82 1336 aa23.23■■□□□ 1.31
LIMD2-211ENST00000583211 MYH3P11055 1940 aa23.22■■□□□ 1.31
LIMD2-211ENST00000583211 GRIN3BO60391 1043 aa23.22■■□□□ 1.31
LIMD2-211ENST00000583211 SRGNP10124 158 aa23.22■■□□□ 1.31
LIMD2-211ENST00000583211 DNAAF4Q8WXU2 420 aa23.22■■□□□ 1.31
LIMD2-211ENST00000583211 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
LIMD2-211ENST00000583211 STYK1Q6J9G0 422 aa23.21■■□□□ 1.31
LIMD2-211ENST00000583211 MASTLQ96GX5 879 aa23.21■■□□□ 1.31
LIMD2-211ENST00000583211 CWC25Q9NXE8 425 aaPredicted RBP23.21■■□□□ 1.31
LIMD2-211ENST00000583211 GOLGB1Q14789 3259 aaKnown RBP23.2■■□□□ 1.3
LIMD2-211ENST00000583211 SLX4Q8IY92 1834 aa23.2■■□□□ 1.3
LIMD2-211ENST00000583211 PTPRCP08575 1304 aa23.2■■□□□ 1.3
LIMD2-211ENST00000583211 CRY2Q49AN0 593 aa23.2■■□□□ 1.3
LIMD2-211ENST00000583211 BCS1LQ9Y276 419 aa23.2■■□□□ 1.3
LIMD2-211ENST00000583211 NPR1P16066 1061 aa23.19■■□□□ 1.3
LIMD2-211ENST00000583211 TTLL6Q8N841 843 aa23.19■■□□□ 1.3
LIMD2-211ENST00000583211 ZBTB38Q8NAP3 1195 aaPredicted RBP23.19■■□□□ 1.3
LIMD2-211ENST00000583211 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
LIMD2-211ENST00000583211 SMC4Q9NTJ3 1288 aa23.19■■□□□ 1.3
LIMD2-211ENST00000583211 WWC3Q9ULE0 1092 aa23.19■■□□□ 1.3
LIMD2-211ENST00000583211 IGKV5-2P06315 115 aa23.18■■□□□ 1.3
LIMD2-211ENST00000583211 BRPF1P55201 1214 aaPredicted RBP23.18■■□□□ 1.3
LIMD2-211ENST00000583211 ZNF622Q969S3 477 aaKnown RBP eCLIP23.18■■□□□ 1.3
LIMD2-211ENST00000583211 NLRP3Q96P20 1036 aa23.18■■□□□ 1.3
LIMD2-211ENST00000583211 NEURL1BA8MQ27 555 aa23.17■■□□□ 1.3
LIMD2-211ENST00000583211 LINS1Q8NG48 757 aa23.17■■□□□ 1.3
LIMD2-211ENST00000583211 BCL2L13Q9BXK5 485 aa23.17■■□□□ 1.3
LIMD2-211ENST00000583211 UTRNP46939 3433 aa23.16■■□□□ 1.3
LIMD2-211ENST00000583211 PCCAP05165 728 aaPredicted RBP23.16■■□□□ 1.3
LIMD2-211ENST00000583211 HSP90B1P14625 803 aaKnown RBP23.16■■□□□ 1.3
LIMD2-211ENST00000583211 RARSP54136 660 aaKnown RBP23.16■■□□□ 1.3
LIMD2-211ENST00000583211 CWF19L2Q2TBE0 894 aaKnown RBP23.16■■□□□ 1.3
LIMD2-211ENST00000583211 FAM89AQ96GI7 184 aa23.16■■□□□ 1.3
LIMD2-211ENST00000583211 F6X3S4 739 aa23.15■■□□□ 1.3
LIMD2-211ENST00000583211 ALDH1B1P30837 517 aa23.15■■□□□ 1.3
LIMD2-211ENST00000583211 HOXA10P31260 410 aaPredicted RBP23.15■■□□□ 1.3
LIMD2-211ENST00000583211 SYNE4Q8N205 404 aa23.15■■□□□ 1.3
LIMD2-211ENST00000583211 RPGRQ92834 1020 aaKnown RBP23.15■■□□□ 1.3
LIMD2-211ENST00000583211 FER1L6Q2WGJ9 1857 aa23.15■■□□□ 1.3
LIMD2-211ENST00000583211 HCLS1P14317 486 aaPredicted RBP23.14■■□□□ 1.29
LIMD2-211ENST00000583211 SBF1O95248 1867 aa23.13■■□□□ 1.29
LIMD2-211ENST00000583211 CDHR2Q9BYE9 1310 aa23.13■■□□□ 1.29
LIMD2-211ENST00000583211 GCKRQ14397 625 aa23.13■■□□□ 1.29
LIMD2-211ENST00000583211 BEND3Q5T5X7 828 aa23.13■■□□□ 1.29
LIMD2-211ENST00000583211 KIF16BQ96L93 1317 aa23.12■■□□□ 1.29
LIMD2-211ENST00000583211 IRS4O14654 1257 aaPredicted RBP23.12■■□□□ 1.29
LIMD2-211ENST00000583211 TAF1P21675 1872 aa23.12■■□□□ 1.29
LIMD2-211ENST00000583211 PRPF40BQ6NWY9 871 aaKnown RBP23.12■■□□□ 1.29
LIMD2-211ENST00000583211 C3orf67Q6ZVT6 689 aa23.12■■□□□ 1.29
LIMD2-211ENST00000583211 RBM17Q96I25 401 aaKnown RBP23.12■■□□□ 1.29
LIMD2-211ENST00000583211 CCDC88AQ3V6T2 1871 aa23.11■■□□□ 1.29
LIMD2-211ENST00000583211 RTL5Q5HYW3 569 aaPredicted RBP23.11■■□□□ 1.29
LIMD2-211ENST00000583211 CRAMP1Q96RY5 1269 aa23.11■■□□□ 1.29
LIMD2-211ENST00000583211 ALDH1L1O75891 902 aa23.1■■□□□ 1.29
LIMD2-211ENST00000583211 SF3B3Q15393 1217 aaKnown RBP23.1■■□□□ 1.29
LIMD2-211ENST00000583211 SLC4A10Q6U841 1118 aa23.1■■□□□ 1.29
LIMD2-211ENST00000583211 H7C1W4 665 aa23.09■■□□□ 1.29
LIMD2-211ENST00000583211 SOGA3Q5TF21 947 aa23.09■■□□□ 1.29
LIMD2-211ENST00000583211 ARHGAP45Q92619 1136 aa23.09■■□□□ 1.29
LIMD2-211ENST00000583211 SRCIN1Q9C0H9 1055 aa23.09■■□□□ 1.29
LIMD2-211ENST00000583211 NOB1Q9ULX3 412 aaKnown RBP23.09■■□□□ 1.29
LIMD2-211ENST00000583211 PDE8AO60658 829 aa23.08■■□□□ 1.29
LIMD2-211ENST00000583211 API5Q9BZZ5 524 aaKnown RBP23.08■■□□□ 1.29
LIMD2-211ENST00000583211 ARHGAP27Q6ZUM4 889 aa23.07■■□□□ 1.28
LIMD2-211ENST00000583211 UBE3BQ7Z3V4 1068 aa23.07■■□□□ 1.28
LIMD2-211ENST00000583211 DICER1Q9UPY3 1922 aaKnown RBP23.06■■□□□ 1.28
LIMD2-211ENST00000583211 DDX46Q7L014 1031 aaKnown RBP23.06■■□□□ 1.28
LIMD2-211ENST00000583211 C7orf43Q8WVR3 580 aa23.06■■□□□ 1.28
LIMD2-211ENST00000583211 ABCC4O15439 1325 aa23.06■■□□□ 1.28
LIMD2-211ENST00000583211 IPO8O15397 1037 aaKnown RBP23.05■■□□□ 1.28
LIMD2-211ENST00000583211 C21orf2O43822 256 aa23.05■■□□□ 1.28
LIMD2-211ENST00000583211 CASP7P55210 303 aa23.05■■□□□ 1.28
LIMD2-211ENST00000583211 JARID2Q92833 1246 aaPredicted RBP23.05■■□□□ 1.28
LIMD2-211ENST00000583211 PLA2G12BQ9BX93 195 aa23.05■■□□□ 1.28
LIMD2-211ENST00000583211 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
LIMD2-211ENST00000583211 GRM8O00222 908 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms