RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 RGS19P49795 217 aa11.13□□□□□ -0.63
SUPT4H1-206ENST00000581204 ABHD8Q96I13 439 aa11.13□□□□□ -0.63
SUPT4H1-206ENST00000581204 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
SUPT4H1-206ENST00000581204 MEGF6O75095 1541 aa11.13□□□□□ -0.63
SUPT4H1-206ENST00000581204 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 DIAPH1O60610 1272 aaKnown RBP11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 TGFB2P61812 414 aa11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 RRS1Q15050 365 aaKnown RBP11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 SH3D19Q5HYK7 790 aa11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 REPIN1Q9BWE0 567 aaKnown RBP11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 EMILIN1Q9Y6C2 1016 aa11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 SBF1O95248 1867 aa11.12□□□□□ -0.63
SUPT4H1-206ENST00000581204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 KCNA3P22001 575 aa11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 FLIIQ13045 1269 aa11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 INSRP06213 1382 aa11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 PALLDQ8WX93 1383 aa11.11□□□□□ -0.63
SUPT4H1-206ENST00000581204 U2AF1L5P0DN76 240 aaPredicted RBP11.1□□□□□ -0.63
SUPT4H1-206ENST00000581204 U2AF1Q01081 240 aaKnown RBP eCLIP11.1□□□□□ -0.63
SUPT4H1-206ENST00000581204 DIXDC1Q155Q3 683 aa11.1□□□□□ -0.63
SUPT4H1-206ENST00000581204 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 MMP10P09238 476 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 DPEP1P16444 411 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 AMPHP49418 695 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 CCDC146Q8IYE0 955 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 RNF181Q9P0P0 153 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 C4AP0C0L4 1744 aa11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
SUPT4H1-206ENST00000581204 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 COL3A1P02461 1466 aaPredicted RBP11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 CNTNAP1P78357 1384 aa11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 VIRMAQ69YN4 1812 aaKnown RBP11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 NBPF26B4DH59 902 aa11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 SSFA2P28290 1259 aa11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 BEGAINQ9BUH8 593 aa11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
SUPT4H1-206ENST00000581204 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
SUPT4H1-206ENST00000581204 MAP3K19Q56UN5 1328 aa11.07□□□□□ -0.64
SUPT4H1-206ENST00000581204 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
SUPT4H1-206ENST00000581204 LBX1P52954 281 aa11.06□□□□□ -0.64
SUPT4H1-206ENST00000581204 SKIV2LQ15477 1246 aaKnown RBP11.06□□□□□ -0.64
SUPT4H1-206ENST00000581204 PACS2Q86VP3 889 aa11.06□□□□□ -0.64
SUPT4H1-206ENST00000581204 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
SUPT4H1-206ENST00000581204 ZCRB1Q8TBF4 217 aaKnown RBP11.06□□□□□ -0.64
SUPT4H1-206ENST00000581204 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
SUPT4H1-206ENST00000581204 FLT4P35916 1363 aa11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 POTECB2RU33 542 aa11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 NEFMP07197 916 aa11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 HSPA8P11142 646 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 IL13P35225 146 aa11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 SULF1Q8IWU6 871 aa11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 ITGB4P16144 1822 aa11.05□□□□□ -0.64
SUPT4H1-206ENST00000581204 KIF24Q5T7B8 1368 aa11.04□□□□□ -0.64
SUPT4H1-206ENST00000581204 APAF1O14727 1248 aa11.04□□□□□ -0.64
SUPT4H1-206ENST00000581204 COL9A1P20849 921 aa11.04□□□□□ -0.64
SUPT4H1-206ENST00000581204 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
SUPT4H1-206ENST00000581204 WBP1LQ9NX94 342 aa11.04□□□□□ -0.64
SUPT4H1-206ENST00000581204 GLTPD2A6NH11 291 aa11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 VEGFAP15692 232 aaPredicted RBP11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 DNAJB2P25686 324 aa11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 HOXC9P31274 260 aa11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 EIF4A2Q14240 407 aaKnown RBP11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 ZMYND15Q9H091 742 aa11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
SUPT4H1-206ENST00000581204 RCCD1A6NED2 376 aa11.02□□□□□ -0.65
SUPT4H1-206ENST00000581204 HMOX1P09601 288 aa11.02□□□□□ -0.65
SUPT4H1-206ENST00000581204 HMGB2P26583 209 aaKnown RBP11.02□□□□□ -0.65
SUPT4H1-206ENST00000581204 RASSF7Q02833 373 aa11.02□□□□□ -0.65
SUPT4H1-206ENST00000581204 NGEFQ8N5V2 710 aa11.02□□□□□ -0.65
SUPT4H1-206ENST00000581204 IP6K1Q92551 441 aa11.02□□□□□ -0.65
SUPT4H1-206ENST00000581204 EYA1Q99502 592 aa11.02□□□□□ -0.65
SUPT4H1-206ENST00000581204 CCDC85CA6NKD9 419 aa11.01□□□□□ -0.65
SUPT4H1-206ENST00000581204 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
SUPT4H1-206ENST00000581204 VEGFBP49765 207 aa11.01□□□□□ -0.65
SUPT4H1-206ENST00000581204 ITPK1Q13572 414 aa11.01□□□□□ -0.65
SUPT4H1-206ENST00000581204 AIDAQ96BJ3 306 aa11.01□□□□□ -0.65
SUPT4H1-206ENST00000581204 LTV1Q96GA3 475 aaPredicted RBP11.01□□□□□ -0.65
SUPT4H1-206ENST00000581204 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
SUPT4H1-206ENST00000581204 THSD7BQ9C0I4 1608 aa11□□□□□ -0.65
SUPT4H1-206ENST00000581204 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
SUPT4H1-206ENST00000581204 CCDC87Q9NVE4 849 aa11□□□□□ -0.65
SUPT4H1-206ENST00000581204 PIM2Q9P1W9 311 aa11□□□□□ -0.65
SUPT4H1-206ENST00000581204 RRP7AQ9Y3A4 280 aaKnown RBP11□□□□□ -0.65
SUPT4H1-206ENST00000581204 PASKQ96RG2 1323 aa11□□□□□ -0.65
SUPT4H1-206ENST00000581204 DALRD3Q5D0E6 543 aaKnown RBP10.99□□□□□ -0.65
SUPT4H1-206ENST00000581204 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
SUPT4H1-206ENST00000581204 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
SUPT4H1-206ENST00000581204 NLRP7Q8WX94 980 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms