RNA–Protein interactions for RNA: ENST00000580539.2

RN7SL716P-201, Transcript of RNA, 7SL, cytoplasmic 716, pseudogene, humanhuman

BASIC

Gene RN7SL716P, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL716P-201ENST00000580539 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
RN7SL716P-201ENST00000580539 AFDNP55196 1824 aaKnown RBP12.96□□□□□ -0.33
RN7SL716P-201ENST00000580539 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
RN7SL716P-201ENST00000580539 VEGFBP49765 207 aa12.95□□□□□ -0.34
RN7SL716P-201ENST00000580539 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
RN7SL716P-201ENST00000580539 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
RN7SL716P-201ENST00000580539 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
RN7SL716P-201ENST00000580539 TNRC6CQ9HCJ0 1690 aaKnown RBP12.94□□□□□ -0.34
RN7SL716P-201ENST00000580539 PLCG2P16885 1265 aa12.94□□□□□ -0.34
RN7SL716P-201ENST00000580539 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
RN7SL716P-201ENST00000580539 HLFQ16534 295 aa12.94□□□□□ -0.34
RN7SL716P-201ENST00000580539 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
RN7SL716P-201ENST00000580539 SLAIN1Q8ND83 568 aa12.94□□□□□ -0.34
RN7SL716P-201ENST00000580539 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
RN7SL716P-201ENST00000580539 ZNF541Q9H0D2 1346 aa12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 MRC1P22897 1456 aa12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 IQCA1LA6NCM1 817 aa12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 CCDC93Q567U6 631 aa12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
RN7SL716P-201ENST00000580539 LTBP3Q9NS15 1303 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 TMEM88BA6NKF7 163 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 SNRPA1P09661 255 aaKnown RBP12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 NPR1P16066 1061 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 LBX1P52954 281 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 LDHDQ86WU2 507 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 RTF1Q92541 710 aaKnown RBP12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 NRXN2Q9P2S2 1712 aa12.92□□□□□ -0.34
RN7SL716P-201ENST00000580539 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 PASKQ96RG2 1323 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 EPHX2P34913 555 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 FKBP4Q02790 459 aaKnown RBP eCLIP12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 GRM1Q13255 1194 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 CNTROBQ8N137 903 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 AIDAQ96BJ3 306 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 GJA3Q9Y6H8 435 aa12.91□□□□□ -0.34
RN7SL716P-201ENST00000580539 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
RN7SL716P-201ENST00000580539 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
RN7SL716P-201ENST00000580539 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.34
RN7SL716P-201ENST00000580539 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
RN7SL716P-201ENST00000580539 CNTNAP1P78357 1384 aa12.9□□□□□ -0.34
RN7SL716P-201ENST00000580539 IARSP41252 1262 aaKnown RBP12.89□□□□□ -0.35
RN7SL716P-201ENST00000580539 DEFB115Q30KQ5 88 aa12.89□□□□□ -0.35
RN7SL716P-201ENST00000580539 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
RN7SL716P-201ENST00000580539 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
RN7SL716P-201ENST00000580539 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
RN7SL716P-201ENST00000580539 KLRG2A4D1S0 409 aaPredicted RBP12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 CTCFP49711 727 aaPredicted RBP12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 ABT1Q9ULW3 272 aaKnown RBP12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 CEMIPQ8WUJ3 1361 aa12.88□□□□□ -0.35
RN7SL716P-201ENST00000580539 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
RN7SL716P-201ENST00000580539 FZD9O00144 591 aa12.87□□□□□ -0.35
RN7SL716P-201ENST00000580539 GPTP24298 496 aa12.87□□□□□ -0.35
RN7SL716P-201ENST00000580539 JDP2Q8WYK2 163 aa12.87□□□□□ -0.35
RN7SL716P-201ENST00000580539 WBP1LQ9NX94 342 aa12.87□□□□□ -0.35
RN7SL716P-201ENST00000580539 NUDCQ9Y266 331 aa12.87□□□□□ -0.35
RN7SL716P-201ENST00000580539 TIAM2Q8IVF5 1701 aa12.87□□□□□ -0.35
RN7SL716P-201ENST00000580539 MYL6BP14649 208 aa12.86□□□□□ -0.35
RN7SL716P-201ENST00000580539 EPS15P42566 896 aa12.86□□□□□ -0.35
RN7SL716P-201ENST00000580539 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
RN7SL716P-201ENST00000580539 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
RN7SL716P-201ENST00000580539 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
RN7SL716P-201ENST00000580539 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
RN7SL716P-201ENST00000580539 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
RN7SL716P-201ENST00000580539 ST18O60284 1047 aa12.85□□□□□ -0.35
RN7SL716P-201ENST00000580539 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
RN7SL716P-201ENST00000580539 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
RN7SL716P-201ENST00000580539 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 TRAF5O00463 557 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 SUSD4Q5VX71 490 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 GPC2Q8N158 579 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 LARGE2Q8N3Y3 721 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 DDX21Q9NR30 783 aaKnown RBP eCLIP12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 TSKSQ9UJT2 592 aa12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
RN7SL716P-201ENST00000580539 FER1L6Q2WGJ9 1857 aa12.83□□□□□ -0.36
RN7SL716P-201ENST00000580539 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms