RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 ZNF496Q96IT1 587 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-212ENST00000579415 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.66
PPP4R1-212ENST00000579415 HIRAP54198 1017 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-212ENST00000579415 CSRNP1Q96S65 589 aa10.9□□□□□ -0.66
PPP4R1-212ENST00000579415 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.67
PPP4R1-212ENST00000579415 GMPSP49915 693 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 ZNF157P51786 506 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 CXCL9Q07325 125 aa10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 CRY2Q49AN0 593 aa10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 USP48Q86UV5 1035 aa10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 TRPM7Q96QT4 1865 aa10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
PPP4R1-212ENST00000579415 IL13P35225 146 aa10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 ZNF790Q6PG37 636 aa10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 C2orf69Q8N8R5 385 aa10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 GBA2Q9HCG7 927 aaPredicted RBP10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 HDAC9Q9UKV0 1011 aa10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 ZNRF3Q9ULT6 936 aa10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 NIP7Q9Y221 180 aaKnown RBP eCLIP10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 NPC1L1Q9UHC9 1359 aa10.88□□□□□ -0.67
PPP4R1-212ENST00000579415 CDHR2Q9BYE9 1310 aa10.87□□□□□ -0.67
PPP4R1-212ENST00000579415 RGL2O15211 777 aa10.87□□□□□ -0.67
PPP4R1-212ENST00000579415 PPIP5K2O43314 1243 aa10.87□□□□□ -0.67
PPP4R1-212ENST00000579415 FBXO46Q6PJ61 603 aaPredicted RBP10.87□□□□□ -0.67
PPP4R1-212ENST00000579415 DLK2Q6UY11 383 aa10.87□□□□□ -0.67
PPP4R1-212ENST00000579415 TRPM4Q8TD43 1214 aa10.87□□□□□ -0.67
PPP4R1-212ENST00000579415 BCORQ6W2J9 1755 aa10.87□□□□□ -0.67
PPP4R1-212ENST00000579415 SCN11AQ9UI33 1791 aa10.86□□□□□ -0.67
PPP4R1-212ENST00000579415 SLC10A3P09131 477 aa10.86□□□□□ -0.67
PPP4R1-212ENST00000579415 GTF2E1P29083 439 aaPredicted RBP10.86□□□□□ -0.67
PPP4R1-212ENST00000579415 HOXA10P31260 410 aaPredicted RBP10.86□□□□□ -0.67
PPP4R1-212ENST00000579415 AOC3Q16853 763 aa10.86□□□□□ -0.67
PPP4R1-212ENST00000579415 MTHFSDQ2M296 383 aaKnown RBP10.86□□□□□ -0.67
PPP4R1-212ENST00000579415 ZNF296Q8WUU4 475 aaPredicted RBP10.86□□□□□ -0.67
PPP4R1-212ENST00000579415 MKI67P46013 3256 aaKnown RBP10.85□□□□□ -0.67
PPP4R1-212ENST00000579415 CACNA1SQ13698 1873 aa10.85□□□□□ -0.67
PPP4R1-212ENST00000579415 A0A0C4DFX4 3053 aa10.85□□□□□ -0.67
PPP4R1-212ENST00000579415 FAM177BA6PVY3 158 aa10.85□□□□□ -0.67
PPP4R1-212ENST00000579415 FMNL2Q96PY5 1086 aa10.85□□□□□ -0.67
PPP4R1-212ENST00000579415 BCL2L13Q9BXK5 485 aa10.85□□□□□ -0.67
PPP4R1-212ENST00000579415 CNOT7Q9UIV1 285 aaKnown RBP10.85□□□□□ -0.67
PPP4R1-212ENST00000579415 KIF7Q2M1P5 1343 aa10.84□□□□□ -0.67
PPP4R1-212ENST00000579415 H7C1D1 291 aa10.84□□□□□ -0.67
PPP4R1-212ENST00000579415 TNIP1Q15025 636 aa10.84□□□□□ -0.67
PPP4R1-212ENST00000579415 KRT26Q7Z3Y9 468 aa10.84□□□□□ -0.67
PPP4R1-212ENST00000579415 SLC17A8Q8NDX2 589 aa10.84□□□□□ -0.67
PPP4R1-212ENST00000579415 RPGRQ92834 1020 aaKnown RBP10.84□□□□□ -0.67
PPP4R1-212ENST00000579415 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
PPP4R1-212ENST00000579415 SZT2Q5T011 3432 aa10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 CUL9Q8IWT3 2517 aa10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 PIP4K2AP48426 406 aaPredicted RBP10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 TEFQ10587 303 aa10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 SLC51AQ86UW1 340 aa10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 CRAMP1Q96RY5 1269 aa10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
PPP4R1-212ENST00000579415 SHTN1A0MZ66 631 aa10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 PPEF1O14829 653 aaPredicted RBP10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 RAD17O75943 681 aa10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 SUPT20HQ8NEM7 779 aa10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 IL17REQ8NFR9 667 aa10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 RTFDC1Q9BY42 306 aaPredicted RBP10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 NYXQ9GZU5 481 aa10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 TMX4Q9H1E5 349 aaPredicted RBP10.82□□□□□ -0.68
PPP4R1-212ENST00000579415 ABCC12Q96J65 1359 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 UBR2Q8IWV8 1755 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 ADM5C9JUS6 153 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 GPR25O00155 361 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 TCERG1O14776 1098 aaKnown RBP10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 HMOX1P09601 288 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 HLFQ16534 295 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 INTS3Q68E01 1043 aaKnown RBP10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 NUTM1Q86Y26 1132 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 RASAL3Q86YV0 1011 aa10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 RBM17Q96I25 401 aaKnown RBP10.81□□□□□ -0.68
PPP4R1-212ENST00000579415 SAMD7Q7Z3H4 446 aa10.8□□□□□ -0.68
PPP4R1-212ENST00000579415 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
PPP4R1-212ENST00000579415 DPF2Q92785 391 aa10.8□□□□□ -0.68
PPP4R1-212ENST00000579415 DCPSQ96C86 337 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-212ENST00000579415 ATP6V0A2Q9Y487 856 aa10.8□□□□□ -0.68
PPP4R1-212ENST00000579415 RIC1Q4ADV7 1423 aa10.79□□□□□ -0.68
PPP4R1-212ENST00000579415 KCNQ3O43525 872 aa10.79□□□□□ -0.68
PPP4R1-212ENST00000579415 KIAA2012Q0VF49 1180 aa10.79□□□□□ -0.68
PPP4R1-212ENST00000579415 YDJCA8MPS7 323 aa10.78□□□□□ -0.68
PPP4R1-212ENST00000579415 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
PPP4R1-212ENST00000579415 FKTNO75072 461 aa10.78□□□□□ -0.68
PPP4R1-212ENST00000579415 EGFRP00533 1210 aa10.78□□□□□ -0.68
PPP4R1-212ENST00000579415 TBC1D10BQ4KMP7 808 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-212ENST00000579415 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-212ENST00000579415 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-212ENST00000579415 PRAMEF22A3QJZ6 481 aa10.77□□□□□ -0.69
PPP4R1-212ENST00000579415 BTBD11A6QL63 1104 aa10.77□□□□□ -0.69
PPP4R1-212ENST00000579415 GNAT3A8MTJ3 354 aa10.77□□□□□ -0.69
PPP4R1-212ENST00000579415 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms