RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 DPY19L2Q6NUT2 758 aa18.92■□□□□ 0.62
CCDC57-212ENST00000578910 ANKRD13DQ6ZTN6 518 aa18.92■□□□□ 0.62
CCDC57-212ENST00000578910 C3orf67Q6ZVT6 689 aa18.92■□□□□ 0.62
CCDC57-212ENST00000578910 C16orf71Q8IYS4 520 aaPredicted RBP18.92■□□□□ 0.62
CCDC57-212ENST00000578910 FER1L6Q2WGJ9 1857 aa18.92■□□□□ 0.62
CCDC57-212ENST00000578910 HOXA10P31260 410 aaPredicted RBP18.91■□□□□ 0.62
CCDC57-212ENST00000578910 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
CCDC57-212ENST00000578910 NLRP10Q86W26 655 aa18.91■□□□□ 0.62
CCDC57-212ENST00000578910 SYNE4Q8N205 404 aa18.91■□□□□ 0.62
CCDC57-212ENST00000578910 C8orf58Q8NAV2 365 aa18.91■□□□□ 0.62
CCDC57-212ENST00000578910 NLRP3Q96P20 1036 aa18.91■□□□□ 0.62
CCDC57-212ENST00000578910 MRS2Q9HD23 443 aa18.91■□□□□ 0.62
CCDC57-212ENST00000578910 IBTKQ9P2D0 1353 aaPredicted RBP18.91■□□□□ 0.62
CCDC57-212ENST00000578910 CACNA1SQ13698 1873 aa18.9■□□□□ 0.62
CCDC57-212ENST00000578910 VEGFAP15692 232 aaPredicted RBP18.9■□□□□ 0.62
CCDC57-212ENST00000578910 RTKN2Q8IZC4 609 aa18.9■□□□□ 0.62
CCDC57-212ENST00000578910 PLBD2Q8NHP8 589 aa18.9■□□□□ 0.62
CCDC57-212ENST00000578910 RBM46Q8TBY0 533 aaKnown RBP18.9■□□□□ 0.62
CCDC57-212ENST00000578910 RPGRQ92834 1020 aaKnown RBP18.9■□□□□ 0.62
CCDC57-212ENST00000578910 POTECB2RU33 542 aa18.89■□□□□ 0.61
CCDC57-212ENST00000578910 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC57-212ENST00000578910 ZNF428Q96B54 188 aa18.89■□□□□ 0.61
CCDC57-212ENST00000578910 RBM17Q96I25 401 aaKnown RBP18.89■□□□□ 0.61
CCDC57-212ENST00000578910 CRAMP1Q96RY5 1269 aa18.89■□□□□ 0.61
CCDC57-212ENST00000578910 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
CCDC57-212ENST00000578910 PHAXQ9H814 394 aaKnown RBP18.88■□□□□ 0.61
CCDC57-212ENST00000578910 ZNF277Q9NRM2 450 aaPredicted RBP18.88■□□□□ 0.61
CCDC57-212ENST00000578910 TRMT112Q9UI30 125 aaKnown RBP18.88■□□□□ 0.61
CCDC57-212ENST00000578910 TCERG1O14776 1098 aaKnown RBP18.87■□□□□ 0.61
CCDC57-212ENST00000578910 DDNO94850 711 aaPredicted RBP18.87■□□□□ 0.61
CCDC57-212ENST00000578910 HCLS1P14317 486 aaPredicted RBP18.87■□□□□ 0.61
CCDC57-212ENST00000578910 WWC1Q8IX03 1113 aa18.87■□□□□ 0.61
CCDC57-212ENST00000578910 ARFGEF2Q9Y6D5 1785 aa18.86■□□□□ 0.61
CCDC57-212ENST00000578910 TNRC6CQ9HCJ0 1690 aaKnown RBP18.86■□□□□ 0.61
CCDC57-212ENST00000578910 ATP5J2-PTCD1G3V325 749 aa18.86■□□□□ 0.61
CCDC57-212ENST00000578910 CCDC27Q2M243 656 aa18.86■□□□□ 0.61
CCDC57-212ENST00000578910 TSPYL6Q8N831 410 aa18.86■□□□□ 0.61
CCDC57-212ENST00000578910 ISCA1Q9BUE6 129 aa18.86■□□□□ 0.61
CCDC57-212ENST00000578910 RIC1Q4ADV7 1423 aa18.85■□□□□ 0.61
CCDC57-212ENST00000578910 DICER1Q9UPY3 1922 aaKnown RBP18.85■□□□□ 0.61
CCDC57-212ENST00000578910 CC2D2BQ6DHV5 1058 aa18.85■□□□□ 0.61
CCDC57-212ENST00000578910 SLC51AQ86UW1 340 aa18.85■□□□□ 0.61
CCDC57-212ENST00000578910 FSTL1Q12841 308 aa18.84■□□□□ 0.61
CCDC57-212ENST00000578910 TSR2Q969E8 191 aaKnown RBP18.84■□□□□ 0.61
CCDC57-212ENST00000578910 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
CCDC57-212ENST00000578910 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.61
CCDC57-212ENST00000578910 SH3TC1Q8TE82 1336 aa18.83■□□□□ 0.61
CCDC57-212ENST00000578910 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
CCDC57-212ENST00000578910 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.6
CCDC57-212ENST00000578910 RIC3Q7Z5B4 369 aa18.83■□□□□ 0.6
CCDC57-212ENST00000578910 FAM89AQ96GI7 184 aa18.83■□□□□ 0.6
CCDC57-212ENST00000578910 PSMD1Q99460 953 aa18.83■□□□□ 0.6
CCDC57-212ENST00000578910 APLP1P51693 650 aa18.82■□□□□ 0.6
CCDC57-212ENST00000578910 TIAM2Q8IVF5 1701 aa18.81■□□□□ 0.6
CCDC57-212ENST00000578910 BBOX1O75936 387 aa18.81■□□□□ 0.6
CCDC57-212ENST00000578910 TRIM28Q13263 835 aaKnown RBP18.81■□□□□ 0.6
CCDC57-212ENST00000578910 GRIPAP1Q4V328 841 aa18.81■□□□□ 0.6
CCDC57-212ENST00000578910 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
CCDC57-212ENST00000578910 CCDC30Q5VVM6 783 aa18.81■□□□□ 0.6
CCDC57-212ENST00000578910 SMC1BQ8NDV3 1235 aa18.81■□□□□ 0.6
CCDC57-212ENST00000578910 CEP350Q5VT06 3117 aa18.8■□□□□ 0.6
CCDC57-212ENST00000578910 ABCC4O15439 1325 aa18.8■□□□□ 0.6
CCDC57-212ENST00000578910 GOLGA2Q08379 1002 aa18.8■□□□□ 0.6
CCDC57-212ENST00000578910 RTL5Q5HYW3 569 aaPredicted RBP18.8■□□□□ 0.6
CCDC57-212ENST00000578910 CHMP4AQ9BY43 222 aa18.8■□□□□ 0.6
CCDC57-212ENST00000578910 ATP6V0A2Q9Y487 856 aa18.8■□□□□ 0.6
CCDC57-212ENST00000578910 SNED1Q8TER0 1413 aa18.8■□□□□ 0.6
CCDC57-212ENST00000578910 ANKRD36CQ5JPF3 1778 aa18.79■□□□□ 0.6
CCDC57-212ENST00000578910 FZD9O00144 591 aa18.79■□□□□ 0.6
CCDC57-212ENST00000578910 DDX46Q7L014 1031 aaKnown RBP18.79■□□□□ 0.6
CCDC57-212ENST00000578910 SP8Q8IXZ3 490 aa18.79■□□□□ 0.6
CCDC57-212ENST00000578910 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
CCDC57-212ENST00000578910 DNAJC5GQ8N7S2 189 aa18.79■□□□□ 0.6
CCDC57-212ENST00000578910 IL16Q14005 1332 aa18.78■□□□□ 0.6
CCDC57-212ENST00000578910 WDR90Q96KV7 1748 aa18.78■□□□□ 0.6
CCDC57-212ENST00000578910 HTRA3P83110 453 aa18.78■□□□□ 0.6
CCDC57-212ENST00000578910 JDP2Q8WYK2 163 aa18.78■□□□□ 0.6
CCDC57-212ENST00000578910 MYD88Q99836 296 aa18.78■□□□□ 0.6
CCDC57-212ENST00000578910 TMX4Q9H1E5 349 aaPredicted RBP18.78■□□□□ 0.6
CCDC57-212ENST00000578910 ZNF541Q9H0D2 1346 aa18.77■□□□□ 0.6
CCDC57-212ENST00000578910 SF3B3Q15393 1217 aaKnown RBP18.77■□□□□ 0.6
CCDC57-212ENST00000578910 TWISTNBQ3B726 338 aaPredicted RBP18.77■□□□□ 0.6
CCDC57-212ENST00000578910 IRS4O14654 1257 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-212ENST00000578910 POTEIP0CG38 1075 aa18.76■□□□□ 0.59
CCDC57-212ENST00000578910 POTEJP0CG39 1038 aa18.76■□□□□ 0.59
CCDC57-212ENST00000578910 GRAPQ13588 217 aa18.76■□□□□ 0.59
CCDC57-212ENST00000578910 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
CCDC57-212ENST00000578910 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-212ENST00000578910 L3MBTL3Q96JM7 780 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-212ENST00000578910 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-212ENST00000578910 DDX58O95786 925 aaKnown RBP18.75■□□□□ 0.59
CCDC57-212ENST00000578910 LARGE2Q8N3Y3 721 aa18.75■□□□□ 0.59
CCDC57-212ENST00000578910 MPNDQ8N594 471 aa18.75■□□□□ 0.59
CCDC57-212ENST00000578910 JARID2Q92833 1246 aaPredicted RBP18.75■□□□□ 0.59
CCDC57-212ENST00000578910 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
CCDC57-212ENST00000578910 EIF6P56537 245 aaKnown RBP18.74■□□□□ 0.59
CCDC57-212ENST00000578910 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
CCDC57-212ENST00000578910 G2E3Q7L622 706 aa18.74■□□□□ 0.59
CCDC57-212ENST00000578910 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
CCDC57-212ENST00000578910 CCDC191Q8NCU4 936 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms