RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
PTPRM-207ENST00000578571 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
PTPRM-207ENST00000578571 STIM2Q9P246 746 aa8.47□□□□□ -1.05
PTPRM-207ENST00000578571 PHF24Q9UPV7 400 aa8.47□□□□□ -1.05
PTPRM-207ENST00000578571 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
PTPRM-207ENST00000578571 GRNP28799 593 aaKnown RBP8.46□□□□□ -1.06
PTPRM-207ENST00000578571 IDH3AP50213 366 aa8.46□□□□□ -1.06
PTPRM-207ENST00000578571 CTBSQ01459 385 aa8.46□□□□□ -1.06
PTPRM-207ENST00000578571 TREML1Q86YW5 311 aa8.46□□□□□ -1.06
PTPRM-207ENST00000578571 BRD7Q9NPI1 651 aa8.46□□□□□ -1.06
PTPRM-207ENST00000578571 MTMR7Q9Y216 660 aa8.46□□□□□ -1.06
PTPRM-207ENST00000578571 GNEQ9Y223 722 aaKnown RBP8.46□□□□□ -1.06
PTPRM-207ENST00000578571 ZBTB39O15060 712 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 CD33P20138 364 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 INPP5BP32019 993 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 KCNQ4P56696 695 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 SFSWAPQ12872 951 aaKnown RBP8.45□□□□□ -1.06
PTPRM-207ENST00000578571 ZNF211Q13398 564 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-207ENST00000578571 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 GRIN2CQ14957 1233 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 CNTNAP3BQ96NU0 1288 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 CNTNAP3Q9BZ76 1288 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 MBIPQ9NS73 344 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 ERCC6Q03468 1493 aa8.45□□□□□ -1.06
PTPRM-207ENST00000578571 C2CD2LO14523 706 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 OPLAHO14841 1288 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 ABL1P00519 1130 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 NPR3P17342 541 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 MX2P20592 715 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 HOMEZQ8IX15 550 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 ANO2Q9NQ90 1003 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 EGFL7Q9UHF1 273 aa8.44□□□□□ -1.06
PTPRM-207ENST00000578571 WIPF1O43516 503 aa8.43□□□□□ -1.06
PTPRM-207ENST00000578571 MPSTP25325 297 aa8.43□□□□□ -1.06
PTPRM-207ENST00000578571 ARSDP51689 593 aa8.43□□□□□ -1.06
PTPRM-207ENST00000578571 KCNA1Q09470 495 aa8.43□□□□□ -1.06
PTPRM-207ENST00000578571 FAM182BQ5T319 152 aa8.43□□□□□ -1.06
PTPRM-207ENST00000578571 CCER1Q8TC90 406 aaPredicted RBP8.43□□□□□ -1.06
PTPRM-207ENST00000578571 MARK1Q9P0L2 795 aa8.43□□□□□ -1.06
PTPRM-207ENST00000578571 CEP164Q9UPV0 1460 aa8.43□□□□□ -1.06
PTPRM-207ENST00000578571 ICMTO60725 284 aa8.42□□□□□ -1.06
PTPRM-207ENST00000578571 FKBP4Q02790 459 aaKnown RBP eCLIP8.42□□□□□ -1.06
PTPRM-207ENST00000578571 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
PTPRM-207ENST00000578571 ECM1Q16610 540 aa8.42□□□□□ -1.06
PTPRM-207ENST00000578571 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
PTPRM-207ENST00000578571 KCNH4Q9UQ05 1017 aa8.42□□□□□ -1.06
PTPRM-207ENST00000578571 FANCD2Q9BXW9 1451 aa8.42□□□□□ -1.06
PTPRM-207ENST00000578571 NESP48681 1621 aa8.42□□□□□ -1.06
PTPRM-207ENST00000578571 IGF1RP08069 1367 aa8.41□□□□□ -1.06
PTPRM-207ENST00000578571 ZAP70P43403 619 aa8.41□□□□□ -1.06
PTPRM-207ENST00000578571 SRSF11Q05519 484 aaKnown RBP8.41□□□□□ -1.06
PTPRM-207ENST00000578571 USP20Q9Y2K6 914 aa8.41□□□□□ -1.06
PTPRM-207ENST00000578571 H3BRB1 525 aa8.4□□□□□ -1.06
PTPRM-207ENST00000578571 ADAMTS2O95450 1211 aa8.4□□□□□ -1.06
PTPRM-207ENST00000578571 EIF1AXP47813 144 aaKnown RBP8.4□□□□□ -1.06
PTPRM-207ENST00000578571 ATCAYQ86WG3 371 aa8.4□□□□□ -1.06
PTPRM-207ENST00000578571 SLC30A3Q99726 388 aa8.4□□□□□ -1.06
PTPRM-207ENST00000578571 TUT1Q9H6E5 874 aaKnown RBP8.4□□□□□ -1.06
PTPRM-207ENST00000578571 RTCBQ9Y3I0 505 aaKnown RBP8.4□□□□□ -1.06
PTPRM-207ENST00000578571 IVNS1ABPQ9Y6Y0 642 aa8.4□□□□□ -1.06
PTPRM-207ENST00000578571 FAM13AO94988 1023 aa8.39□□□□□ -1.07
PTPRM-207ENST00000578571 SLURP2P0DP57 97 aa8.39□□□□□ -1.07
PTPRM-207ENST00000578571 BMP4P12644 408 aa8.39□□□□□ -1.07
PTPRM-207ENST00000578571 NOM1Q5C9Z4 860 aaKnown RBP8.39□□□□□ -1.07
PTPRM-207ENST00000578571 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
PTPRM-207ENST00000578571 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
PTPRM-207ENST00000578571 SOWAHDA6NJG2 315 aa8.38□□□□□ -1.07
PTPRM-207ENST00000578571 EPB42P16452 691 aa8.38□□□□□ -1.07
PTPRM-207ENST00000578571 MAP2K3P46734 347 aa8.38□□□□□ -1.07
PTPRM-207ENST00000578571 SPEM2Q0P670 501 aa8.38□□□□□ -1.07
PTPRM-207ENST00000578571 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
PTPRM-207ENST00000578571 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
PTPRM-207ENST00000578571 KCNMB2Q9Y691 235 aa8.38□□□□□ -1.07
PTPRM-207ENST00000578571 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
PTPRM-207ENST00000578571 ZNF468Q5VIY5 522 aaPredicted RBP8.37□□□□□ -1.07
PTPRM-207ENST00000578571 GLYCTKQ8IVS8 523 aa8.37□□□□□ -1.07
PTPRM-207ENST00000578571 KCTD17Q8N5Z5 321 aa8.37□□□□□ -1.07
PTPRM-207ENST00000578571 GPR152Q8TDT2 470 aa8.37□□□□□ -1.07
PTPRM-207ENST00000578571 GSX2Q9BZM3 304 aa8.37□□□□□ -1.07
PTPRM-207ENST00000578571 KLF15Q9UIH9 416 aa8.37□□□□□ -1.07
PTPRM-207ENST00000578571 ARHGAP4P98171 946 aa8.36□□□□□ -1.07
PTPRM-207ENST00000578571 TRIP4Q15650 581 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-207ENST00000578571 RAB44Q7Z6P3 723 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-207ENST00000578571 CMTR1Q8N1G2 835 aaKnown RBP8.36□□□□□ -1.07
PTPRM-207ENST00000578571 ACDQ96AP0 544 aa8.36□□□□□ -1.07
PTPRM-207ENST00000578571 MRC2Q9UBG0 1479 aa8.36□□□□□ -1.07
PTPRM-207ENST00000578571 KIF21AQ7Z4S6 1674 aa8.36□□□□□ -1.07
PTPRM-207ENST00000578571 PATL2C9JE40 543 aaKnown RBP8.35□□□□□ -1.07
PTPRM-207ENST00000578571 FZD6O60353 706 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 EGFRP00533 1210 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 ARAFP10398 606 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 CCINQ13939 588 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 WHAMMQ8TF30 809 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 PIK3R5Q8WYR1 880 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 EDEM1Q92611 657 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 OXCT2Q9BYC2 517 aaPredicted RBP8.35□□□□□ -1.07
PTPRM-207ENST00000578571 C11orf16Q9NQ32 467 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 FAM13BQ9NYF5 915 aa8.35□□□□□ -1.07
PTPRM-207ENST00000578571 PDGFAP04085 211 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms