RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 NAA30Q147X3 362 aaPredicted RBP4.42□□□□□ -1.7
COPS3-213ENST00000577210 PIK3R5Q8WYR1 880 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 TUT1Q9H6E5 874 aaKnown RBP4.42□□□□□ -1.7
COPS3-213ENST00000577210 QTRT2Q9H974 415 aaKnown RBP4.42□□□□□ -1.7
COPS3-213ENST00000577210 BRPF3Q9ULD4 1205 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 PARP3Q9Y6F1 533 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 USP3Q9Y6I4 520 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 IGF1RP08069 1367 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 A0A1W2PNR3 127 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 RNF225M0QZC1 329 aaPredicted RBP4.41□□□□□ -1.7
COPS3-213ENST00000577210 LGR5O75473 907 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 SERPINB4P48594 390 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 ARSDP51689 593 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 SUSD3Q96L08 255 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 ZIC5Q96T25 663 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 NUCKS1Q9H1E3 243 aaKnown RBP4.41□□□□□ -1.7
COPS3-213ENST00000577210 MBIPQ9NS73 344 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 SEPT3Q9UH03 358 aa4.41□□□□□ -1.7
COPS3-213ENST00000577210 NSFL1CQ9UNZ2 370 aaKnown RBP4.41□□□□□ -1.7
COPS3-213ENST00000577210 DNMT3AQ9Y6K1 912 aaPredicted RBP4.41□□□□□ -1.7
COPS3-213ENST00000577210 MICAL2O94851 1124 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 ATP4AP20648 1035 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 MZF1P28698 734 aaPredicted RBP4.4□□□□□ -1.71
COPS3-213ENST00000577210 MARSP56192 900 aaKnown RBP4.4□□□□□ -1.71
COPS3-213ENST00000577210 ACDQ96AP0 544 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 DMRTB1Q96MA1 342 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 CFHR5Q9BXR6 569 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 GPAMQ9HCL2 828 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 PODXL2Q9NZ53 605 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 DCTN4Q9UJW0 460 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 PCDHGC4Q9Y5F7 938 aa4.4□□□□□ -1.71
COPS3-213ENST00000577210 ATXN7O15265 892 aaPredicted RBP4.39□□□□□ -1.71
COPS3-213ENST00000577210 FAM157BP0CG42 384 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 MPSTP25325 297 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 ZAP70P43403 619 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 KCNQ4P56696 695 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 MAP3K10Q02779 954 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
COPS3-213ENST00000577210 COL19A1Q14993 1142 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 LRRC69Q6ZNQ3 347 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 BTLAQ7Z6A9 289 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 TREML1Q86YW5 311 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 CEP63Q96MT8 703 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 PSMG3-AS1Q96PY0 264 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 LRFN2Q9ULH4 789 aa4.39□□□□□ -1.71
COPS3-213ENST00000577210 ATXN7L1Q9ULK2 861 aaPredicted RBP4.39□□□□□ -1.71
COPS3-213ENST00000577210 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 TNFRSF10BO14763 440 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 MAPK1P28482 360 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 EIF1AXP47813 144 aaKnown RBP4.38□□□□□ -1.71
COPS3-213ENST00000577210 IDH3AP50213 366 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 PCSK7Q16549 785 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 FAM182BQ5T319 152 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 SH3PXD2AQ5TCZ1 1133 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 GPAT2Q6NUI2 795 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 C7orf43Q8WVR3 580 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 RBCK1Q9BYM8 510 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 SAP130Q9H0E3 1048 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 RUBCNLQ9H714 662 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 BRD7Q9NPI1 651 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 KLK14Q9P0G3 267 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 KCNH4Q9UQ05 1017 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 CNTNAP5Q8WYK1 1306 aa4.38□□□□□ -1.71
COPS3-213ENST00000577210 MX2P20592 715 aa4.37□□□□□ -1.71
COPS3-213ENST00000577210 INPP5BP32019 993 aa4.37□□□□□ -1.71
COPS3-213ENST00000577210 UBAP2LQ14157 1087 aaKnown RBP4.37□□□□□ -1.71
COPS3-213ENST00000577210 PDE12Q6L8Q7 609 aaKnown RBP4.37□□□□□ -1.71
COPS3-213ENST00000577210 TMC1Q8TDI8 760 aa4.37□□□□□ -1.71
COPS3-213ENST00000577210 PMEPA1Q969W9 287 aa4.37□□□□□ -1.71
COPS3-213ENST00000577210 ZCCHC2Q9C0B9 1178 aaKnown RBP4.37□□□□□ -1.71
COPS3-213ENST00000577210 MARK1Q9P0L2 795 aa4.37□□□□□ -1.71
COPS3-213ENST00000577210 IGHA1P01876 353 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 BCRP11274 1271 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 MFAP1P55081 439 aaKnown RBP4.36□□□□□ -1.71
COPS3-213ENST00000577210 ARHGAP4P98171 946 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 TYRO3Q06418 890 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 KANK3Q6NY19 840 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 XKR5Q6UX68 686 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 CAPN12Q6ZSI9 719 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 KRTAP1-3Q8IUG1 177 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 ETFBKMTQ8IXQ9 262 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 RGL4Q8IZJ4 473 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 SCARF2Q96GP6 870 aaPredicted RBP4.36□□□□□ -1.71
COPS3-213ENST00000577210 ASB16Q96NS5 453 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 PNMA5Q96PV4 448 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 ANO2Q9NQ90 1003 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 AVENQ9NQS1 362 aaPredicted RBP4.36□□□□□ -1.71
COPS3-213ENST00000577210 DMGDHQ9UI17 866 aaKnown RBP4.36□□□□□ -1.71
COPS3-213ENST00000577210 AMOTL2Q9Y2J4 779 aa4.36□□□□□ -1.71
COPS3-213ENST00000577210 KHNYNO15037 678 aaKnown RBP4.35□□□□□ -1.71
COPS3-213ENST00000577210 EFSO43281 561 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 EGFRP00533 1210 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 ITGB2P05107 769 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 MAP2K3P46734 347 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 DNM1Q05193 864 aaKnown RBP4.35□□□□□ -1.71
COPS3-213ENST00000577210 TNP2Q05952 138 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 C1orf229Q6ZS94 237 aaPredicted RBP4.35□□□□□ -1.71
COPS3-213ENST00000577210 NEDD1Q8NHV4 660 aa4.35□□□□□ -1.71
COPS3-213ENST00000577210 EDEM1Q92611 657 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms