RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ANKRD36CQ5JPF3 1778 aa21.99■■□□□ 1.11
LITAF-212ENST00000573332 IGKV5-2P06315 115 aa21.99■■□□□ 1.11
LITAF-212ENST00000573332 BCL2L13Q9BXK5 485 aa21.99■■□□□ 1.11
LITAF-212ENST00000573332 DPEP1P16444 411 aa21.98■■□□□ 1.11
LITAF-212ENST00000573332 KCNA3P22001 575 aa21.98■■□□□ 1.11
LITAF-212ENST00000573332 ERFEQ4G0M1 354 aa21.98■■□□□ 1.11
LITAF-212ENST00000573332 NUTM1Q86Y26 1132 aa21.98■■□□□ 1.11
LITAF-212ENST00000573332 CCDC24Q8N4L8 307 aa21.98■■□□□ 1.11
LITAF-212ENST00000573332 TRMT112Q9UI30 125 aaKnown RBP21.98■■□□□ 1.11
LITAF-212ENST00000573332 A0A0G2JLW4 131 aa21.97■■□□□ 1.11
LITAF-212ENST00000573332 LINS1Q8NG48 757 aa21.97■■□□□ 1.11
LITAF-212ENST00000573332 CWC25Q9NXE8 425 aaPredicted RBP21.97■■□□□ 1.11
LITAF-212ENST00000573332 SH3TC1Q8TE82 1336 aa21.97■■□□□ 1.11
LITAF-212ENST00000573332 NEURL1BA8MQ27 555 aa21.96■■□□□ 1.11
LITAF-212ENST00000573332 F6X3S4 739 aa21.96■■□□□ 1.11
LITAF-212ENST00000573332 H0YIN7 160 aa21.96■■□□□ 1.11
LITAF-212ENST00000573332 KIAA1551Q9HCM1 1747 aa21.96■■□□□ 1.11
LITAF-212ENST00000573332 ABCC12Q96J65 1359 aa21.96■■□□□ 1.11
LITAF-212ENST00000573332 CHRNA5P30532 468 aa21.95■■□□□ 1.1
LITAF-212ENST00000573332 BEND3Q5T5X7 828 aa21.95■■□□□ 1.1
LITAF-212ENST00000573332 C2CD5Q86YS7 1000 aa21.95■■□□□ 1.1
LITAF-212ENST00000573332 ZBTB38Q8NAP3 1195 aaPredicted RBP21.95■■□□□ 1.1
LITAF-212ENST00000573332 ARHGAP45Q92619 1136 aa21.95■■□□□ 1.1
LITAF-212ENST00000573332 KIF16BQ96L93 1317 aa21.95■■□□□ 1.1
LITAF-212ENST00000573332 PCCAP05165 728 aaPredicted RBP21.94■■□□□ 1.1
LITAF-212ENST00000573332 SRGNP10124 158 aa21.94■■□□□ 1.1
LITAF-212ENST00000573332 CWF19L2Q2TBE0 894 aaKnown RBP21.94■■□□□ 1.1
LITAF-212ENST00000573332 PIM2Q9P1W9 311 aa21.94■■□□□ 1.1
LITAF-212ENST00000573332 NOB1Q9ULX3 412 aaKnown RBP21.94■■□□□ 1.1
LITAF-212ENST00000573332 CRY2Q49AN0 593 aa21.93■■□□□ 1.1
LITAF-212ENST00000573332 FAM89AQ96GI7 184 aa21.93■■□□□ 1.1
LITAF-212ENST00000573332 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
LITAF-212ENST00000573332 ANKRD31Q8N7Z5 1873 aa21.92■■□□□ 1.1
LITAF-212ENST00000573332 BCAR3O75815 825 aa21.92■■□□□ 1.1
LITAF-212ENST00000573332 ALDH1L1O75891 902 aa21.92■■□□□ 1.1
LITAF-212ENST00000573332 GCKRQ14397 625 aa21.92■■□□□ 1.1
LITAF-212ENST00000573332 SYNE4Q8N205 404 aa21.92■■□□□ 1.1
LITAF-212ENST00000573332 NLRP3Q96P20 1036 aa21.92■■□□□ 1.1
LITAF-212ENST00000573332 API5Q9BZZ5 524 aaKnown RBP21.92■■□□□ 1.1
LITAF-212ENST00000573332 H7C1W4 665 aa21.91■■□□□ 1.1
LITAF-212ENST00000573332 HSP90B1P14625 803 aaKnown RBP21.91■■□□□ 1.1
LITAF-212ENST00000573332 STYK1Q6J9G0 422 aa21.91■■□□□ 1.1
LITAF-212ENST00000573332 MASTLQ96GX5 879 aa21.91■■□□□ 1.1
LITAF-212ENST00000573332 CDHR2Q9BYE9 1310 aa21.9■■□□□ 1.1
LITAF-212ENST00000573332 IPO8O15397 1037 aaKnown RBP21.9■■□□□ 1.1
LITAF-212ENST00000573332 NPR1P16066 1061 aa21.9■■□□□ 1.1
LITAF-212ENST00000573332 SRCIN1Q9C0H9 1055 aa21.9■■□□□ 1.1
LITAF-212ENST00000573332 DCAF8L1A6NGE4 600 aa21.89■■□□□ 1.09
LITAF-212ENST00000573332 IRS4O14654 1257 aaPredicted RBP21.89■■□□□ 1.09
LITAF-212ENST00000573332 HCLS1P14317 486 aaPredicted RBP21.89■■□□□ 1.09
LITAF-212ENST00000573332 HOXA10P31260 410 aaPredicted RBP21.89■■□□□ 1.09
LITAF-212ENST00000573332 SLC4A10Q6U841 1118 aa21.89■■□□□ 1.09
LITAF-212ENST00000573332 DALRD3Q5D0E6 543 aaKnown RBP21.88■■□□□ 1.09
LITAF-212ENST00000573332 TTLL6Q8N841 843 aa21.88■■□□□ 1.09
LITAF-212ENST00000573332 CNKSR1Q969H4 720 aa21.88■■□□□ 1.09
LITAF-212ENST00000573332 N4BP2Q86UW6 1770 aaPredicted RBP21.88■■□□□ 1.09
LITAF-212ENST00000573332 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.09
LITAF-212ENST00000573332 CASP7P55210 303 aa21.87■■□□□ 1.09
LITAF-212ENST00000573332 SF3B3Q15393 1217 aaKnown RBP21.87■■□□□ 1.09
LITAF-212ENST00000573332 GPR162Q16538 588 aa21.87■■□□□ 1.09
LITAF-212ENST00000573332 C3orf67Q6ZVT6 689 aa21.87■■□□□ 1.09
LITAF-212ENST00000573332 ZNF622Q969S3 477 aaKnown RBP eCLIP21.87■■□□□ 1.09
LITAF-212ENST00000573332 PDE8AO60658 829 aa21.86■■□□□ 1.09
LITAF-212ENST00000573332 ALDH1B1P30837 517 aa21.86■■□□□ 1.09
LITAF-212ENST00000573332 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
LITAF-212ENST00000573332 ATF7IPQ6VMQ6 1270 aa21.86■■□□□ 1.09
LITAF-212ENST00000573332 BCS1LQ9Y276 419 aa21.86■■□□□ 1.09
LITAF-212ENST00000573332 TNRC6CQ9HCJ0 1690 aaKnown RBP21.85■■□□□ 1.09
LITAF-212ENST00000573332 DLEC1Q9Y238 1755 aa21.85■■□□□ 1.09
LITAF-212ENST00000573332 GRIN3BO60391 1043 aa21.85■■□□□ 1.09
LITAF-212ENST00000573332 CCT4P50991 539 aaKnown RBP21.85■■□□□ 1.09
LITAF-212ENST00000573332 CRAMP1Q96RY5 1269 aa21.85■■□□□ 1.09
LITAF-212ENST00000573332 PLA2G12BQ9BX93 195 aa21.85■■□□□ 1.09
LITAF-212ENST00000573332 RCAN3Q9UKA8 241 aa21.85■■□□□ 1.09
LITAF-212ENST00000573332 COL11A2P13942 1736 aaPredicted RBP21.84■■□□□ 1.09
LITAF-212ENST00000573332 GRM8O00222 908 aa21.84■■□□□ 1.09
LITAF-212ENST00000573332 TRIM27P14373 513 aa21.84■■□□□ 1.09
LITAF-212ENST00000573332 ZKSCAN2Q63HK3 967 aa21.84■■□□□ 1.09
LITAF-212ENST00000573332 UBE3BQ7Z3V4 1068 aa21.84■■□□□ 1.09
LITAF-212ENST00000573332 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
LITAF-212ENST00000573332 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
LITAF-212ENST00000573332 FRAT1Q92837 279 aaPredicted RBP21.84■■□□□ 1.09
LITAF-212ENST00000573332 RBM17Q96I25 401 aaKnown RBP21.84■■□□□ 1.09
LITAF-212ENST00000573332 BRCA1P38398 1863 aaKnown RBP21.83■■□□□ 1.09
LITAF-212ENST00000573332 UTYO14607 1347 aa21.83■■□□□ 1.09
LITAF-212ENST00000573332 ABCC4O15439 1325 aa21.83■■□□□ 1.09
LITAF-212ENST00000573332 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.09
LITAF-212ENST00000573332 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.09
LITAF-212ENST00000573332 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
LITAF-212ENST00000573332 C9orf78Q9NZ63 289 aaPredicted RBP21.82■■□□□ 1.08
LITAF-212ENST00000573332 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
LITAF-212ENST00000573332 DDX60Q8IY21 1712 aaKnown RBP21.8■■□□□ 1.08
LITAF-212ENST00000573332 DDX46Q7L014 1031 aaKnown RBP21.8■■□□□ 1.08
LITAF-212ENST00000573332 C7orf43Q8WVR3 580 aa21.8■■□□□ 1.08
LITAF-212ENST00000573332 USP44Q9H0E7 712 aa21.8■■□□□ 1.08
LITAF-212ENST00000573332 CTSWP56202 376 aa21.79■■□□□ 1.08
LITAF-212ENST00000573332 CCDC152Q4G0S7 254 aa21.79■■□□□ 1.08
LITAF-212ENST00000573332 TTLL11Q8NHH1 800 aa21.79■■□□□ 1.08
LITAF-212ENST00000573332 LAMB2P55268 1798 aa21.79■■□□□ 1.08
LITAF-212ENST00000573332 BBOX1O75936 387 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms