RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 ABCC12Q96J65 1359 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 APAF1O14727 1248 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 NTSR2O95665 410 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 JDP2Q8WYK2 163 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 ZNF277Q9NRM2 450 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
NPLOC4-204ENST00000570324 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 HOXB7P09629 217 aa11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 HOXA10P31260 410 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 IARSP41252 1262 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 GNAI1P63096 354 aa11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 CRY2Q49AN0 593 aa11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 OLFM4Q6UX06 510 aa11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 RNF123Q5XPI4 1314 aa11.59□□□□□ -0.55
NPLOC4-204ENST00000570324 PPEF1O14829 653 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-204ENST00000570324 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
NPLOC4-204ENST00000570324 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
NPLOC4-204ENST00000570324 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.56
NPLOC4-204ENST00000570324 CRAMP1Q96RY5 1269 aa11.58□□□□□ -0.56
NPLOC4-204ENST00000570324 HYPKQ9NX55 129 aa11.58□□□□□ -0.56
NPLOC4-204ENST00000570324 RIC1Q4ADV7 1423 aa11.58□□□□□ -0.56
NPLOC4-204ENST00000570324 WDR90Q96KV7 1748 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 EIF6P56537 245 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 SLC10A5Q5PT55 438 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 NLRP10Q86W26 655 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 PSMD1Q99460 953 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 MBIPQ9NS73 344 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
NPLOC4-204ENST00000570324 POTECB2RU33 542 aa11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 HTRA3P83110 453 aa11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 DDX46Q7L014 1031 aaKnown RBP11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 PLBD2Q8NHP8 589 aa11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
NPLOC4-204ENST00000570324 ANP32CO43423 234 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 BBOX1O75936 387 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 EAPPQ56P03 285 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 C3orf67Q6ZVT6 689 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 RIC3Q7Z5B4 369 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 DNAJC5GQ8N7S2 189 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 KLRG1Q96E93 195 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 GJA3Q9Y6H8 435 aa11.55□□□□□ -0.56
NPLOC4-204ENST00000570324 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 ATP5J2-PTCD1G3V325 749 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 NIM1KQ8IY84 436 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 GPC2Q8N158 579 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 SUPT20HQ8NEM7 779 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 ZNF428Q96B54 188 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 L3MBTL3Q96JM7 780 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 ATP6V0A2Q9Y487 856 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 ABCC4O15439 1325 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 ZNF541Q9H0D2 1346 aa11.54□□□□□ -0.56
NPLOC4-204ENST00000570324 FZD9O00144 591 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 PPIP5K2O43314 1243 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 DDX58O95786 925 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 ZNF853P0CG23 659 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 LMOD1P29536 600 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 EPHX2P34913 555 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 DPP8Q6V1X1 898 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 SP8Q8IXZ3 490 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 MPNDQ8N594 471 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 TAF1DQ9H5J8 278 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 MRS2Q9HD23 443 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 SCN4AP35499 1836 aa11.53□□□□□ -0.56
NPLOC4-204ENST00000570324 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-204ENST00000570324 GRAPQ13588 217 aa11.52□□□□□ -0.57
NPLOC4-204ENST00000570324 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-204ENST00000570324 CCDC30Q5VVM6 783 aa11.52□□□□□ -0.57
NPLOC4-204ENST00000570324 GRAPLQ8TC17 118 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-204ENST00000570324 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
NPLOC4-204ENST00000570324 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 AOC3Q16853 763 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 CCDC184Q52MB2 194 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 TMC4Q7Z404 712 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 C8orf58Q8NAV2 365 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 ISCA1Q9BUE6 129 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 STK31Q9BXU1 1019 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 VPS33BQ9H267 617 aa11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-204ENST00000570324 IRS4O14654 1257 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms