RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
PKD1-236ENST00000568796 CRY2Q49AN0 593 aa20.32■□□□□ 0.84
PKD1-236ENST00000568796 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
PKD1-236ENST00000568796 CNTROBQ8N137 903 aa20.32■□□□□ 0.84
PKD1-236ENST00000568796 GPC2Q8N158 579 aa20.32■□□□□ 0.84
PKD1-236ENST00000568796 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
PKD1-236ENST00000568796 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
PKD1-236ENST00000568796 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
PKD1-236ENST00000568796 RBM17Q96I25 401 aaKnown RBP20.31■□□□□ 0.84
PKD1-236ENST00000568796 LMOD1P29536 600 aaPredicted RBP20.3■□□□□ 0.84
PKD1-236ENST00000568796 LARGE2Q8N3Y3 721 aa20.3■□□□□ 0.84
PKD1-236ENST00000568796 UBN2Q6ZU65 1347 aa20.29■□□□□ 0.84
PKD1-236ENST00000568796 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
PKD1-236ENST00000568796 NUP98P52948 1817 aa20.28■□□□□ 0.84
PKD1-236ENST00000568796 PPEF1O14829 653 aaPredicted RBP20.28■□□□□ 0.84
PKD1-236ENST00000568796 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
PKD1-236ENST00000568796 TMX4Q9H1E5 349 aaPredicted RBP20.28■□□□□ 0.84
PKD1-236ENST00000568796 PNNQ9H307 717 aaKnown RBP20.28■□□□□ 0.84
PKD1-236ENST00000568796 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
PKD1-236ENST00000568796 ABT1Q9ULW3 272 aaKnown RBP20.28■□□□□ 0.84
PKD1-236ENST00000568796 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
PKD1-236ENST00000568796 KDM3BQ7LBC6 1761 aa20.27■□□□□ 0.84
PKD1-236ENST00000568796 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
PKD1-236ENST00000568796 CTCFP49711 727 aaPredicted RBP20.27■□□□□ 0.84
PKD1-236ENST00000568796 DEFB115Q30KQ5 88 aa20.27■□□□□ 0.84
PKD1-236ENST00000568796 GRIPAP1Q4V328 841 aa20.27■□□□□ 0.84
PKD1-236ENST00000568796 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
PKD1-236ENST00000568796 ZNF34Q8IZ26 560 aa20.27■□□□□ 0.84
PKD1-236ENST00000568796 IBTKQ9P2D0 1353 aaPredicted RBP20.26■□□□□ 0.83
PKD1-236ENST00000568796 NTSR2O95665 410 aa20.26■□□□□ 0.83
PKD1-236ENST00000568796 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
PKD1-236ENST00000568796 CRAMP1Q96RY5 1269 aa20.26■□□□□ 0.83
PKD1-236ENST00000568796 SNED1Q8TER0 1413 aa20.26■□□□□ 0.83
PKD1-236ENST00000568796 C3orf67Q6ZVT6 689 aa20.25■□□□□ 0.83
PKD1-236ENST00000568796 SLC51AQ86UW1 340 aa20.25■□□□□ 0.83
PKD1-236ENST00000568796 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
PKD1-236ENST00000568796 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
PKD1-236ENST00000568796 PRDM10Q9NQV6 1147 aa20.25■□□□□ 0.83
PKD1-236ENST00000568796 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
PKD1-236ENST00000568796 EPS15P42566 896 aa20.24■□□□□ 0.83
PKD1-236ENST00000568796 PARP10Q53GL7 1025 aa20.24■□□□□ 0.83
PKD1-236ENST00000568796 PAXIP1Q6ZW49 1069 aaPredicted RBP20.24■□□□□ 0.83
PKD1-236ENST00000568796 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
PKD1-236ENST00000568796 COL4A5P29400 1685 aa20.23■□□□□ 0.83
PKD1-236ENST00000568796 RASSF10A6NK89 507 aa20.23■□□□□ 0.83
PKD1-236ENST00000568796 LBX1P52954 281 aa20.23■□□□□ 0.83
PKD1-236ENST00000568796 RIC1Q4ADV7 1423 aa20.23■□□□□ 0.83
PKD1-236ENST00000568796 UTP14AQ9BVJ6 771 aaKnown RBP20.23■□□□□ 0.83
PKD1-236ENST00000568796 DDX21Q9NR30 783 aaKnown RBP eCLIP20.23■□□□□ 0.83
PKD1-236ENST00000568796 WBP1LQ9NX94 342 aa20.23■□□□□ 0.83
PKD1-236ENST00000568796 ADAMTSL1Q8N6G6 1762 aa20.23■□□□□ 0.83
PKD1-236ENST00000568796 ANXA1P04083 346 aa20.22■□□□□ 0.83
PKD1-236ENST00000568796 SCNN1DP51172 638 aa20.22■□□□□ 0.83
PKD1-236ENST00000568796 RIPK4P57078 832 aa20.22■□□□□ 0.83
PKD1-236ENST00000568796 AOC3Q16853 763 aa20.22■□□□□ 0.83
PKD1-236ENST00000568796 WDR33Q9C0J8 1336 aaKnown RBP20.22■□□□□ 0.83
PKD1-236ENST00000568796 GRM1Q13255 1194 aa20.21■□□□□ 0.83
PKD1-236ENST00000568796 NECTIN2Q92692 538 aa20.21■□□□□ 0.83
PKD1-236ENST00000568796 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.82
PKD1-236ENST00000568796 PROSER3Q2NL68 480 aa20.2■□□□□ 0.82
PKD1-236ENST00000568796 ATP6V0A2Q9Y487 856 aa20.2■□□□□ 0.82
PKD1-236ENST00000568796 MAP2K1Q02750 393 aaPredicted RBP20.19■□□□□ 0.82
PKD1-236ENST00000568796 AIMP1Q12904 312 aaKnown RBP20.19■□□□□ 0.82
PKD1-236ENST00000568796 USP50Q70EL3 339 aaPredicted RBP20.19■□□□□ 0.82
PKD1-236ENST00000568796 PDIA6Q15084 440 aa20.18■□□□□ 0.82
PKD1-236ENST00000568796 SLC10A5Q5PT55 438 aa20.18■□□□□ 0.82
PKD1-236ENST00000568796 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
PKD1-236ENST00000568796 ABCC4O15439 1325 aa20.18■□□□□ 0.82
PKD1-236ENST00000568796 LTBP1Q14766 1721 aa20.18■□□□□ 0.82
PKD1-236ENST00000568796 TRAF5O00463 557 aa20.17■□□□□ 0.82
PKD1-236ENST00000568796 HSPA8P11142 646 aaKnown RBP20.17■□□□□ 0.82
PKD1-236ENST00000568796 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
PKD1-236ENST00000568796 HSP90AB3PQ58FF7 597 aa20.17■□□□□ 0.82
PKD1-236ENST00000568796 DPP8Q6V1X1 898 aaPredicted RBP20.17■□□□□ 0.82
PKD1-236ENST00000568796 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
PKD1-236ENST00000568796 LRP10Q7Z4F1 713 aa20.17■□□□□ 0.82
PKD1-236ENST00000568796 ECE1P42892 770 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 LMOD3Q0VAK6 560 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 XAGE3Q8WTP9 111 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 CAPNS2Q96L46 248 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 BEGAINQ9BUH8 593 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 VPS33BQ9H267 617 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 ADARB2Q9NS39 739 aaKnown RBP20.16■□□□□ 0.82
PKD1-236ENST00000568796 GPRC5DQ9NZD1 345 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 ZNRF3Q9ULT6 936 aa20.16■□□□□ 0.82
PKD1-236ENST00000568796 BBOX1O75936 387 aa20.15■□□□□ 0.82
PKD1-236ENST00000568796 CXCL9Q07325 125 aa20.15■□□□□ 0.82
PKD1-236ENST00000568796 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
PKD1-236ENST00000568796 CYP4F22Q6NT55 531 aa20.15■□□□□ 0.82
PKD1-236ENST00000568796 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
PKD1-236ENST00000568796 MPNDQ8N594 471 aa20.15■□□□□ 0.82
PKD1-236ENST00000568796 ZNF428Q96B54 188 aa20.15■□□□□ 0.82
PKD1-236ENST00000568796 TRMT112Q9UI30 125 aaKnown RBP20.15■□□□□ 0.82
PKD1-236ENST00000568796 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
PKD1-236ENST00000568796 GMPSP49915 693 aaPredicted RBP20.14■□□□□ 0.81
PKD1-236ENST00000568796 NLRP10Q86W26 655 aa20.14■□□□□ 0.81
PKD1-236ENST00000568796 SP8Q8IXZ3 490 aa20.14■□□□□ 0.81
PKD1-236ENST00000568796 GPR101Q96P66 508 aaPredicted RBP20.14■□□□□ 0.81
PKD1-236ENST00000568796 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
PKD1-236ENST00000568796 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms