RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 EVI5LQ96CN4 794 aa22.02■■□□□ 1.12
SMPD3-211ENST00000568373 TLR7Q9NYK1 1049 aaKnown RBP22.02■■□□□ 1.11
SMPD3-211ENST00000568373 BCL9O00512 1426 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 RAD50Q92878 1312 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 EXOC5O00471 708 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 HSPA4P34932 840 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 NEK4P51957 841 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 FOXO4P98177 505 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 DNAJC10Q8IXB1 793 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 DIAPH3Q9NSV4 1193 aa22.01■■□□□ 1.11
SMPD3-211ENST00000568373 LMBR1LQ6UX01 489 aa22■■□□□ 1.11
SMPD3-211ENST00000568373 CWC27Q6UX04 472 aaKnown RBP22■■□□□ 1.11
SMPD3-211ENST00000568373 STARD3NLO95772 234 aa22■■□□□ 1.11
SMPD3-211ENST00000568373 RUFY2Q8WXA3 655 aa22■■□□□ 1.11
SMPD3-211ENST00000568373 TNPO1Q92973 898 aaKnown RBP22■■□□□ 1.11
SMPD3-211ENST00000568373 LSG1Q9H089 658 aaKnown RBP21.99■■□□□ 1.11
SMPD3-211ENST00000568373 NUTM2BA6NNL0 878 aaPredicted RBP21.99■■□□□ 1.11
SMPD3-211ENST00000568373 NUTM2EB1AL46 878 aaPredicted RBP21.99■■□□□ 1.11
SMPD3-211ENST00000568373 MCM2P49736 904 aa21.99■■□□□ 1.11
SMPD3-211ENST00000568373 NUTM2AQ8IVF1 878 aaPredicted RBP21.99■■□□□ 1.11
SMPD3-211ENST00000568373 KAT6BQ8WYB5 2073 aa21.98■■□□□ 1.11
SMPD3-211ENST00000568373 KIAA1211Q6ZU35 1233 aa21.98■■□□□ 1.11
SMPD3-211ENST00000568373 ISCA1Q9BUE6 129 aa21.98■■□□□ 1.11
SMPD3-211ENST00000568373 TFCP2Q12800 502 aa21.97■■□□□ 1.11
SMPD3-211ENST00000568373 TNNI3KQ59H18 835 aa21.97■■□□□ 1.11
SMPD3-211ENST00000568373 FPGT-TNNI3KV9GXZ4 949 aa21.97■■□□□ 1.11
SMPD3-211ENST00000568373 NRAPQ86VF7 1730 aa21.97■■□□□ 1.11
SMPD3-211ENST00000568373 TCIRG1Q13488 830 aa21.97■■□□□ 1.11
SMPD3-211ENST00000568373 CDCA7Q9BWT1 371 aaPredicted RBP21.97■■□□□ 1.11
SMPD3-211ENST00000568373 ADAMTS2O95450 1211 aa21.96■■□□□ 1.11
SMPD3-211ENST00000568373 KIF6Q6ZMV9 814 aa21.96■■□□□ 1.11
SMPD3-211ENST00000568373 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
SMPD3-211ENST00000568373 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
SMPD3-211ENST00000568373 ZNF330Q9Y3S2 320 aaPredicted RBP21.96■■□□□ 1.11
SMPD3-211ENST00000568373 DDX11L8A8MPP1 907 aa21.95■■□□□ 1.11
SMPD3-211ENST00000568373 HIP1O00291 1037 aa21.95■■□□□ 1.11
SMPD3-211ENST00000568373 BOLA2Q9H3K6 86 aa21.95■■□□□ 1.11
SMPD3-211ENST00000568373 CWC22Q9HCG8 908 aaKnown RBP21.95■■□□□ 1.11
SMPD3-211ENST00000568373 DBNLQ9UJU6 430 aaKnown RBP21.95■■□□□ 1.11
SMPD3-211ENST00000568373 TRIM28Q13263 835 aaKnown RBP21.95■■□□□ 1.1
SMPD3-211ENST00000568373 GBP4Q96PP9 640 aa21.95■■□□□ 1.1
SMPD3-211ENST00000568373 SPATA31A1Q5TZJ5 1347 aa21.95■■□□□ 1.1
SMPD3-211ENST00000568373 THRAP3Q9Y2W1 955 aaKnown RBP21.94■■□□□ 1.1
SMPD3-211ENST00000568373 SLC4A9Q96Q91 983 aa21.94■■□□□ 1.1
SMPD3-211ENST00000568373 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.94■■□□□ 1.1
SMPD3-211ENST00000568373 ATP5JP18859 108 aa21.93■■□□□ 1.1
SMPD3-211ENST00000568373 SYTL4Q96C24 671 aaPredicted RBP21.93■■□□□ 1.1
SMPD3-211ENST00000568373 TMX3Q96JJ7 454 aa21.93■■□□□ 1.1
SMPD3-211ENST00000568373 DOT1LQ8TEK3 1739 aa21.93■■□□□ 1.1
SMPD3-211ENST00000568373 CYP19A1P11511 503 aaPredicted RBP21.92■■□□□ 1.1
SMPD3-211ENST00000568373 SNX14Q9Y5W7 946 aa21.92■■□□□ 1.1
SMPD3-211ENST00000568373 MAP3K15Q6ZN16 1313 aa21.92■■□□□ 1.1
SMPD3-211ENST00000568373 NUCB2P80303 420 aa21.92■■□□□ 1.1
SMPD3-211ENST00000568373 UPF3BQ9BZI7 483 aaKnown RBP21.92■■□□□ 1.1
SMPD3-211ENST00000568373 SSFA2P28290 1259 aa21.91■■□□□ 1.1
SMPD3-211ENST00000568373 ATG9AQ7Z3C6 839 aa21.91■■□□□ 1.1
SMPD3-211ENST00000568373 ZGPATQ8N5A5 531 aaKnown RBP21.91■■□□□ 1.1
SMPD3-211ENST00000568373 FSD1Q9BTV5 496 aa21.91■■□□□ 1.1
SMPD3-211ENST00000568373 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
SMPD3-211ENST00000568373 CLEC17AQ6ZS10 378 aa21.9■■□□□ 1.1
SMPD3-211ENST00000568373 SNRKQ9NRH2 765 aa21.9■■□□□ 1.1
SMPD3-211ENST00000568373 IL15P40933 162 aaPredicted RBP21.89■■□□□ 1.1
SMPD3-211ENST00000568373 PTH1RQ03431 593 aa21.89■■□□□ 1.1
SMPD3-211ENST00000568373 NMIQ13287 307 aaPredicted RBP21.89■■□□□ 1.1
SMPD3-211ENST00000568373 DDB1Q16531 1140 aa21.89■■□□□ 1.1
SMPD3-211ENST00000568373 GIGYF2Q6Y7W6 1299 aaKnown RBP21.89■■□□□ 1.1
SMPD3-211ENST00000568373 FAM227BQ96M60 508 aa21.89■■□□□ 1.1
SMPD3-211ENST00000568373 DBNDD2Q9BQY9 259 aa21.89■■□□□ 1.1
SMPD3-211ENST00000568373 TRAK2O60296 914 aa21.89■■□□□ 1.09
SMPD3-211ENST00000568373 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.09
SMPD3-211ENST00000568373 CYP2E1P05181 493 aaPredicted RBP21.89■■□□□ 1.09
SMPD3-211ENST00000568373 CUL4AQ13619 759 aa21.89■■□□□ 1.09
SMPD3-211ENST00000568373 RASEFQ8IZ41 740 aa21.89■■□□□ 1.09
SMPD3-211ENST00000568373 GPR108Q9NPR9 543 aa21.89■■□□□ 1.09
SMPD3-211ENST00000568373 CCDC171Q6TFL3 1326 aa21.88■■□□□ 1.09
SMPD3-211ENST00000568373 EYA2O00167 538 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 CIAO1O76071 339 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 ZBTB38Q8NAP3 1195 aaPredicted RBP21.87■■□□□ 1.09
SMPD3-211ENST00000568373 ARXQ96QS3 562 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 ZBTB1Q9Y2K1 713 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 JCADQ9P266 1359 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 NWD2Q9ULI1 1742 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 SPATA31A5Q5VU36 1347 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 SPATA31A7Q8IWB4 1347 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 PLA2G12BQ9BX93 195 aa21.87■■□□□ 1.09
SMPD3-211ENST00000568373 A0A0D9SFI3 127 aa21.86■■□□□ 1.09
SMPD3-211ENST00000568373 HSP90AB3PQ58FF7 597 aa21.86■■□□□ 1.09
SMPD3-211ENST00000568373 KCNB2Q92953 911 aa21.86■■□□□ 1.09
SMPD3-211ENST00000568373 RFX7Q2KHR2 1363 aa21.86■■□□□ 1.09
SMPD3-211ENST00000568373 HLFQ16534 295 aa21.86■■□□□ 1.09
SMPD3-211ENST00000568373 EDC3Q96F86 508 aaKnown RBP21.86■■□□□ 1.09
SMPD3-211ENST00000568373 FAM89AQ96GI7 184 aa21.86■■□□□ 1.09
SMPD3-211ENST00000568373 INTS4Q96HW7 963 aaKnown RBP21.86■■□□□ 1.09
SMPD3-211ENST00000568373 ZNF594Q96JF6 807 aaPredicted RBP21.86■■□□□ 1.09
SMPD3-211ENST00000568373 HAUS7Q99871 368 aa21.86■■□□□ 1.09
SMPD3-211ENST00000568373 ANKRD36CQ5JPF3 1778 aa21.85■■□□□ 1.09
SMPD3-211ENST00000568373 MED23Q9ULK4 1368 aa21.85■■□□□ 1.09
SMPD3-211ENST00000568373 PTMSP20962 102 aa21.85■■□□□ 1.09
SMPD3-211ENST00000568373 CCDC57Q2TAC2 916 aa21.85■■□□□ 1.09
SMPD3-211ENST00000568373 LRRC24Q50LG9 513 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms