RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	PLBD2	Q8NHP8	589 aa		12.19	□□□□□ -0.46
KIFC3-231	ENST00000567479	RBM46	Q8TBY0	533 aa	Known RBP	12.19	□□□□□ -0.46
KIFC3-231	ENST00000567479	RBM17	Q96I25	401 aa	Known RBP	12.19	□□□□□ -0.46
KIFC3-231	ENST00000567479	MRS2	Q9HD23	443 aa		12.19	□□□□□ -0.46
KIFC3-231	ENST00000567479	HYPK	Q9NX55	129 aa		12.19	□□□□□ -0.46
KIFC3-231	ENST00000567479	DLEC1	Q9Y238	1755 aa		12.18	□□□□□ -0.46
KIFC3-231	ENST00000567479	ELL2	O00472	640 aa	Predicted RBP	12.18	□□□□□ -0.46
KIFC3-231	ENST00000567479	HOXA10	P31260	410 aa	Predicted RBP	12.18	□□□□□ -0.46
KIFC3-231	ENST00000567479	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
KIFC3-231	ENST00000567479	NLRP10	Q86W26	655 aa		12.18	□□□□□ -0.46
KIFC3-231	ENST00000567479	CRAMP1	Q96RY5	1269 aa		12.18	□□□□□ -0.46
KIFC3-231	ENST00000567479	ABCC12	Q96J65	1359 aa		12.18	□□□□□ -0.46
KIFC3-231	ENST00000567479	FSTL1	Q12841	308 aa		12.17	□□□□□ -0.46
KIFC3-231	ENST00000567479	CC2D2B	Q6DHV5	1058 aa		12.17	□□□□□ -0.46
KIFC3-231	ENST00000567479	OLFM4	Q6UX06	510 aa		12.17	□□□□□ -0.46
KIFC3-231	ENST00000567479	SYNE4	Q8N205	404 aa		12.17	□□□□□ -0.46
KIFC3-231	ENST00000567479	CHMP4A	Q9BY43	222 aa		12.17	□□□□□ -0.46
KIFC3-231	ENST00000567479	TRMT112	Q9UI30	125 aa	Known RBP	12.17	□□□□□ -0.46
KIFC3-231	ENST00000567479	RNF123	Q5XPI4	1314 aa		12.16	□□□□□ -0.46
KIFC3-231	ENST00000567479	CCDC27	Q2M243	656 aa		12.16	□□□□□ -0.46
KIFC3-231	ENST00000567479	GRIPAP1	Q4V328	841 aa		12.16	□□□□□ -0.46
KIFC3-231	ENST00000567479	C8orf58	Q8NAV2	365 aa		12.16	□□□□□ -0.46
KIFC3-231	ENST00000567479	TMX4	Q9H1E5	349 aa	Predicted RBP	12.16	□□□□□ -0.46
KIFC3-231	ENST00000567479	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.16	□□□□□ -0.46
KIFC3-231	ENST00000567479	SLX4	Q8IY92	1834 aa		12.16	□□□□□ -0.46
KIFC3-231	ENST00000567479	COL11A2	P13942	1736 aa	Predicted RBP	12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	RIC1	Q4ADV7	1423 aa		12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	TCERG1	O14776	1098 aa	Known RBP	12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	DDN	O94850	711 aa	Predicted RBP	12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	APLP1	P51693	650 aa		12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	C3orf67	Q6ZVT6	689 aa		12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	RIC3	Q7Z5B4	369 aa		12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	WWC1	Q8IX03	1113 aa		12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	SMC1B	Q8NDV3	1235 aa		12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	PSMD1	Q99460	953 aa		12.15	□□□□□ -0.46
KIFC3-231	ENST00000567479	SBF1	O95248	1867 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	SH3TC1	Q8TE82	1336 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	NUP98	P52948	1817 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	POTEC	B2RU33	542 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	ATP5J2-PTCD1	G3V325	749 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	PPEF1	O14829	653 aa	Predicted RBP	12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	HCLS1	P14317	486 aa	Predicted RBP	12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	IARS	P41252	1262 aa	Known RBP	12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	GOLGA2	Q08379	1002 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	NCBP3	Q53F19	620 aa	Known RBP	12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	CCDC30	Q5VVM6	783 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	ZNF428	Q96B54	188 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	ISCA1	Q9BUE6	129 aa		12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	PHAX	Q9H814	394 aa	Known RBP	12.14	□□□□□ -0.47
KIFC3-231	ENST00000567479	BBOX1	O75936	387 aa		12.13	□□□□□ -0.47
KIFC3-231	ENST00000567479	TRIM28	Q13263	835 aa	Known RBP	12.13	□□□□□ -0.47
KIFC3-231	ENST00000567479	DDX46	Q7L014	1031 aa	Known RBP	12.13	□□□□□ -0.47
KIFC3-231	ENST00000567479	JDP2	Q8WYK2	163 aa		12.13	□□□□□ -0.47
KIFC3-231	ENST00000567479	TSPYL6	Q8N831	410 aa		12.12	□□□□□ -0.47
KIFC3-231	ENST00000567479	TSR2	Q969E8	191 aa	Known RBP	12.12	□□□□□ -0.47
KIFC3-231	ENST00000567479	FAM89A	Q96GI7	184 aa		12.12	□□□□□ -0.47
KIFC3-231	ENST00000567479	SALL2	Q9Y467	1007 aa	Predicted RBP	12.12	□□□□□ -0.47
KIFC3-231	ENST00000567479	ATP6V0A2	Q9Y487	856 aa		12.12	□□□□□ -0.47
KIFC3-231	ENST00000567479	FER1L6	Q2WGJ9	1857 aa		12.11	□□□□□ -0.47
KIFC3-231	ENST00000567479	IQCA1L	A6NCM1	817 aa		12.11	□□□□□ -0.47
KIFC3-231	ENST00000567479	FZD9	O00144	591 aa		12.11	□□□□□ -0.47
KIFC3-231	ENST00000567479	DDX58	O95786	925 aa	Known RBP	12.11	□□□□□ -0.47
KIFC3-231	ENST00000567479	SP8	Q8IXZ3	490 aa		12.11	□□□□□ -0.47
KIFC3-231	ENST00000567479	ABCC4	O15439	1325 aa		12.11	□□□□□ -0.47
KIFC3-231	ENST00000567479	IL16	Q14005	1332 aa		12.11	□□□□□ -0.47
KIFC3-231	ENST00000567479	IRS4	O14654	1257 aa	Predicted RBP	12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	EIF6	P56537	245 aa	Known RBP	12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	TWISTNB	Q3B726	338 aa	Predicted RBP	12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	RTL5	Q5HYW3	569 aa	Predicted RBP	12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	WDR63	Q8IWG1	891 aa		12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	FAM9B	Q8IZU0	186 aa		12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	LARGE2	Q8N3Y3	721 aa		12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	MYD88	Q99836	296 aa		12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	STK31	Q9BXU1	1019 aa		12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	VPS33B	Q9H267	617 aa		12.1	□□□□□ -0.47
KIFC3-231	ENST00000567479	HSP90B1	P14625	803 aa	Known RBP	12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	GRAP	Q13588	217 aa		12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	SF3B3	Q15393	1217 aa	Known RBP	12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	MPND	Q8N594	471 aa		12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	DNAJC5G	Q8N7S2	189 aa		12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	CCDC191	Q8NCU4	936 aa		12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	SUPT20H	Q8NEM7	779 aa		12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	GRAPL	Q8TC17	118 aa	Predicted RBP	12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	ZNF541	Q9H0D2	1346 aa		12.09	□□□□□ -0.47
KIFC3-231	ENST00000567479	ARFGEF2	Q9Y6D5	1785 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	SLC4A2	P04920	1241 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	DPP8	Q6V1X1	898 aa	Predicted RBP	12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	TMC4	Q7Z404	712 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	SLC51A	Q86UW1	340 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	GPC2	Q8N158	579 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	METTL22	Q9BUU2	404 aa	Predicted RBP	12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	HACL1	Q9UJ83	578 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	MAP3K2	Q9Y2U5	619 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	SNED1	Q8TER0	1413 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	CCDC88A	Q3V6T2	1871 aa		12.08	□□□□□ -0.48
KIFC3-231	ENST00000567479	PPIP5K2	O43314	1243 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms