RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 ZPR1O75312 459 aa20.67■□□□□ 0.9
THUMPD1-203ENST00000565248 CCT4P50991 539 aaKnown RBP20.67■□□□□ 0.9
THUMPD1-203ENST00000565248 DDR1Q08345 913 aa20.67■□□□□ 0.9
THUMPD1-203ENST00000565248 VEGFAP15692 232 aaPredicted RBP20.66■□□□□ 0.9
THUMPD1-203ENST00000565248 PRELPP51888 382 aa20.66■□□□□ 0.9
THUMPD1-203ENST00000565248 DNAJC10Q8IXB1 793 aa20.66■□□□□ 0.9
THUMPD1-203ENST00000565248 CCDC136Q96JN2 1154 aa20.66■□□□□ 0.9
THUMPD1-203ENST00000565248 PHAXQ9H814 394 aaKnown RBP20.66■□□□□ 0.9
THUMPD1-203ENST00000565248 ANXA1P04083 346 aa20.65■□□□□ 0.9
THUMPD1-203ENST00000565248 MYL6BP14649 208 aa20.65■□□□□ 0.9
THUMPD1-203ENST00000565248 PDIA6Q15084 440 aa20.65■□□□□ 0.9
THUMPD1-203ENST00000565248 INTS3Q68E01 1043 aaKnown RBP20.65■□□□□ 0.9
THUMPD1-203ENST00000565248 POLRMTO00411 1230 aaKnown RBP20.64■□□□□ 0.89
THUMPD1-203ENST00000565248 TM4SF1P30408 202 aa20.64■□□□□ 0.89
THUMPD1-203ENST00000565248 PROSER3Q2NL68 480 aa20.64■□□□□ 0.89
THUMPD1-203ENST00000565248 SLC4A10Q6U841 1118 aa20.64■□□□□ 0.89
THUMPD1-203ENST00000565248 LMNB1P20700 586 aa20.63■□□□□ 0.89
THUMPD1-203ENST00000565248 GLTPD2A6NH11 291 aa20.62■□□□□ 0.89
THUMPD1-203ENST00000565248 KSR2Q6VAB6 950 aa20.62■□□□□ 0.89
THUMPD1-203ENST00000565248 NPM2Q86SE8 214 aaKnown RBP20.62■□□□□ 0.89
THUMPD1-203ENST00000565248 DNAAF4Q8WXU2 420 aa20.62■□□□□ 0.89
THUMPD1-203ENST00000565248 TJP1Q07157 1748 aa20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 PI4KAP2A4QPH2 592 aa20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 F6X3S4 739 aa20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 A1BGP04217 495 aa20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 AIMP1Q12904 312 aaKnown RBP20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 USPL1Q5W0Q7 1092 aa20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 PI4KAP1Q8N8J0 262 aa20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 XAGE3Q8WTP9 111 aa20.61■□□□□ 0.89
THUMPD1-203ENST00000565248 CYP19A1P11511 503 aaPredicted RBP20.6■□□□□ 0.89
THUMPD1-203ENST00000565248 RASSF7Q02833 373 aa20.6■□□□□ 0.89
THUMPD1-203ENST00000565248 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
THUMPD1-203ENST00000565248 COPS6Q7L5N1 327 aa20.6■□□□□ 0.89
THUMPD1-203ENST00000565248 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
THUMPD1-203ENST00000565248 HSPA1AP0DMV8 641 aaKnown RBP20.59■□□□□ 0.89
THUMPD1-203ENST00000565248 HSPA1BP0DMV9 641 aaKnown RBP20.59■□□□□ 0.89
THUMPD1-203ENST00000565248 TTLL6Q8N841 843 aa20.59■□□□□ 0.89
THUMPD1-203ENST00000565248 NBPF26B4DH59 902 aa20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 NPM3O75607 178 aaKnown RBP20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 B4GALNT3Q6L9W6 998 aa20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 DPY19L2Q6NUT2 758 aa20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 NBPF10Q6P3W6 841 aaKnown RBP20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 NBPF15Q8N660 670 aa20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 SRCIN1Q9C0H9 1055 aa20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 MAP3K2Q9Y2U5 619 aa20.58■□□□□ 0.89
THUMPD1-203ENST00000565248 PIP4K2AP48426 406 aaPredicted RBP20.57■□□□□ 0.88
THUMPD1-203ENST00000565248 CCDC88AQ3V6T2 1871 aa20.57■□□□□ 0.88
THUMPD1-203ENST00000565248 ANKRD13DQ6ZTN6 518 aa20.57■□□□□ 0.88
THUMPD1-203ENST00000565248 LRP10Q7Z4F1 713 aa20.57■□□□□ 0.88
THUMPD1-203ENST00000565248 AFDNP55196 1824 aaKnown RBP20.57■□□□□ 0.88
THUMPD1-203ENST00000565248 ZBTB7BO15156 539 aaPredicted RBP20.56■□□□□ 0.88
THUMPD1-203ENST00000565248 KIF6Q6ZMV9 814 aa20.56■□□□□ 0.88
THUMPD1-203ENST00000565248 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
THUMPD1-203ENST00000565248 ZBTB40Q9NUA8 1239 aa20.56■□□□□ 0.88
THUMPD1-203ENST00000565248 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
THUMPD1-203ENST00000565248 DLEC1Q9Y238 1755 aa20.55■□□□□ 0.88
THUMPD1-203ENST00000565248 H0YIN7 160 aa20.55■□□□□ 0.88
THUMPD1-203ENST00000565248 ALDH1L1O75891 902 aa20.55■□□□□ 0.88
THUMPD1-203ENST00000565248 GNAI3P08754 354 aa20.55■□□□□ 0.88
THUMPD1-203ENST00000565248 IL6STP40189 918 aaPredicted RBP20.55■□□□□ 0.88
THUMPD1-203ENST00000565248 NFIXQ14938 502 aa20.55■□□□□ 0.88
THUMPD1-203ENST00000565248 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
THUMPD1-203ENST00000565248 TIAM2Q8IVF5 1701 aa20.54■□□□□ 0.88
THUMPD1-203ENST00000565248 SERPINB2P05120 415 aa20.54■□□□□ 0.88
THUMPD1-203ENST00000565248 C2CD5Q86YS7 1000 aa20.54■□□□□ 0.88
THUMPD1-203ENST00000565248 HDAC5Q9UQL6 1122 aa20.54■□□□□ 0.88
THUMPD1-203ENST00000565248 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
THUMPD1-203ENST00000565248 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
THUMPD1-203ENST00000565248 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
THUMPD1-203ENST00000565248 ZBTB1Q9Y2K1 713 aa20.53■□□□□ 0.88
THUMPD1-203ENST00000565248 COL15A1P39059 1388 aa20.53■□□□□ 0.88
THUMPD1-203ENST00000565248 NRXN2Q9P2S2 1712 aa20.53■□□□□ 0.88
THUMPD1-203ENST00000565248 RWDD1Q9H446 243 aaPredicted RBP20.52■□□□□ 0.88
THUMPD1-203ENST00000565248 PDZRN3Q9UPQ7 1066 aa20.51■□□□□ 0.87
THUMPD1-203ENST00000565248 IBTKQ9P2D0 1353 aaPredicted RBP20.5■□□□□ 0.87
THUMPD1-203ENST00000565248 A0A087WZG4 1122 aa20.5■□□□□ 0.87
THUMPD1-203ENST00000565248 TTLL7Q6ZT98 887 aa20.5■□□□□ 0.87
THUMPD1-203ENST00000565248 MYD88Q99836 296 aa20.5■□□□□ 0.87
THUMPD1-203ENST00000565248 GNAI2P04899 355 aa20.49■□□□□ 0.87
THUMPD1-203ENST00000565248 UBTFL1P0CB47 393 aaPredicted RBP20.49■□□□□ 0.87
THUMPD1-203ENST00000565248 CENPQQ7L2Z9 268 aaPredicted RBP20.49■□□□□ 0.87
THUMPD1-203ENST00000565248 MEIS3Q99687 375 aa20.49■□□□□ 0.87
THUMPD1-203ENST00000565248 NFKBIEO00221 500 aa20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 EIF5P55010 431 aaKnown RBP20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 ERFEQ4G0M1 354 aa20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 HSP90AB3PQ58FF7 597 aa20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 ZNF622Q969S3 477 aaKnown RBP eCLIP20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 ZBTB3Q9H5J0 574 aa20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 CREBZFQ9NS37 354 aa20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 C9orf78Q9NZ63 289 aaPredicted RBP20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 PCDHB15Q9Y5E8 787 aa20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 MAP3K15Q6ZN16 1313 aa20.48■□□□□ 0.87
THUMPD1-203ENST00000565248 PDE6BP35913 854 aa20.47■□□□□ 0.87
THUMPD1-203ENST00000565248 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
THUMPD1-203ENST00000565248 POTECB2RU33 542 aa20.46■□□□□ 0.87
THUMPD1-203ENST00000565248 ERVV-1B6SEH8 477 aa20.46■□□□□ 0.87
THUMPD1-203ENST00000565248 BICDL1Q6ZP65 573 aa20.46■□□□□ 0.87
THUMPD1-203ENST00000565248 RPAP2Q8IXW5 612 aaPredicted RBP20.46■□□□□ 0.87
THUMPD1-203ENST00000565248 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms