RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 MYL1P05976 194 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 HARSP12081 509 aaKnown RBP5.79□□□□□ -1.48
TCF4-215ENST00000562638 STIP1P31948 543 aaKnown RBP5.79□□□□□ -1.48
TCF4-215ENST00000562638 ACTN2P35609 894 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 PLA2G4AP47712 749 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 ZSCAN23Q3MJ62 389 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 PREPLQ4J6C6 727 aaPredicted RBP5.79□□□□□ -1.48
TCF4-215ENST00000562638 ZFYVE27Q5T4F4 411 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 SOGA3Q5TF21 947 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 SFMBT2Q5VUG0 894 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 LRRC31Q6UY01 552 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 SPATA21Q7Z572 469 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 SKAP1Q86WV1 359 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 ERC1Q8IUD2 1116 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 MYOCDQ8IZQ8 938 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 RNF214Q8ND24 703 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 BHMTQ93088 406 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 RNF166Q96A37 237 aaPredicted RBP5.79□□□□□ -1.48
TCF4-215ENST00000562638 MS4A4AQ96JQ5 239 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 UNC45AQ9H3U1 944 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 SLC24A3Q9HC58 644 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 ST7Q9NRC1 585 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 FHOD1Q9Y613 1164 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 PLEKHH1Q9ULM0 1364 aa5.79□□□□□ -1.48
TCF4-215ENST00000562638 MAPK8IP3Q9UPT6 1336 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 POLA1P09884 1462 aaPredicted RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 SHROOM2Q13796 1616 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 KIF2AO00139 706 aaPredicted RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 RIMBP2O15034 1052 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 U2SURPO15042 1029 aaKnown RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 CBFA2T2O43439 604 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 AP1G2O75843 785 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 RTN3O95197 1032 aaPredicted RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 KIF4AO95239 1232 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 GPTP24298 496 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 RDXP35241 583 aaKnown RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 IQCB1Q15051 598 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 ZRSR1Q15695 479 aaKnown RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 ZNF394Q53GI3 561 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 WLSQ5T9L3 541 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 TMCO4Q5TGY1 634 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 ISM2Q6H9L7 571 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 LRSAM1Q6UWE0 723 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 CDC37L1Q7L3B6 337 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 FILIP1Q7Z7B0 1213 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 TADA2BQ86TJ2 420 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 REXO1L1PQ8IX06 675 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 MIGA1Q8NAN2 632 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 GIMAP7Q8NHV1 300 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 NEK9Q8TD19 979 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 SPATA32Q96LK8 384 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 SRRTQ9BXP5 876 aaKnown RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 HOXC10Q9NYD6 342 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 SPATA7Q9P0W8 599 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 PUF60Q9UHX1 559 aaKnown RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 BRD4O60885 1362 aaPredicted RBP5.78□□□□□ -1.48
TCF4-215ENST00000562638 RAB3GAP2Q9H2M9 1393 aa5.78□□□□□ -1.48
TCF4-215ENST00000562638 LRRC10BA6NIK2 292 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 ECM2O94769 699 aaPredicted RBP5.77□□□□□ -1.49
TCF4-215ENST00000562638 PYGLP06737 847 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 HOXD10P28358 340 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 TPP2P29144 1249 aaPredicted RBP5.77□□□□□ -1.49
TCF4-215ENST00000562638 HNRNPH1P31943 449 aaKnown RBP5.77□□□□□ -1.49
TCF4-215ENST00000562638 GJA8P48165 433 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 APLP1P51693 650 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 ZBED6P86452 979 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 SLC7A5Q01650 507 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 PTK7Q13308 1070 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 RCSD1Q6JBY9 416 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 FBXO38Q6PIJ6 1188 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 GBP6Q6ZN66 633 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 C3orf20Q8ND61 904 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 GAS2L2Q8NHY3 880 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 EZH1Q92800 747 aaPredicted RBP5.77□□□□□ -1.49
TCF4-215ENST00000562638 SMARCE1Q969G3 411 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 CRBNQ96SW2 442 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 TRAIPQ9BWF2 469 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 FAM107BQ9H098 131 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 ZSWIM6Q9HCJ5 1215 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 CLIP2Q9UDT6 1046 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 MKRN1Q9UHC7 482 aaKnown RBP5.77□□□□□ -1.49
TCF4-215ENST00000562638 PNMA2Q9UL42 364 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 PDZRN3Q9UPQ7 1066 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 ATP8A1Q9Y2Q0 1164 aa5.77□□□□□ -1.49
TCF4-215ENST00000562638 EIF3AQ14152 1382 aaKnown RBP5.77□□□□□ -1.49
TCF4-215ENST00000562638 SCAF11Q99590 1463 aaKnown RBP5.77□□□□□ -1.49
TCF4-215ENST00000562638 SHTN1A0MZ66 631 aa5.76□□□□□ -1.49
TCF4-215ENST00000562638 SMARCA5O60264 1052 aaPredicted RBP5.76□□□□□ -1.49
TCF4-215ENST00000562638 OPA1O60313 960 aa5.76□□□□□ -1.49
TCF4-215ENST00000562638 NAT2P11245 290 aa5.76□□□□□ -1.49
TCF4-215ENST00000562638 PRIM1P49642 420 aaKnown RBP5.76□□□□□ -1.49
TCF4-215ENST00000562638 SESN3P58005 492 aa5.76□□□□□ -1.49
TCF4-215ENST00000562638 PPP4CP60510 307 aa5.76□□□□□ -1.49
TCF4-215ENST00000562638 PRPF4BQ13523 1007 aaKnown RBP5.76□□□□□ -1.49
TCF4-215ENST00000562638 POSTNQ15063 836 aa5.76□□□□□ -1.49
TCF4-215ENST00000562638 CLPPQ16740 277 aaPredicted RBP5.76□□□□□ -1.49
TCF4-215ENST00000562638 ARSIQ5FYB1 569 aa5.76□□□□□ -1.49
TCF4-215ENST00000562638 RC3H1Q5TC82 1133 aaKnown RBP5.76□□□□□ -1.49
TCF4-215ENST00000562638 CAVIN1Q6NZI2 390 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms