RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	TRIM28	Q13263	835 aa	Known RBP	32.96	■■■□□ 2.87
TCF12-222	ENST00000561152	ARFGEF1	Q9Y6D6	1849 aa		32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	COL11A2	P13942	1736 aa	Predicted RBP	32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	PI4KAP2	A4QPH2	592 aa		32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	G2E3	Q7L622	706 aa		32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	PI4KAP1	Q8N8J0	262 aa		32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	METTL22	Q9BUU2	404 aa	Predicted RBP	32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	TRMT112	Q9UI30	125 aa	Known RBP	32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	MAP3K2	Q9Y2U5	619 aa		32.95	■■■□□ 2.87
TCF12-222	ENST00000561152	ABCC12	Q96J65	1359 aa		32.95	■■■□□ 2.86
TCF12-222	ENST00000561152	KLRG2	A4D1S0	409 aa	Predicted RBP	32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	ATP5J2-PTCD1	G3V325	749 aa		32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	CT47B1	P0C2W7	299 aa	Predicted RBP	32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	SRGN	P10124	158 aa		32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	FKBP5	Q13451	457 aa	Predicted RBP	32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	TTLL6	Q8N841	843 aa		32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	MASTL	Q96GX5	879 aa		32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	MYD88	Q99836	296 aa		32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	GOLGB1	Q14789	3259 aa	Known RBP	32.94	■■■□□ 2.86
TCF12-222	ENST00000561152	NEXN	Q0ZGT2	675 aa		32.93	■■■□□ 2.86
TCF12-222	ENST00000561152	STYK1	Q6J9G0	422 aa		32.93	■■■□□ 2.86
TCF12-222	ENST00000561152	SH3TC1	Q8TE82	1336 aa		32.93	■■■□□ 2.86
TCF12-222	ENST00000561152	CNKSR1	Q969H4	720 aa		32.92	■■■□□ 2.86
TCF12-222	ENST00000561152	ADCY9	O60503	1353 aa		32.92	■■■□□ 2.86
TCF12-222	ENST00000561152	CHD4	Q14839	1912 aa		32.92	■■■□□ 2.86
TCF12-222	ENST00000561152	NPR1	P16066	1061 aa		32.91	■■■□□ 2.86
TCF12-222	ENST00000561152	SLC10A5	Q5PT55	438 aa		32.9	■■■□□ 2.86
TCF12-222	ENST00000561152	CCDC191	Q8NCU4	936 aa		32.9	■■■□□ 2.86
TCF12-222	ENST00000561152	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.89	■■■□□ 2.86
TCF12-222	ENST00000561152	ZBED9	Q6R2W3	1325 aa		32.89	■■■□□ 2.86
TCF12-222	ENST00000561152	NLRP3	Q96P20	1036 aa		32.89	■■■□□ 2.86
TCF12-222	ENST00000561152	CRY2	Q49AN0	593 aa		32.87	■■■□□ 2.85
TCF12-222	ENST00000561152	CWC25	Q9NXE8	425 aa	Predicted RBP	32.87	■■■□□ 2.85
TCF12-222	ENST00000561152	UTRN	P46939	3433 aa		32.86	■■■□□ 2.85
TCF12-222	ENST00000561152	ALDH1L2	Q3SY69	923 aa		32.86	■■■□□ 2.85
TCF12-222	ENST00000561152	DNAAF4	Q8WXU2	420 aa		32.86	■■■□□ 2.85
TCF12-222	ENST00000561152	RPGR	Q92834	1020 aa	Known RBP	32.85	■■■□□ 2.85
TCF12-222	ENST00000561152	HSP90B1	P14625	803 aa	Known RBP	32.84	■■■□□ 2.85
TCF12-222	ENST00000561152	ALDH1B1	P30837	517 aa		32.84	■■■□□ 2.85
TCF12-222	ENST00000561152	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.84	■■■□□ 2.85
TCF12-222	ENST00000561152	ARHGAP27	Q6ZUM4	889 aa		32.83	■■■□□ 2.85
TCF12-222	ENST00000561152	MRPL50	Q8N5N7	158 aa	Known RBP	32.83	■■■□□ 2.85
TCF12-222	ENST00000561152	FAM89A	Q96GI7	184 aa		32.83	■■■□□ 2.85
TCF12-222	ENST00000561152	CACNA1S	Q13698	1873 aa		32.82	■■■□□ 2.85
TCF12-222	ENST00000561152	SSH1	Q8WYL5	1049 aa		32.82	■■■□□ 2.84
TCF12-222	ENST00000561152	HCLS1	P14317	486 aa	Predicted RBP	32.81	■■■□□ 2.84
TCF12-222	ENST00000561152	PRPF40B	Q6NWY9	871 aa	Known RBP	32.81	■■■□□ 2.84
TCF12-222	ENST00000561152	RBM17	Q96I25	401 aa	Known RBP	32.81	■■■□□ 2.84
TCF12-222	ENST00000561152	PCCA	P05165	728 aa	Predicted RBP	32.8	■■■□□ 2.84
TCF12-222	ENST00000561152	IGKV5-2	P06315	115 aa		32.8	■■■□□ 2.84
TCF12-222	ENST00000561152	SYNE4	Q8N205	404 aa		32.8	■■■□□ 2.84
TCF12-222	ENST00000561152	NEURL1B	A8MQ27	555 aa		32.79	■■■□□ 2.84
TCF12-222	ENST00000561152	YY1	P25490	414 aa		32.79	■■■□□ 2.84
TCF12-222	ENST00000561152	HOXA10	P31260	410 aa	Predicted RBP	32.79	■■■□□ 2.84
TCF12-222	ENST00000561152	SOGA3	Q5TF21	947 aa		32.79	■■■□□ 2.84
TCF12-222	ENST00000561152	LINS1	Q8NG48	757 aa		32.79	■■■□□ 2.84
TCF12-222	ENST00000561152	SMC4	Q9NTJ3	1288 aa		32.79	■■■□□ 2.84
TCF12-222	ENST00000561152	DDX60	Q8IY21	1712 aa	Known RBP	32.79	■■■□□ 2.84
TCF12-222	ENST00000561152	PTPRC	P08575	1304 aa		32.78	■■■□□ 2.84
TCF12-222	ENST00000561152	LAMB2	P55268	1798 aa		32.78	■■■□□ 2.84
TCF12-222	ENST00000561152	RTL5	Q5HYW3	569 aa	Predicted RBP	32.78	■■■□□ 2.84
TCF12-222	ENST00000561152	SLX4	Q8IY92	1834 aa		32.78	■■■□□ 2.84
TCF12-222	ENST00000561152	IRS4	O14654	1257 aa	Predicted RBP	32.77	■■■□□ 2.84
TCF12-222	ENST00000561152	CWF19L2	Q2TBE0	894 aa	Known RBP	32.77	■■■□□ 2.84
TCF12-222	ENST00000561152	CRAMP1	Q96RY5	1269 aa		32.77	■■■□□ 2.84
TCF12-222	ENST00000561152	C3orf67	Q6ZVT6	689 aa		32.76	■■■□□ 2.83
TCF12-222	ENST00000561152	BCL2L13	Q9BXK5	485 aa		32.76	■■■□□ 2.83
TCF12-222	ENST00000561152		F6X3S4	739 aa		32.75	■■■□□ 2.83
TCF12-222	ENST00000561152	C21orf2	O43822	256 aa		32.75	■■■□□ 2.83
TCF12-222	ENST00000561152	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.74	■■■□□ 2.83
TCF12-222	ENST00000561152	CDHR2	Q9BYE9	1310 aa		32.74	■■■□□ 2.83
TCF12-222	ENST00000561152	GCKR	Q14397	625 aa		32.73	■■■□□ 2.83
TCF12-222	ENST00000561152	DDX46	Q7L014	1031 aa	Known RBP	32.72	■■■□□ 2.83
TCF12-222	ENST00000561152	RARS	P54136	660 aa	Known RBP	32.71	■■■□□ 2.83
TCF12-222	ENST00000561152	SF3B3	Q15393	1217 aa	Known RBP	32.71	■■■□□ 2.83
TCF12-222	ENST00000561152	BEND3	Q5T5X7	828 aa		32.71	■■■□□ 2.83
TCF12-222	ENST00000561152	SLC4A10	Q6U841	1118 aa		32.71	■■■□□ 2.83
TCF12-222	ENST00000561152	PDE8A	O60658	829 aa		32.7	■■■□□ 2.83
TCF12-222	ENST00000561152	BRPF1	P55201	1214 aa	Predicted RBP	32.7	■■■□□ 2.83
TCF12-222	ENST00000561152	CCDC93	Q567U6	631 aa		32.69	■■■□□ 2.82
TCF12-222	ENST00000561152	C7orf43	Q8WVR3	580 aa		32.69	■■■□□ 2.82
TCF12-222	ENST00000561152		H7C1W4	665 aa		32.68	■■■□□ 2.82
TCF12-222	ENST00000561152	CC2D2B	Q6DHV5	1058 aa		32.68	■■■□□ 2.82
TCF12-222	ENST00000561152	SRCIN1	Q9C0H9	1055 aa		32.68	■■■□□ 2.82
TCF12-222	ENST00000561152	TMX4	Q9H1E5	349 aa	Predicted RBP	32.68	■■■□□ 2.82
TCF12-222	ENST00000561152	ABCC4	O15439	1325 aa		32.68	■■■□□ 2.82
TCF12-222	ENST00000561152	FER1L6	Q2WGJ9	1857 aa		32.67	■■■□□ 2.82
TCF12-222	ENST00000561152	PPEF1	O14829	653 aa	Predicted RBP	32.67	■■■□□ 2.82
TCF12-222	ENST00000561152	ALDH1L1	O75891	902 aa		32.67	■■■□□ 2.82
TCF12-222	ENST00000561152	UBE3B	Q7Z3V4	1068 aa		32.67	■■■□□ 2.82
TCF12-222	ENST00000561152	JARID2	Q92833	1246 aa	Predicted RBP	32.67	■■■□□ 2.82
TCF12-222	ENST00000561152	KIF16B	Q96L93	1317 aa		32.67	■■■□□ 2.82
TCF12-222	ENST00000561152	BBOX1	O75936	387 aa		32.66	■■■□□ 2.82
TCF12-222	ENST00000561152	GRAP	Q13588	217 aa		32.65	■■■□□ 2.82
TCF12-222	ENST00000561152	CCDC152	Q4G0S7	254 aa		32.65	■■■□□ 2.82
TCF12-222	ENST00000561152	GRIPAP1	Q4V328	841 aa		32.65	■■■□□ 2.82
TCF12-222	ENST00000561152	RTKN2	Q8IZC4	609 aa		32.65	■■■□□ 2.82
TCF12-222	ENST00000561152	GRAPL	Q8TC17	118 aa	Predicted RBP	32.65	■■■□□ 2.82
TCF12-222	ENST00000561152	SBF1	O95248	1867 aa		32.64	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms