RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 MAFBQ9Y5Q3 323 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-218ENST00000560236 TBC1D8BQ0IIM8 1120 aa7.71□□□□□ -1.18
LRRC28-218ENST00000560236 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-218ENST00000560236 CLUAP1Q96AJ1 413 aa7.71□□□□□ -1.18
LRRC28-218ENST00000560236 LILRB5O75023 590 aa7.7□□□□□ -1.18
LRRC28-218ENST00000560236 NID1P14543 1247 aa7.7□□□□□ -1.18
LRRC28-218ENST00000560236 ITGB7P26010 798 aa7.7□□□□□ -1.18
LRRC28-218ENST00000560236 LARP1Q6PKG0 1096 aaKnown RBP7.7□□□□□ -1.18
LRRC28-218ENST00000560236 C20orf204Q6ZNR8 217 aa7.7□□□□□ -1.18
LRRC28-218ENST00000560236 NACC1Q96RE7 527 aa7.7□□□□□ -1.18
LRRC28-218ENST00000560236 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
LRRC28-218ENST00000560236 UBE2OQ9C0C9 1292 aaKnown RBP7.7□□□□□ -1.18
LRRC28-218ENST00000560236 IGFLR1Q9H665 355 aa7.7□□□□□ -1.18
LRRC28-218ENST00000560236 TRAPPC3LQ5T215 181 aa7.69□□□□□ -1.18
LRRC28-218ENST00000560236 FNBP4Q8N3X1 1017 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-218ENST00000560236 GRIK4Q16099 956 aa7.68□□□□□ -1.18
LRRC28-218ENST00000560236 RTN1Q16799 776 aa7.68□□□□□ -1.18
LRRC28-218ENST00000560236 PNMA5Q96PV4 448 aa7.68□□□□□ -1.18
LRRC28-218ENST00000560236 EFCC1Q9HA90 598 aa7.68□□□□□ -1.18
LRRC28-218ENST00000560236 TPSG1Q9NRR2 321 aa7.68□□□□□ -1.18
LRRC28-218ENST00000560236 SLC6A14Q9UN76 642 aa7.68□□□□□ -1.18
LRRC28-218ENST00000560236 RSPO4Q2I0M5 234 aaPredicted RBP7.67□□□□□ -1.18
LRRC28-218ENST00000560236 IER5Q5VY09 327 aa7.67□□□□□ -1.18
LRRC28-218ENST00000560236 LGR5O75473 907 aa7.66□□□□□ -1.18
LRRC28-218ENST00000560236 DPYDQ12882 1025 aa7.66□□□□□ -1.18
LRRC28-218ENST00000560236 PTK7Q13308 1070 aa7.66□□□□□ -1.18
LRRC28-218ENST00000560236 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-218ENST00000560236 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
LRRC28-218ENST00000560236 CALR3Q96L12 384 aaKnown RBP7.66□□□□□ -1.18
LRRC28-218ENST00000560236 PPP1R12CQ9BZL4 782 aa7.66□□□□□ -1.18
LRRC28-218ENST00000560236 GSX2Q9BZM3 304 aa7.66□□□□□ -1.18
LRRC28-218ENST00000560236 JPH1Q9HDC5 661 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-218ENST00000560236 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.66□□□□□ -1.18
LRRC28-218ENST00000560236 TGFBR3LH3BV60 316 aa7.65□□□□□ -1.18
LRRC28-218ENST00000560236 CCINQ13939 588 aa7.65□□□□□ -1.18
LRRC28-218ENST00000560236 NKAPLQ5M9Q1 402 aa7.65□□□□□ -1.18
LRRC28-218ENST00000560236 NUDT8Q8WV74 236 aa7.65□□□□□ -1.18
LRRC28-218ENST00000560236 DNAJB12Q9NXW2 375 aaKnown RBP7.65□□□□□ -1.18
LRRC28-218ENST00000560236 C9orf172C9J069 976 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 ELNP15502 786 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 EPB42P16452 691 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 NFKB1P19838 968 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 IGFBP4P22692 258 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 RAC1P63000 192 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-218ENST00000560236 ANKMY2Q8IV38 441 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 BCS1LQ9Y276 419 aa7.64□□□□□ -1.19
LRRC28-218ENST00000560236 A0A0A0MRY4 1105 aa7.63□□□□□ -1.19
LRRC28-218ENST00000560236 PSAPL1Q6NUJ1 521 aa7.63□□□□□ -1.19
LRRC28-218ENST00000560236 VRTNQ9H8Y1 702 aa7.63□□□□□ -1.19
LRRC28-218ENST00000560236 DMGDHQ9UI17 866 aaKnown RBP7.63□□□□□ -1.19
LRRC28-218ENST00000560236 FAM196BA6NMK8 535 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L15C9J2P7 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L10C9JJH3 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L13C9JLJ4 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L12C9JPN9 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L11C9JVI0 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L21D6R901 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L18D6R9N7 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L22D6RA61 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L17D6RBQ6 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L19D6RCP7 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L20D6RJB6 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 DYRK3O43781 588 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 RGS9O75916 674 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-218ENST00000560236 AFF1P51825 1210 aaKnown RBP7.62□□□□□ -1.19
LRRC28-218ENST00000560236 USP17L24Q0WX57 530 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 KLK14Q9P0G3 267 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 NAGPAQ9UK23 515 aa7.62□□□□□ -1.19
LRRC28-218ENST00000560236 SELPP16109 830 aa7.61□□□□□ -1.19
LRRC28-218ENST00000560236 LMOD1P29536 600 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-218ENST00000560236 INPP5BP32019 993 aa7.61□□□□□ -1.19
LRRC28-218ENST00000560236 ADGRE1Q14246 886 aa7.61□□□□□ -1.19
LRRC28-218ENST00000560236 MBTPS1Q14703 1052 aa7.61□□□□□ -1.19
LRRC28-218ENST00000560236 FAM35AQ86V20 835 aa7.61□□□□□ -1.19
LRRC28-218ENST00000560236 IDH3AP50213 366 aa7.6□□□□□ -1.19
LRRC28-218ENST00000560236 NRG1Q02297 640 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-218ENST00000560236 DGKZQ13574 1117 aa7.6□□□□□ -1.19
LRRC28-218ENST00000560236 PCSK7Q16549 785 aa7.6□□□□□ -1.19
LRRC28-218ENST00000560236 TMEM132AQ24JP5 1023 aa7.6□□□□□ -1.19
LRRC28-218ENST00000560236 VTI1AQ96AJ9 217 aa7.6□□□□□ -1.19
LRRC28-218ENST00000560236 LENG1Q96BZ8 264 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-218ENST00000560236 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
LRRC28-218ENST00000560236 A6NJR5 290 aa7.59□□□□□ -1.19
LRRC28-218ENST00000560236 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
LRRC28-218ENST00000560236 CPB1P15086 417 aa7.59□□□□□ -1.19
LRRC28-218ENST00000560236 GRNP28799 593 aaKnown RBP7.59□□□□□ -1.19
LRRC28-218ENST00000560236 SHISA2Q6UWI4 295 aa7.59□□□□□ -1.19
LRRC28-218ENST00000560236 KRT25Q7Z3Z0 450 aa7.59□□□□□ -1.19
LRRC28-218ENST00000560236 TXNRD3Q86VQ6 643 aa7.59□□□□□ -1.19
LRRC28-218ENST00000560236 DMRTC2Q8IXT2 367 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-218ENST00000560236 FMR1NBQ8N0W7 255 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-218ENST00000560236 ARSDP51689 593 aa7.58□□□□□ -1.2
LRRC28-218ENST00000560236 PRSS36Q5K4E3 855 aa7.58□□□□□ -1.2
LRRC28-218ENST00000560236 ARXQ96QS3 562 aa7.58□□□□□ -1.2
LRRC28-218ENST00000560236 QTRT2Q9H974 415 aaKnown RBP7.58□□□□□ -1.2
LRRC28-218ENST00000560236 USP21Q9UK80 565 aa7.58□□□□□ -1.2
LRRC28-218ENST00000560236 FOXO3O43524 673 aa7.57□□□□□ -1.2
LRRC28-218ENST00000560236 WEE1P30291 646 aa7.57□□□□□ -1.2
LRRC28-218ENST00000560236 FOXD4L6Q3SYB3 417 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms