RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SRGNP10124 158 aa17.76■□□□□ 0.43
TSPAN3-205ENST00000558745 PARP10Q53GL7 1025 aa17.76■□□□□ 0.43
TSPAN3-205ENST00000558745 ARHGAP27Q6ZUM4 889 aa17.76■□□□□ 0.43
TSPAN3-205ENST00000558745 PPP1R42Q7Z4L9 355 aa17.76■□□□□ 0.43
TSPAN3-205ENST00000558745 PI4KAP2A4QPH2 592 aa17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 TTLL6Q8N841 843 aa17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 PI4KAP1Q8N8J0 262 aa17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 MAP3K2Q9Y2U5 619 aa17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 BRCA1P38398 1863 aaKnown RBP17.75■□□□□ 0.43
TSPAN3-205ENST00000558745 HCLS1P14317 486 aaPredicted RBP17.74■□□□□ 0.43
TSPAN3-205ENST00000558745 KSR2Q6VAB6 950 aa17.74■□□□□ 0.43
TSPAN3-205ENST00000558745 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
TSPAN3-205ENST00000558745 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
TSPAN3-205ENST00000558745 KLRG2A4D1S0 409 aaPredicted RBP17.73■□□□□ 0.43
TSPAN3-205ENST00000558745 FLIIQ13045 1269 aa17.73■□□□□ 0.43
TSPAN3-205ENST00000558745 FAM89AQ96GI7 184 aa17.73■□□□□ 0.43
TSPAN3-205ENST00000558745 MASTLQ96GX5 879 aa17.73■□□□□ 0.43
TSPAN3-205ENST00000558745 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
TSPAN3-205ENST00000558745 COL11A2P13942 1736 aaPredicted RBP17.73■□□□□ 0.43
TSPAN3-205ENST00000558745 ADCY9O60503 1353 aa17.73■□□□□ 0.43
TSPAN3-205ENST00000558745 C21orf2O43822 256 aa17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 GPBP1L1Q9HC44 474 aaPredicted RBP17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 OLFM4Q6UX06 510 aa17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
TSPAN3-205ENST00000558745 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
TSPAN3-205ENST00000558745 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
TSPAN3-205ENST00000558745 F6X3S4 739 aa17.71■□□□□ 0.42
TSPAN3-205ENST00000558745 IGKV5-2P06315 115 aa17.71■□□□□ 0.42
TSPAN3-205ENST00000558745 NPR1P16066 1061 aa17.71■□□□□ 0.42
TSPAN3-205ENST00000558745 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.42
TSPAN3-205ENST00000558745 SLC51AQ86UW1 340 aa17.71■□□□□ 0.42
TSPAN3-205ENST00000558745 IBTKQ9P2D0 1353 aaPredicted RBP17.7■□□□□ 0.42
TSPAN3-205ENST00000558745 TRIM28Q13263 835 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-205ENST00000558745 CWF19L2Q2TBE0 894 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-205ENST00000558745 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-205ENST00000558745 CNKSR1Q969H4 720 aa17.7■□□□□ 0.42
TSPAN3-205ENST00000558745 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
TSPAN3-205ENST00000558745 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
TSPAN3-205ENST00000558745 SH3TC1Q8TE82 1336 aa17.69■□□□□ 0.42
TSPAN3-205ENST00000558745 SLX4Q8IY92 1834 aa17.69■□□□□ 0.42
TSPAN3-205ENST00000558745 DLEC1Q9Y238 1755 aa17.69■□□□□ 0.42
TSPAN3-205ENST00000558745 RASSF7Q02833 373 aa17.69■□□□□ 0.42
TSPAN3-205ENST00000558745 CRY2Q49AN0 593 aa17.69■□□□□ 0.42
TSPAN3-205ENST00000558745 MRPL50Q8N5N7 158 aaKnown RBP17.69■□□□□ 0.42
TSPAN3-205ENST00000558745 SSH1Q8WYL5 1049 aa17.69■□□□□ 0.42
TSPAN3-205ENST00000558745 PRELPP51888 382 aa17.68■□□□□ 0.42
TSPAN3-205ENST00000558745 CCDC191Q8NCU4 936 aa17.67■□□□□ 0.42
TSPAN3-205ENST00000558745 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
TSPAN3-205ENST00000558745 DNAAF4Q8WXU2 420 aa17.67■□□□□ 0.42
TSPAN3-205ENST00000558745 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-205ENST00000558745 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-205ENST00000558745 ARFGEF1Q9Y6D6 1849 aa17.67■□□□□ 0.42
TSPAN3-205ENST00000558745 CACNA1SQ13698 1873 aa17.66■□□□□ 0.42
TSPAN3-205ENST00000558745 IRS4O14654 1257 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-205ENST00000558745 HOXA10P31260 410 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-205ENST00000558745 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-205ENST00000558745 NEURL1BA8MQ27 555 aa17.65■□□□□ 0.42
TSPAN3-205ENST00000558745 NFKBIEO00221 500 aa17.65■□□□□ 0.42
TSPAN3-205ENST00000558745 ALDH1B1P30837 517 aa17.65■□□□□ 0.42
TSPAN3-205ENST00000558745 NEXNQ0ZGT2 675 aa17.65■□□□□ 0.42
TSPAN3-205ENST00000558745 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
TSPAN3-205ENST00000558745 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-205ENST00000558745 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
TSPAN3-205ENST00000558745 PCCAP05165 728 aaPredicted RBP17.64■□□□□ 0.41
TSPAN3-205ENST00000558745 APLP1P51693 650 aa17.64■□□□□ 0.41
TSPAN3-205ENST00000558745 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
TSPAN3-205ENST00000558745 RIC1Q4ADV7 1423 aa17.63■□□□□ 0.41
TSPAN3-205ENST00000558745 CRAMP1Q96RY5 1269 aa17.63■□□□□ 0.41
TSPAN3-205ENST00000558745 ABCC4O15439 1325 aa17.62■□□□□ 0.41
TSPAN3-205ENST00000558745 GCKRQ14397 625 aa17.62■□□□□ 0.41
TSPAN3-205ENST00000558745 BEND3Q5T5X7 828 aa17.62■□□□□ 0.41
TSPAN3-205ENST00000558745 SLC4A10Q6U841 1118 aa17.62■□□□□ 0.41
TSPAN3-205ENST00000558745 RNF181Q9P0P0 153 aa17.62■□□□□ 0.41
TSPAN3-205ENST00000558745 CACNA1FO60840 1977 aa17.62■□□□□ 0.41
TSPAN3-205ENST00000558745 H7C1W4 665 aa17.61■□□□□ 0.41
TSPAN3-205ENST00000558745 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
TSPAN3-205ENST00000558745 LINS1Q8NG48 757 aa17.61■□□□□ 0.41
TSPAN3-205ENST00000558745 ZNF526Q8TF50 670 aaPredicted RBP17.61■□□□□ 0.41
TSPAN3-205ENST00000558745 SMC4Q9NTJ3 1288 aa17.61■□□□□ 0.41
TSPAN3-205ENST00000558745 TAF1P21675 1872 aa17.61■□□□□ 0.41
TSPAN3-205ENST00000558745 LAMB2P55268 1798 aa17.61■□□□□ 0.41
TSPAN3-205ENST00000558745 DDX60Q8IY21 1712 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-205ENST00000558745 DDX46Q7L014 1031 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-205ENST00000558745 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
TSPAN3-205ENST00000558745 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-205ENST00000558745 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
TSPAN3-205ENST00000558745 PPEF1O14829 653 aaPredicted RBP17.59■□□□□ 0.41
TSPAN3-205ENST00000558745 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
TSPAN3-205ENST00000558745 ALDH1L2Q3SY69 923 aa17.59■□□□□ 0.41
TSPAN3-205ENST00000558745 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
TSPAN3-205ENST00000558745 COL4A1P02462 1669 aa17.59■□□□□ 0.41
TSPAN3-205ENST00000558745 ZBED9Q6R2W3 1325 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms