RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
CDC42BPB-202ENST00000558321 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
CDC42BPB-202ENST00000558321 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.16
CDC42BPB-202ENST00000558321 CRY2Q49AN0 593 aa16.02■□□□□ 0.16
CDC42BPB-202ENST00000558321 ANKRD13DQ6ZTN6 518 aa16.02■□□□□ 0.16
CDC42BPB-202ENST00000558321 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
CDC42BPB-202ENST00000558321 NUP98P52948 1817 aa16.02■□□□□ 0.16
CDC42BPB-202ENST00000558321 SBF1O95248 1867 aa16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 SLX4Q8IY92 1834 aa16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 NLRP10Q86W26 655 aa16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 CHMP4AQ9BY43 222 aa16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
CDC42BPB-202ENST00000558321 TCERG1O14776 1098 aaKnown RBP16■□□□□ 0.15
CDC42BPB-202ENST00000558321 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
CDC42BPB-202ENST00000558321 SLC10A5Q5PT55 438 aa16■□□□□ 0.15
CDC42BPB-202ENST00000558321 RBM46Q8TBY0 533 aaKnown RBP16■□□□□ 0.15
CDC42BPB-202ENST00000558321 TMX4Q9H1E5 349 aaPredicted RBP16■□□□□ 0.15
CDC42BPB-202ENST00000558321 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
CDC42BPB-202ENST00000558321 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
CDC42BPB-202ENST00000558321 CC2D2BQ6DHV5 1058 aa15.99■□□□□ 0.15
CDC42BPB-202ENST00000558321 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
CDC42BPB-202ENST00000558321 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
CDC42BPB-202ENST00000558321 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
CDC42BPB-202ENST00000558321 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
CDC42BPB-202ENST00000558321 CRAMP1Q96RY5 1269 aa15.99■□□□□ 0.15
CDC42BPB-202ENST00000558321 RNF123Q5XPI4 1314 aa15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 CCDC27Q2M243 656 aa15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 CCDC30Q5VVM6 783 aa15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 C3orf67Q6ZVT6 689 aa15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
CDC42BPB-202ENST00000558321 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
CDC42BPB-202ENST00000558321 CACNA1SQ13698 1873 aa15.97■□□□□ 0.15
CDC42BPB-202ENST00000558321 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
CDC42BPB-202ENST00000558321 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
CDC42BPB-202ENST00000558321 FSTL1Q12841 308 aa15.97■□□□□ 0.15
CDC42BPB-202ENST00000558321 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
CDC42BPB-202ENST00000558321 PHAXQ9H814 394 aaKnown RBP15.97■□□□□ 0.15
CDC42BPB-202ENST00000558321 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
CDC42BPB-202ENST00000558321 APLP1P51693 650 aa15.96■□□□□ 0.15
CDC42BPB-202ENST00000558321 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
CDC42BPB-202ENST00000558321 FER1L6Q2WGJ9 1857 aa15.96■□□□□ 0.15
CDC42BPB-202ENST00000558321 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 DDX46Q7L014 1031 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 TSPYL6Q8N831 410 aa15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 SMC1BQ8NDV3 1235 aa15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 FAM89AQ96GI7 184 aa15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 ISCA1Q9BUE6 129 aa15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 CCDC88AQ3V6T2 1871 aa15.95■□□□□ 0.14
CDC42BPB-202ENST00000558321 BBOX1O75936 387 aa15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 DDX58O95786 925 aaKnown RBP15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 PSMD1Q99460 953 aa15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 STK31Q9BXU1 1019 aa15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 ARFGEF2Q9Y6D5 1785 aa15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 IL16Q14005 1332 aa15.94■□□□□ 0.14
CDC42BPB-202ENST00000558321 TRIM28Q13263 835 aaKnown RBP15.93■□□□□ 0.14
CDC42BPB-202ENST00000558321 TIAM2Q8IVF5 1701 aa15.93■□□□□ 0.14
CDC42BPB-202ENST00000558321 ABCC4O15439 1325 aa15.93■□□□□ 0.14
CDC42BPB-202ENST00000558321 POTECB2RU33 542 aa15.92■□□□□ 0.14
CDC42BPB-202ENST00000558321 TWISTNBQ3B726 338 aaPredicted RBP15.92■□□□□ 0.14
CDC42BPB-202ENST00000558321 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
CDC42BPB-202ENST00000558321 LARGE2Q8N3Y3 721 aa15.92■□□□□ 0.14
CDC42BPB-202ENST00000558321 MYD88Q99836 296 aa15.92■□□□□ 0.14
CDC42BPB-202ENST00000558321 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
CDC42BPB-202ENST00000558321 EIF6P56537 245 aaKnown RBP15.91■□□□□ 0.14
CDC42BPB-202ENST00000558321 GRAPQ13588 217 aa15.91■□□□□ 0.14
CDC42BPB-202ENST00000558321 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
CDC42BPB-202ENST00000558321 GRAPLQ8TC17 118 aaPredicted RBP15.91■□□□□ 0.14
CDC42BPB-202ENST00000558321 IQCA1LA6NCM1 817 aa15.9■□□□□ 0.14
CDC42BPB-202ENST00000558321 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
CDC42BPB-202ENST00000558321 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
CDC42BPB-202ENST00000558321 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
CDC42BPB-202ENST00000558321 SP8Q8IXZ3 490 aa15.9■□□□□ 0.14
CDC42BPB-202ENST00000558321 SUPT20HQ8NEM7 779 aa15.9■□□□□ 0.14
CDC42BPB-202ENST00000558321 ZNF541Q9H0D2 1346 aa15.9■□□□□ 0.14
CDC42BPB-202ENST00000558321 FZD9O00144 591 aa15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 DPP8Q6V1X1 898 aaPredicted RBP15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 NIM1KQ8IY84 436 aa15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 MPNDQ8N594 471 aa15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 CCDC191Q8NCU4 936 aa15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 METTL22Q9BUU2 404 aaPredicted RBP15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 GJA3Q9Y6H8 435 aa15.89■□□□□ 0.13
CDC42BPB-202ENST00000558321 DICER1Q9UPY3 1922 aaKnown RBP15.88■□□□□ 0.13
CDC42BPB-202ENST00000558321 ANKRD36CQ5JPF3 1778 aa15.88■□□□□ 0.13
CDC42BPB-202ENST00000558321 PPIP5K2O43314 1243 aa15.88■□□□□ 0.13
CDC42BPB-202ENST00000558321 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
CDC42BPB-202ENST00000558321 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
CDC42BPB-202ENST00000558321 CWC25Q9NXE8 425 aaPredicted RBP15.88■□□□□ 0.13
CDC42BPB-202ENST00000558321 MAP3K2Q9Y2U5 619 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms