RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 MAP2K1Q02750 393 aaPredicted RBP16.35■□□□□ 0.21
SNX6-209ENST00000557265 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
SNX6-209ENST00000557265 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
SNX6-209ENST00000557265 DDX21Q9NR30 783 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNX6-209ENST00000557265 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
SNX6-209ENST00000557265 SNED1Q8TER0 1413 aa16.35■□□□□ 0.21
SNX6-209ENST00000557265 CACNA1SQ13698 1873 aa16.34■□□□□ 0.21
SNX6-209ENST00000557265 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
SNX6-209ENST00000557265 GPTP24298 496 aa16.34■□□□□ 0.21
SNX6-209ENST00000557265 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
SNX6-209ENST00000557265 EPS15P42566 896 aa16.34■□□□□ 0.21
SNX6-209ENST00000557265 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
SNX6-209ENST00000557265 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
SNX6-209ENST00000557265 FMR1Q06787 632 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNX6-209ENST00000557265 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
SNX6-209ENST00000557265 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
SNX6-209ENST00000557265 MYL6BP14649 208 aa16.32■□□□□ 0.2
SNX6-209ENST00000557265 SCNN1DP51172 638 aa16.32■□□□□ 0.2
SNX6-209ENST00000557265 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
SNX6-209ENST00000557265 SUSD4Q5VX71 490 aa16.32■□□□□ 0.2
SNX6-209ENST00000557265 SLC51AQ86UW1 340 aa16.32■□□□□ 0.2
SNX6-209ENST00000557265 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
SNX6-209ENST00000557265 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
SNX6-209ENST00000557265 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
SNX6-209ENST00000557265 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
SNX6-209ENST00000557265 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
SNX6-209ENST00000557265 EIF4A1P60842 406 aaKnown RBP16.31■□□□□ 0.2
SNX6-209ENST00000557265 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
SNX6-209ENST00000557265 ABHD8Q96I13 439 aa16.31■□□□□ 0.2
SNX6-209ENST00000557265 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
SNX6-209ENST00000557265 COL4A5P29400 1685 aa16.3■□□□□ 0.2
SNX6-209ENST00000557265 TRAF5O00463 557 aa16.3■□□□□ 0.2
SNX6-209ENST00000557265 NEFMP07197 916 aa16.3■□□□□ 0.2
SNX6-209ENST00000557265 GRM1Q13255 1194 aa16.3■□□□□ 0.2
SNX6-209ENST00000557265 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
SNX6-209ENST00000557265 USP50Q70EL3 339 aaPredicted RBP16.3■□□□□ 0.2
SNX6-209ENST00000557265 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
SNX6-209ENST00000557265 CAPNS2Q96L46 248 aa16.3■□□□□ 0.2
SNX6-209ENST00000557265 NTSR2O95665 410 aa16.29■□□□□ 0.2
SNX6-209ENST00000557265 CST9Q5W186 159 aa16.29■□□□□ 0.2
SNX6-209ENST00000557265 CYP4F22Q6NT55 531 aa16.29■□□□□ 0.2
SNX6-209ENST00000557265 NIM1KQ8IY84 436 aa16.29■□□□□ 0.2
SNX6-209ENST00000557265 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
SNX6-209ENST00000557265 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
SNX6-209ENST00000557265 IBTKQ9P2D0 1353 aaPredicted RBP16.28■□□□□ 0.2
SNX6-209ENST00000557265 PPIP5K2O43314 1243 aa16.28■□□□□ 0.2
SNX6-209ENST00000557265 ECE1P42892 770 aa16.28■□□□□ 0.2
SNX6-209ENST00000557265 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
SNX6-209ENST00000557265 BEGAINQ9BUH8 593 aa16.28■□□□□ 0.2
SNX6-209ENST00000557265 TMX4Q9H1E5 349 aaPredicted RBP16.28■□□□□ 0.2
SNX6-209ENST00000557265 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
SNX6-209ENST00000557265 AOC3Q16853 763 aa16.27■□□□□ 0.2
SNX6-209ENST00000557265 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
SNX6-209ENST00000557265 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
SNX6-209ENST00000557265 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
SNX6-209ENST00000557265 ADARB2Q9NS39 739 aaKnown RBP16.26■□□□□ 0.19
SNX6-209ENST00000557265 GPRC5DQ9NZD1 345 aa16.26■□□□□ 0.19
SNX6-209ENST00000557265 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
SNX6-209ENST00000557265 TLL2Q9Y6L7 1015 aa16.26■□□□□ 0.19
SNX6-209ENST00000557265 CXCL9Q07325 125 aa16.25■□□□□ 0.19
SNX6-209ENST00000557265 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
SNX6-209ENST00000557265 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
SNX6-209ENST00000557265 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
SNX6-209ENST00000557265 ZNRF3Q9ULT6 936 aa16.25■□□□□ 0.19
SNX6-209ENST00000557265 LTBP1Q14766 1721 aa16.25■□□□□ 0.19
SNX6-209ENST00000557265 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
SNX6-209ENST00000557265 FAM161AQ3B820 660 aa16.24■□□□□ 0.19
SNX6-209ENST00000557265 SLC10A5Q5PT55 438 aa16.24■□□□□ 0.19
SNX6-209ENST00000557265 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
SNX6-209ENST00000557265 TSKSQ9UJT2 592 aa16.24■□□□□ 0.19
SNX6-209ENST00000557265 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
SNX6-209ENST00000557265 AOC2O75106 756 aa16.23■□□□□ 0.19
SNX6-209ENST00000557265 CELF2O95319 508 aaKnown RBP16.23■□□□□ 0.19
SNX6-209ENST00000557265 MAP2K2P36507 400 aa16.23■□□□□ 0.19
SNX6-209ENST00000557265 GMPSP49915 693 aaPredicted RBP16.23■□□□□ 0.19
SNX6-209ENST00000557265 SUPT20HQ8NEM7 779 aa16.23■□□□□ 0.19
SNX6-209ENST00000557265 ABCC4O15439 1325 aa16.22■□□□□ 0.19
SNX6-209ENST00000557265 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
SNX6-209ENST00000557265 PDIA6Q15084 440 aa16.22■□□□□ 0.19
SNX6-209ENST00000557265 DPP8Q6V1X1 898 aaPredicted RBP16.22■□□□□ 0.19
SNX6-209ENST00000557265 LRP10Q7Z4F1 713 aa16.22■□□□□ 0.19
SNX6-209ENST00000557265 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
SNX6-209ENST00000557265 RTFDC1Q9BY42 306 aaPredicted RBP16.22■□□□□ 0.19
SNX6-209ENST00000557265 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
SNX6-209ENST00000557265 BBOX1O75936 387 aa16.21■□□□□ 0.19
SNX6-209ENST00000557265 ANXA1P04083 346 aa16.21■□□□□ 0.19
SNX6-209ENST00000557265 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
SNX6-209ENST00000557265 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
SNX6-209ENST00000557265 SP8Q8IXZ3 490 aa16.21■□□□□ 0.19
SNX6-209ENST00000557265 GLIS2Q9BZE0 524 aaPredicted RBP16.21■□□□□ 0.19
SNX6-209ENST00000557265 MAPK8IP3Q9UPT6 1336 aa16.2■□□□□ 0.18
SNX6-209ENST00000557265 RAD17O75943 681 aa16.2■□□□□ 0.18
SNX6-209ENST00000557265 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
SNX6-209ENST00000557265 MPNDQ8N594 471 aa16.2■□□□□ 0.18
SNX6-209ENST00000557265 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
SNX6-209ENST00000557265 PNNQ9H307 717 aaKnown RBP16.2■□□□□ 0.18
SNX6-209ENST00000557265 PGAP2Q9UHJ9 254 aa16.2■□□□□ 0.18
SNX6-209ENST00000557265 LAMB4A4D0S4 1761 aa16.2■□□□□ 0.18
SNX6-209ENST00000557265 HIRAP54198 1017 aaPredicted RBP16.19■□□□□ 0.18
SNX6-209ENST00000557265 KIAA2012Q0VF49 1180 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms