RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ZNF526Q8TF50 670 aaPredicted RBP11.79□□□□□ -0.52
VRK1-206ENST00000557222 NBPF3Q9H094 633 aa11.79□□□□□ -0.52
VRK1-206ENST00000557222 HCSTQ9UBK5 93 aa11.79□□□□□ -0.52
VRK1-206ENST00000557222 BCS1LQ9Y276 419 aa11.79□□□□□ -0.52
VRK1-206ENST00000557222 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
VRK1-206ENST00000557222 C4AP0C0L4 1744 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
VRK1-206ENST00000557222 TOMM70O94826 608 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 FCHSD2O94868 740 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 DPEP1P16444 411 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 KCNA3P22001 575 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 ARHGAP27Q6ZUM4 889 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 AEBP1Q8IUX7 1158 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 PIM2Q9P1W9 311 aa11.78□□□□□ -0.52
VRK1-206ENST00000557222 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
VRK1-206ENST00000557222 APLP1P51693 650 aa11.77□□□□□ -0.53
VRK1-206ENST00000557222 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
VRK1-206ENST00000557222 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.53
VRK1-206ENST00000557222 TM4SF1P30408 202 aa11.76□□□□□ -0.53
VRK1-206ENST00000557222 INTS5Q6P9B9 1019 aaKnown RBP11.76□□□□□ -0.53
VRK1-206ENST00000557222 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
VRK1-206ENST00000557222 N4BP2Q86UW6 1770 aaPredicted RBP11.75□□□□□ -0.53
VRK1-206ENST00000557222 TRIM6-TRIM34B2RNG4 842 aa11.75□□□□□ -0.53
VRK1-206ENST00000557222 ZPR1O75312 459 aa11.75□□□□□ -0.53
VRK1-206ENST00000557222 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
VRK1-206ENST00000557222 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
VRK1-206ENST00000557222 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
VRK1-206ENST00000557222 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
VRK1-206ENST00000557222 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
VRK1-206ENST00000557222 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
VRK1-206ENST00000557222 POLRMTO00411 1230 aaKnown RBP11.73□□□□□ -0.53
VRK1-206ENST00000557222 RNMTO43148 476 aaKnown RBP11.73□□□□□ -0.53
VRK1-206ENST00000557222 CYP19A1P11511 503 aaPredicted RBP11.73□□□□□ -0.53
VRK1-206ENST00000557222 MLLT3P42568 568 aaPredicted RBP11.73□□□□□ -0.53
VRK1-206ENST00000557222 SOS1Q07889 1333 aaPredicted RBP11.73□□□□□ -0.53
VRK1-206ENST00000557222 DDR1Q08345 913 aa11.73□□□□□ -0.53
VRK1-206ENST00000557222 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
VRK1-206ENST00000557222 RBM46Q8TBY0 533 aaKnown RBP11.73□□□□□ -0.53
VRK1-206ENST00000557222 SRP68Q9UHB9 627 aaKnown RBP11.73□□□□□ -0.53
VRK1-206ENST00000557222 NARFQ9UHQ1 456 aa11.73□□□□□ -0.53
VRK1-206ENST00000557222 MRC1P22897 1456 aa11.72□□□□□ -0.53
VRK1-206ENST00000557222 KDM2BQ8NHM5 1336 aa11.72□□□□□ -0.53
VRK1-206ENST00000557222 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
VRK1-206ENST00000557222 FSTL1Q12841 308 aa11.72□□□□□ -0.53
VRK1-206ENST00000557222 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
VRK1-206ENST00000557222 WNT2BQ93097 391 aa11.72□□□□□ -0.53
VRK1-206ENST00000557222 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
VRK1-206ENST00000557222 TJP1Q07157 1748 aa11.72□□□□□ -0.53
VRK1-206ENST00000557222 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
VRK1-206ENST00000557222 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.53
VRK1-206ENST00000557222 DNAJC5GQ8N7S2 189 aa11.71□□□□□ -0.53
VRK1-206ENST00000557222 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.53
VRK1-206ENST00000557222 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.54
VRK1-206ENST00000557222 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
VRK1-206ENST00000557222 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
VRK1-206ENST00000557222 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
VRK1-206ENST00000557222 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
VRK1-206ENST00000557222 TEX13AQ9BXU3 409 aaPredicted RBP11.7□□□□□ -0.54
VRK1-206ENST00000557222 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
VRK1-206ENST00000557222 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
VRK1-206ENST00000557222 PDZRN3Q9UPQ7 1066 aa11.7□□□□□ -0.54
VRK1-206ENST00000557222 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
VRK1-206ENST00000557222 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
VRK1-206ENST00000557222 A0A087WZG4 1122 aa11.69□□□□□ -0.54
VRK1-206ENST00000557222 STARD3NLO95772 234 aa11.69□□□□□ -0.54
VRK1-206ENST00000557222 PTPN5P54829 565 aa11.69□□□□□ -0.54
VRK1-206ENST00000557222 NFIXQ14938 502 aa11.69□□□□□ -0.54
VRK1-206ENST00000557222 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
VRK1-206ENST00000557222 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
VRK1-206ENST00000557222 CDCA7LQ96GN5 454 aa11.69□□□□□ -0.54
VRK1-206ENST00000557222 SEPT9Q9UHD8 586 aaPredicted RBP11.69□□□□□ -0.54
VRK1-206ENST00000557222 COL15A1P39059 1388 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 SERPINB2P05120 415 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 HMOX1P09601 288 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 CHRNA5P30532 468 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 PRSS12P56730 875 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 RNF181Q9P0P0 153 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 KCPQ6ZWJ8 1503 aa11.68□□□□□ -0.54
VRK1-206ENST00000557222 EIF5P55010 431 aaKnown RBP11.67□□□□□ -0.54
VRK1-206ENST00000557222 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
VRK1-206ENST00000557222 TTC5Q8N0Z6 440 aa11.67□□□□□ -0.54
VRK1-206ENST00000557222 TTLL6Q8N841 843 aa11.67□□□□□ -0.54
VRK1-206ENST00000557222 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
VRK1-206ENST00000557222 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
VRK1-206ENST00000557222 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
VRK1-206ENST00000557222 SBF1O95248 1867 aa11.66□□□□□ -0.54
VRK1-206ENST00000557222 H0YIN7 160 aa11.66□□□□□ -0.54
VRK1-206ENST00000557222 LMNB1P20700 586 aa11.66□□□□□ -0.54
VRK1-206ENST00000557222 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
VRK1-206ENST00000557222 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
VRK1-206ENST00000557222 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.54
VRK1-206ENST00000557222 SEMA3EO15041 775 aa11.65□□□□□ -0.54
VRK1-206ENST00000557222 TEFQ10587 303 aa11.65□□□□□ -0.54
VRK1-206ENST00000557222 ZNF790Q6PG37 636 aa11.65□□□□□ -0.54
VRK1-206ENST00000557222 ANKK1Q8NFD2 765 aa11.65□□□□□ -0.54
VRK1-206ENST00000557222 RRAGCQ9HB90 399 aa11.65□□□□□ -0.54
VRK1-206ENST00000557222 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms