RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 NEXNQ0ZGT2 675 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 ALDH1L2Q3SY69 923 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 STYK1Q6J9G0 422 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
CHD8-206ENST00000553870 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 CNKSR1Q969H4 720 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 MASTLQ96GX5 879 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 MAP3K2Q9Y2U5 619 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 TCERG1O14776 1098 aaKnown RBP11.92□□□□□ -0.5
CHD8-206ENST00000553870 NPR1P16066 1061 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 YBX3P16989 372 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHD8-206ENST00000553870 ALDH1B1P30837 517 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 FKBP5Q13451 457 aaPredicted RBP11.92□□□□□ -0.5
CHD8-206ENST00000553870 ERFEQ4G0M1 354 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 G2E3Q7L622 706 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 NLRP3Q96P20 1036 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
CHD8-206ENST00000553870 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 RIC1Q4ADV7 1423 aa11.92□□□□□ -0.5
CHD8-206ENST00000553870 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
CHD8-206ENST00000553870 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
CHD8-206ENST00000553870 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
CHD8-206ENST00000553870 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
CHD8-206ENST00000553870 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
CHD8-206ENST00000553870 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
CHD8-206ENST00000553870 ZNF622Q969S3 477 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHD8-206ENST00000553870 MYD88Q99836 296 aa11.91□□□□□ -0.5
CHD8-206ENST00000553870 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
CHD8-206ENST00000553870 HOXA10P31260 410 aaPredicted RBP11.9□□□□□ -0.5
CHD8-206ENST00000553870 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
CHD8-206ENST00000553870 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.5
CHD8-206ENST00000553870 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.5
CHD8-206ENST00000553870 ADCY9O60503 1353 aa11.9□□□□□ -0.5
CHD8-206ENST00000553870 PTPRCP08575 1304 aa11.89□□□□□ -0.51
CHD8-206ENST00000553870 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
CHD8-206ENST00000553870 PCCAP05165 728 aaPredicted RBP11.89□□□□□ -0.51
CHD8-206ENST00000553870 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
CHD8-206ENST00000553870 LINS1Q8NG48 757 aa11.89□□□□□ -0.51
CHD8-206ENST00000553870 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
CHD8-206ENST00000553870 RBM17Q96I25 401 aaKnown RBP11.89□□□□□ -0.51
CHD8-206ENST00000553870 CRAMP1Q96RY5 1269 aa11.89□□□□□ -0.51
CHD8-206ENST00000553870 ANKRD36CQ5JPF3 1778 aa11.88□□□□□ -0.51
CHD8-206ENST00000553870 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
CHD8-206ENST00000553870 NEURL1BA8MQ27 555 aa11.88□□□□□ -0.51
CHD8-206ENST00000553870 IGKV5-2P06315 115 aa11.88□□□□□ -0.51
CHD8-206ENST00000553870 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
CHD8-206ENST00000553870 FAM89AQ96GI7 184 aa11.88□□□□□ -0.51
CHD8-206ENST00000553870 IRS4O14654 1257 aaPredicted RBP11.87□□□□□ -0.51
CHD8-206ENST00000553870 SF3B3Q15393 1217 aaKnown RBP11.87□□□□□ -0.51
CHD8-206ENST00000553870 CC2D2BQ6DHV5 1058 aa11.87□□□□□ -0.51
CHD8-206ENST00000553870 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
CHD8-206ENST00000553870 RPGRQ92834 1020 aaKnown RBP11.87□□□□□ -0.51
CHD8-206ENST00000553870 ABCC12Q96J65 1359 aa11.87□□□□□ -0.51
CHD8-206ENST00000553870 ANKRD31Q8N7Z5 1873 aa11.87□□□□□ -0.51
CHD8-206ENST00000553870 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 H7C1W4 665 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 ALDH1L1O75891 902 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 BBOX1O75936 387 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
CHD8-206ENST00000553870 RARSP54136 660 aaKnown RBP11.86□□□□□ -0.51
CHD8-206ENST00000553870 GCKRQ14397 625 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
CHD8-206ENST00000553870 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 SMC4Q9NTJ3 1288 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
CHD8-206ENST00000553870 BRCA1P38398 1863 aaKnown RBP11.86□□□□□ -0.51
CHD8-206ENST00000553870 DLEC1Q9Y238 1755 aa11.85□□□□□ -0.51
CHD8-206ENST00000553870 F6X3S4 739 aa11.85□□□□□ -0.51
CHD8-206ENST00000553870 PDE8AO60658 829 aa11.85□□□□□ -0.51
CHD8-206ENST00000553870 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
CHD8-206ENST00000553870 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
CHD8-206ENST00000553870 TMC4Q7Z404 712 aa11.85□□□□□ -0.51
CHD8-206ENST00000553870 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
CHD8-206ENST00000553870 IPO8O15397 1037 aaKnown RBP11.84□□□□□ -0.51
CHD8-206ENST00000553870 C21orf2O43822 256 aa11.84□□□□□ -0.51
CHD8-206ENST00000553870 CWF19L2Q2TBE0 894 aaKnown RBP11.84□□□□□ -0.51
CHD8-206ENST00000553870 RTKN2Q8IZC4 609 aa11.84□□□□□ -0.51
CHD8-206ENST00000553870 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
CHD8-206ENST00000553870 API5Q9BZZ5 524 aaKnown RBP11.84□□□□□ -0.51
CHD8-206ENST00000553870 SRCIN1Q9C0H9 1055 aa11.84□□□□□ -0.51
CHD8-206ENST00000553870 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
CHD8-206ENST00000553870 ARFGEF1Q9Y6D6 1849 aa11.83□□□□□ -0.51
CHD8-206ENST00000553870 YY1P25490 414 aa11.83□□□□□ -0.52
CHD8-206ENST00000553870 CCDC152Q4G0S7 254 aa11.83□□□□□ -0.52
CHD8-206ENST00000553870 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
CHD8-206ENST00000553870 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
CHD8-206ENST00000553870 LTBP3Q9NS15 1303 aa11.83□□□□□ -0.52
CHD8-206ENST00000553870 GRAPQ13588 217 aa11.82□□□□□ -0.52
CHD8-206ENST00000553870 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
CHD8-206ENST00000553870 RTL5Q5HYW3 569 aaPredicted RBP11.82□□□□□ -0.52
CHD8-206ENST00000553870 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
CHD8-206ENST00000553870 SP8Q8IXZ3 490 aa11.82□□□□□ -0.52
CHD8-206ENST00000553870 GRAPLQ8TC17 118 aaPredicted RBP11.82□□□□□ -0.52
CHD8-206ENST00000553870 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
CHD8-206ENST00000553870 C9orf78Q9NZ63 289 aaPredicted RBP11.82□□□□□ -0.52
CHD8-206ENST00000553870 NOB1Q9ULX3 412 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms