RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 MYD88Q99836 296 aa13.96□□□□□ -0.17
CNOT2-239ENST00000552483 RIC1Q4ADV7 1423 aa13.96□□□□□ -0.18
CNOT2-239ENST00000552483 COL4A1P02462 1669 aa13.95□□□□□ -0.18
CNOT2-239ENST00000552483 FLIIQ13045 1269 aa13.95□□□□□ -0.18
CNOT2-239ENST00000552483 PIM2Q9P1W9 311 aa13.95□□□□□ -0.18
CNOT2-239ENST00000552483 MAP3K2Q9Y2U5 619 aa13.95□□□□□ -0.18
CNOT2-239ENST00000552483 KLRG2A4D1S0 409 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-239ENST00000552483 PI4KAP2A4QPH2 592 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 SBF1O95248 1867 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 SRGNP10124 158 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 PDE6BP35913 854 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 KSR2Q6VAB6 950 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 SLC51AQ86UW1 340 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 PI4KAP1Q8N8J0 262 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 METTL22Q9BUU2 404 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-239ENST00000552483 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
CNOT2-239ENST00000552483 NYXQ9GZU5 481 aa13.94□□□□□ -0.18
CNOT2-239ENST00000552483 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
CNOT2-239ENST00000552483 H0YIN7 160 aa13.93□□□□□ -0.18
CNOT2-239ENST00000552483 IGKV5-2P06315 115 aa13.93□□□□□ -0.18
CNOT2-239ENST00000552483 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
CNOT2-239ENST00000552483 DALRD3Q5D0E6 543 aaKnown RBP13.93□□□□□ -0.18
CNOT2-239ENST00000552483 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
CNOT2-239ENST00000552483 ZNF622Q969S3 477 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■□□□□ 10
CNOT2-239ENST00000552483 FER1L6Q2WGJ9 1857 aa13.93□□□□□ -0.18
CNOT2-239ENST00000552483 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
CNOT2-239ENST00000552483 F6X3S4 739 aa13.92□□□□□ -0.18
CNOT2-239ENST00000552483 DDX58O95786 925 aaKnown RBP13.92□□□□□ -0.18
CNOT2-239ENST00000552483 HCLS1P14317 486 aaPredicted RBP13.92□□□□□ -0.18
CNOT2-239ENST00000552483 RTL5Q5HYW3 569 aaPredicted RBP13.92□□□□□ -0.18
CNOT2-239ENST00000552483 SSH1Q8WYL5 1049 aa13.92□□□□□ -0.18
CNOT2-239ENST00000552483 JARID2Q92833 1246 aaPredicted RBP13.92□□□□□ -0.18
CNOT2-239ENST00000552483 BCL2L13Q9BXK5 485 aa13.92□□□□□ -0.18
CNOT2-239ENST00000552483 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
CNOT2-239ENST00000552483 TRMT112Q9UI30 125 aaKnown RBP13.92□□□□□ -0.18
CNOT2-239ENST00000552483 ZBED9Q6R2W3 1325 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 GRIN3BO60391 1043 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 TRIM28Q13263 835 aaKnown RBP13.91□□□□□ -0.18
CNOT2-239ENST00000552483 FKBP5Q13451 457 aaPredicted RBP13.91□□□□□ -0.18
CNOT2-239ENST00000552483 CWF19L2Q2TBE0 894 aaKnown RBP13.91□□□□□ -0.18
CNOT2-239ENST00000552483 CRY2Q49AN0 593 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 STYK1Q6J9G0 422 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 TTLL6Q8N841 843 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 FAM89AQ96GI7 184 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 MASTLQ96GX5 879 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
CNOT2-239ENST00000552483 MYH3P11055 1940 aa13.91□□□□□ -0.18
CNOT2-239ENST00000552483 SH3TC1Q8TE82 1336 aa13.9□□□□□ -0.18
CNOT2-239ENST00000552483 DNAAF4Q8WXU2 420 aa13.9□□□□□ -0.18
CNOT2-239ENST00000552483 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.19
CNOT2-239ENST00000552483 NEURL1BA8MQ27 555 aa13.89□□□□□ -0.19
CNOT2-239ENST00000552483 NPR1P16066 1061 aa13.89□□□□□ -0.19
CNOT2-239ENST00000552483 PRELPP51888 382 aa13.89□□□□□ -0.19
CNOT2-239ENST00000552483 PRPF40BQ6NWY9 871 aaKnown RBP13.89□□□□□ -0.19
CNOT2-239ENST00000552483 OLFM4Q6UX06 510 aa13.89□□□□□ -0.19
CNOT2-239ENST00000552483 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
CNOT2-239ENST00000552483 RASSF7Q02833 373 aa13.88□□□□□ -0.19
CNOT2-239ENST00000552483 ARHGAP27Q6ZUM4 889 aa13.88□□□□□ -0.19
CNOT2-239ENST00000552483 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
CNOT2-239ENST00000552483 CWC25Q9NXE8 425 aaPredicted RBP13.88□□□□□ -0.19
CNOT2-239ENST00000552483 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
CNOT2-239ENST00000552483 SPEF2Q9C093 1822 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 NFKBIEO00221 500 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 C21orf2O43822 256 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 PCCAP05165 728 aaPredicted RBP13.87□□□□□ -0.19
CNOT2-239ENST00000552483 HOXA10P31260 410 aaPredicted RBP13.87□□□□□ -0.19
CNOT2-239ENST00000552483 ALDH1L2Q3SY69 923 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 BEND3Q5T5X7 828 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 ZBTB38Q8NAP3 1195 aaPredicted RBP13.87□□□□□ -0.19
CNOT2-239ENST00000552483 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 NLRP3Q96P20 1036 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 LRRC37AA6NMS7 1700 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 TIAM2Q8IVF5 1701 aa13.87□□□□□ -0.19
CNOT2-239ENST00000552483 DICER1Q9UPY3 1922 aaKnown RBP13.86□□□□□ -0.19
CNOT2-239ENST00000552483 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
CNOT2-239ENST00000552483 YY1P25490 414 aa13.86□□□□□ -0.19
CNOT2-239ENST00000552483 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
CNOT2-239ENST00000552483 ABCC4O15439 1325 aa13.86□□□□□ -0.19
CNOT2-239ENST00000552483 CT47B1P0C2W7 299 aaPredicted RBP13.85□□□□□ -0.19
CNOT2-239ENST00000552483 RARSP54136 660 aaKnown RBP13.85□□□□□ -0.19
CNOT2-239ENST00000552483 CASP7P55210 303 aa13.85□□□□□ -0.19
CNOT2-239ENST00000552483 NEXNQ0ZGT2 675 aa13.85□□□□□ -0.19
CNOT2-239ENST00000552483 GCKRQ14397 625 aa13.85□□□□□ -0.19
CNOT2-239ENST00000552483 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
CNOT2-239ENST00000552483 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
CNOT2-239ENST00000552483 CDHR2Q9BYE9 1310 aa13.85□□□□□ -0.19
CNOT2-239ENST00000552483 H7C1W4 665 aa13.84□□□□□ -0.19
CNOT2-239ENST00000552483 CRAMP1Q96RY5 1269 aa13.84□□□□□ -0.19
CNOT2-239ENST00000552483 SF3B3Q15393 1217 aaKnown RBP13.83□□□□□ -0.2
CNOT2-239ENST00000552483 SLC4A10Q6U841 1118 aa13.83□□□□□ -0.2
CNOT2-239ENST00000552483 UBE3BQ7Z3V4 1068 aa13.83□□□□□ -0.2
CNOT2-239ENST00000552483 RBM17Q96I25 401 aaKnown RBP13.83□□□□□ -0.2
CNOT2-239ENST00000552483 CCDC85AQ96PX6 553 aaPredicted RBP13.83□□□□□ -0.2
CNOT2-239ENST00000552483 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
CNOT2-239ENST00000552483 LTBP1Q14766 1721 aa13.82□□□□□ -0.2
CNOT2-239ENST00000552483 PDE8AO60658 829 aa13.82□□□□□ -0.2
CNOT2-239ENST00000552483 BCAR3O75815 825 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms