RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CEP290O15078 2479 aa18.69■□□□□ 0.58
SNRPF-203ENST00000551316 A0A087WZG4 1122 aa18.69■□□□□ 0.58
SNRPF-203ENST00000551316 VSIG10Q8N0Z9 540 aa18.69■□□□□ 0.58
SNRPF-203ENST00000551316 ADARB2Q9NS39 739 aaKnown RBP18.69■□□□□ 0.58
SNRPF-203ENST00000551316 ABCC12Q96J65 1359 aa18.68■□□□□ 0.58
SNRPF-203ENST00000551316 RNMTO43148 476 aaKnown RBP18.68■□□□□ 0.58
SNRPF-203ENST00000551316 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
SNRPF-203ENST00000551316 PGAP2Q9UHJ9 254 aa18.67■□□□□ 0.58
SNRPF-203ENST00000551316 A1BGP04217 495 aa18.65■□□□□ 0.58
SNRPF-203ENST00000551316 AKAP4Q5JQC9 854 aa18.65■□□□□ 0.58
SNRPF-203ENST00000551316 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
SNRPF-203ENST00000551316 RGMBQ6NW40 437 aa18.65■□□□□ 0.58
SNRPF-203ENST00000551316 NBPF5PQ86XG9 351 aaPredicted RBP18.65■□□□□ 0.58
SNRPF-203ENST00000551316 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
SNRPF-203ENST00000551316 GMPSP49915 693 aaPredicted RBP18.64■□□□□ 0.57
SNRPF-203ENST00000551316 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
SNRPF-203ENST00000551316 CSRNP1Q96S65 589 aa18.64■□□□□ 0.57
SNRPF-203ENST00000551316 NPC1L1Q9UHC9 1359 aa18.64■□□□□ 0.57
SNRPF-203ENST00000551316 HEG1Q9ULI3 1381 aa18.64■□□□□ 0.57
SNRPF-203ENST00000551316 POTEFA5A3E0 1075 aa18.63■□□□□ 0.57
SNRPF-203ENST00000551316 FAM177BA6PVY3 158 aa18.63■□□□□ 0.57
SNRPF-203ENST00000551316 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
SNRPF-203ENST00000551316 COLQQ9Y215 455 aaPredicted RBP18.63■□□□□ 0.57
SNRPF-203ENST00000551316 USP48Q86UV5 1035 aa18.62■□□□□ 0.57
SNRPF-203ENST00000551316 STARD3NLO95772 234 aa18.61■□□□□ 0.57
SNRPF-203ENST00000551316 CXCL9Q07325 125 aa18.61■□□□□ 0.57
SNRPF-203ENST00000551316 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
SNRPF-203ENST00000551316 KIAA0100Q14667 2235 aaKnown RBP18.6■□□□□ 0.57
SNRPF-203ENST00000551316 SLC10A3P09131 477 aa18.6■□□□□ 0.57
SNRPF-203ENST00000551316 AOC3Q16853 763 aa18.6■□□□□ 0.57
SNRPF-203ENST00000551316 ZNF296Q8WUU4 475 aaPredicted RBP18.6■□□□□ 0.57
SNRPF-203ENST00000551316 RIC1Q4ADV7 1423 aa18.59■□□□□ 0.57
SNRPF-203ENST00000551316 NUP98P52948 1817 aa18.59■□□□□ 0.57
SNRPF-203ENST00000551316 ADM5C9JUS6 153 aa18.59■□□□□ 0.57
SNRPF-203ENST00000551316 NIM1KQ8IY84 436 aa18.59■□□□□ 0.57
SNRPF-203ENST00000551316 KDM3BQ7LBC6 1761 aa18.59■□□□□ 0.57
SNRPF-203ENST00000551316 UNC80Q8N2C7 3258 aa18.59■□□□□ 0.57
SNRPF-203ENST00000551316 LAMB2P55268 1798 aa18.58■□□□□ 0.57
SNRPF-203ENST00000551316 EGFRP00533 1210 aa18.58■□□□□ 0.56
SNRPF-203ENST00000551316 ZNF157P51786 506 aaPredicted RBP18.58■□□□□ 0.56
SNRPF-203ENST00000551316 CDC37L1Q7L3B6 337 aa18.58■□□□□ 0.56
SNRPF-203ENST00000551316 DUOX1Q9NRD9 1551 aa18.58■□□□□ 0.56
SNRPF-203ENST00000551316 TCERG1O14776 1098 aaKnown RBP18.57■□□□□ 0.56
SNRPF-203ENST00000551316 CRY2Q49AN0 593 aa18.57■□□□□ 0.56
SNRPF-203ENST00000551316 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
SNRPF-203ENST00000551316 PPIP5K2O43314 1243 aa18.56■□□□□ 0.56
SNRPF-203ENST00000551316 LAMA3Q16787 3333 aa18.55■□□□□ 0.56
SNRPF-203ENST00000551316 TAF1P21675 1872 aa18.55■□□□□ 0.56
SNRPF-203ENST00000551316 PRAMEF22A3QJZ6 481 aa18.55■□□□□ 0.56
SNRPF-203ENST00000551316 TBC1D8O95759 1140 aa18.55■□□□□ 0.56
SNRPF-203ENST00000551316 ALDH1B1P30837 517 aa18.55■□□□□ 0.56
SNRPF-203ENST00000551316 FBXO46Q6PJ61 603 aaPredicted RBP18.55■□□□□ 0.56
SNRPF-203ENST00000551316 RASAL3Q86YV0 1011 aa18.55■□□□□ 0.56
SNRPF-203ENST00000551316 IL13P35225 146 aa18.54■□□□□ 0.56
SNRPF-203ENST00000551316 MTHFSDQ2M296 383 aaKnown RBP18.54■□□□□ 0.56
SNRPF-203ENST00000551316 SLC17A8Q8NDX2 589 aa18.54■□□□□ 0.56
SNRPF-203ENST00000551316 ZC3H15Q8WU90 426 aaKnown RBP18.54■□□□□ 0.56
SNRPF-203ENST00000551316 NIP7Q9Y221 180 aaKnown RBP eCLIP18.54■□□□□ 0.56
SNRPF-203ENST00000551316 KCNQ3O43525 872 aa18.53■□□□□ 0.56
SNRPF-203ENST00000551316 PKN2Q16513 984 aaKnown RBP18.53■□□□□ 0.56
SNRPF-203ENST00000551316 C3orf67Q6ZVT6 689 aa18.53■□□□□ 0.56
SNRPF-203ENST00000551316 NUTM1Q86Y26 1132 aa18.53■□□□□ 0.56
SNRPF-203ENST00000551316 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
SNRPF-203ENST00000551316 CCDC102AQ96A19 550 aa18.53■□□□□ 0.56
SNRPF-203ENST00000551316 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
SNRPF-203ENST00000551316 RAD17O75943 681 aa18.52■□□□□ 0.56
SNRPF-203ENST00000551316 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
SNRPF-203ENST00000551316 HLFQ16534 295 aa18.51■□□□□ 0.55
SNRPF-203ENST00000551316 ZNF790Q6PG37 636 aa18.51■□□□□ 0.55
SNRPF-203ENST00000551316 SAMD7Q7Z3H4 446 aa18.51■□□□□ 0.55
SNRPF-203ENST00000551316 R3HDMLQ9H3Y0 253 aa18.51■□□□□ 0.55
SNRPF-203ENST00000551316 ASTN2O75129 1339 aaPredicted RBP18.5■□□□□ 0.55
SNRPF-203ENST00000551316 CDHR2Q9BYE9 1310 aa18.5■□□□□ 0.55
SNRPF-203ENST00000551316 YDJCA8MPS7 323 aa18.5■□□□□ 0.55
SNRPF-203ENST00000551316 PPEF1O14829 653 aaPredicted RBP18.5■□□□□ 0.55
SNRPF-203ENST00000551316 HMOX1P09601 288 aa18.5■□□□□ 0.55
SNRPF-203ENST00000551316 TPTE2Q6XPS3 522 aa18.5■□□□□ 0.55
SNRPF-203ENST00000551316 KRT26Q7Z3Y9 468 aa18.5■□□□□ 0.55
SNRPF-203ENST00000551316 MICALL2Q8IY33 904 aa18.5■□□□□ 0.55
SNRPF-203ENST00000551316 ZNRF3Q9ULT6 936 aa18.5■□□□□ 0.55
SNRPF-203ENST00000551316 CC2D2BQ6DHV5 1058 aa18.49■□□□□ 0.55
SNRPF-203ENST00000551316 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
SNRPF-203ENST00000551316 CNOT7Q9UIV1 285 aaKnown RBP18.49■□□□□ 0.55
SNRPF-203ENST00000551316 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
SNRPF-203ENST00000551316 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
SNRPF-203ENST00000551316 SCN9AQ15858 1988 aa18.49■□□□□ 0.55
SNRPF-203ENST00000551316 LRRC37AA6NMS7 1700 aa18.49■□□□□ 0.55
SNRPF-203ENST00000551316 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
SNRPF-203ENST00000551316 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
SNRPF-203ENST00000551316 C2orf69Q8N8R5 385 aa18.48■□□□□ 0.55
SNRPF-203ENST00000551316 BCL2L13Q9BXK5 485 aa18.48■□□□□ 0.55
SNRPF-203ENST00000551316 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
SNRPF-203ENST00000551316 GPR25O00155 361 aa18.47■□□□□ 0.55
SNRPF-203ENST00000551316 EN2P19622 333 aaPredicted RBP18.47■□□□□ 0.55
SNRPF-203ENST00000551316 HOXA10P31260 410 aaPredicted RBP18.47■□□□□ 0.55
SNRPF-203ENST00000551316 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
SNRPF-203ENST00000551316 OTUD5Q96G74 571 aa18.47■□□□□ 0.55
SNRPF-203ENST00000551316 COL4A1P02462 1669 aa18.46■□□□□ 0.55
SNRPF-203ENST00000551316 DDX60Q8IY21 1712 aaKnown RBP18.46■□□□□ 0.55
SNRPF-203ENST00000551316 MOB2Q70IA6 237 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms