RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 CLEC4GQ6UXB4 293 aa16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 NLRP10Q86W26 655 aa16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 ZNF34Q8IZ26 560 aa16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 ZBTB38Q8NAP3 1195 aaPredicted RBP16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 LRRCC1Q9C099 1032 aa16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 EXOC6BQ9Y2D4 811 aa16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
CALCOCO1-214ENST00000549613 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
CALCOCO1-214ENST00000549613 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
CALCOCO1-214ENST00000549613 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
CALCOCO1-214ENST00000549613 EP400Q96L91 3159 aa16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 HSP90B1P14625 803 aaKnown RBP16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 KCNQ4P56696 695 aa16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 JARID2Q92833 1246 aaPredicted RBP16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 KIF1BPQ96EK5 621 aa16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 NUP98P52948 1817 aa16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 CDHR2Q9BYE9 1310 aa16.93■□□□□ 0.3
CALCOCO1-214ENST00000549613 APBB1O00213 710 aa16.92■□□□□ 0.3
CALCOCO1-214ENST00000549613 GNPATO15228 680 aa16.92■□□□□ 0.3
CALCOCO1-214ENST00000549613 GPTP24298 496 aa16.92■□□□□ 0.3
CALCOCO1-214ENST00000549613 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.3
CALCOCO1-214ENST00000549613 OS9Q13438 667 aaPredicted RBP16.92■□□□□ 0.3
CALCOCO1-214ENST00000549613 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
CALCOCO1-214ENST00000549613 AK7Q96M32 723 aa16.92■□□□□ 0.3
CALCOCO1-214ENST00000549613 PLSCR1O15162 318 aa16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 FOXO4P98177 505 aa16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 SF3B2Q13435 895 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 LMBR1LQ6UX01 489 aa16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 TRMT112Q9UI30 125 aaKnown RBP16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 ANKRD36CQ5JPF3 1778 aa16.91■□□□□ 0.3
CALCOCO1-214ENST00000549613 ZPR1O75312 459 aa16.9■□□□□ 0.3
CALCOCO1-214ENST00000549613 ADRA2BP18089 450 aa16.9■□□□□ 0.3
CALCOCO1-214ENST00000549613 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
CALCOCO1-214ENST00000549613 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
CALCOCO1-214ENST00000549613 UTP14AQ9BVJ6 771 aaKnown RBP16.9■□□□□ 0.3
CALCOCO1-214ENST00000549613 COPRSQ9NQ92 184 aa16.9■□□□□ 0.3
CALCOCO1-214ENST00000549613 TAF1LQ8IZX4 1826 aa16.89■□□□□ 0.29
CALCOCO1-214ENST00000549613 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.29
CALCOCO1-214ENST00000549613 APBA3O96018 575 aa16.89■□□□□ 0.29
CALCOCO1-214ENST00000549613 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
CALCOCO1-214ENST00000549613 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
CALCOCO1-214ENST00000549613 PLEKHM2Q8IWE5 1019 aa16.89■□□□□ 0.29
CALCOCO1-214ENST00000549613 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
CALCOCO1-214ENST00000549613 BMP2KLQ5H9B9 411 aa16.88■□□□□ 0.29
CALCOCO1-214ENST00000549613 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
CALCOCO1-214ENST00000549613 NIP7Q9Y221 180 aaKnown RBP eCLIP16.88■□□□□ 0.29
CALCOCO1-214ENST00000549613 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
CALCOCO1-214ENST00000549613 C4BP0C0L5 1744 aa16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 IRS4O14654 1257 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 PDE8AO60658 829 aa16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 RFC4P35249 363 aa16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 RFX5P48382 616 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 SUSD4Q5VX71 490 aa16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 C16orf71Q8IYS4 520 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
CALCOCO1-214ENST00000549613 CSF1RP07333 972 aa16.86■□□□□ 0.29
CALCOCO1-214ENST00000549613 USPL1Q5W0Q7 1092 aa16.86■□□□□ 0.29
CALCOCO1-214ENST00000549613 ARHGEF1Q92888 912 aaKnown RBP16.86■□□□□ 0.29
CALCOCO1-214ENST00000549613 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
CALCOCO1-214ENST00000549613 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
CALCOCO1-214ENST00000549613 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
CALCOCO1-214ENST00000549613 UBN2Q6ZU65 1347 aa16.86■□□□□ 0.29
CALCOCO1-214ENST00000549613 PTPN12Q05209 780 aaKnown RBP16.85■□□□□ 0.29
CALCOCO1-214ENST00000549613 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
CALCOCO1-214ENST00000549613 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
CALCOCO1-214ENST00000549613 BCORQ6W2J9 1755 aa16.84■□□□□ 0.29
CALCOCO1-214ENST00000549613 SSFA2P28290 1259 aa16.84■□□□□ 0.29
CALCOCO1-214ENST00000549613 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
CALCOCO1-214ENST00000549613 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
CALCOCO1-214ENST00000549613 NYXQ9GZU5 481 aa16.84■□□□□ 0.29
CALCOCO1-214ENST00000549613 IL1RAPL2Q9NP60 686 aa16.84■□□□□ 0.29
CALCOCO1-214ENST00000549613 STAP2Q9UGK3 403 aa16.84■□□□□ 0.29
CALCOCO1-214ENST00000549613 EIF5BO60841 1220 aaKnown RBP16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 CIAO1O76071 339 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 MX1P20591 662 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 PDE1AP54750 535 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 CTSWP56202 376 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 AOX1Q06278 1338 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 IFIT5Q13325 482 aaKnown RBP16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 PROM2Q8N271 834 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 TTLL11Q8NHH1 800 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.28
CALCOCO1-214ENST00000549613 SASH1O94885 1247 aa16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 NTSR2O95665 410 aa16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 IL15P40933 162 aaPredicted RBP16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 SIL1Q9H173 461 aa16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 SRP68Q9UHB9 627 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms