RNA–Protein interactions for RNA: ENST00000548118.6

ATF7-204, Transcript of activating transcription factor 7, humanhuman

TSL 1 (best) BASIC

Gene ATF7, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7-204ENST00000548118 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
ATF7-204ENST00000548118 GCC1Q96CN9 775 aa20.28■□□□□ 0.84
ATF7-204ENST00000548118 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
ATF7-204ENST00000548118 SAGE1Q9NXZ1 904 aa20.28■□□□□ 0.84
ATF7-204ENST00000548118 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
ATF7-204ENST00000548118 LARGE2Q8N3Y3 721 aa20.27■□□□□ 0.84
ATF7-204ENST00000548118 GTF2E1P29083 439 aaPredicted RBP20.26■□□□□ 0.83
ATF7-204ENST00000548118 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
ATF7-204ENST00000548118 ZC3H15Q8WU90 426 aaKnown RBP20.25■□□□□ 0.83
ATF7-204ENST00000548118 GPRC5DQ9NZD1 345 aa20.25■□□□□ 0.83
ATF7-204ENST00000548118 NIP7Q9Y221 180 aaKnown RBP eCLIP20.25■□□□□ 0.83
ATF7-204ENST00000548118 SNED1Q8TER0 1413 aa20.25■□□□□ 0.83
ATF7-204ENST00000548118 HMOX1P09601 288 aa20.24■□□□□ 0.83
ATF7-204ENST00000548118 NBPF15Q8N660 670 aa20.24■□□□□ 0.83
ATF7-204ENST00000548118 VPS33BQ9H267 617 aa20.23■□□□□ 0.83
ATF7-204ENST00000548118 PANK3Q9H999 370 aa20.23■□□□□ 0.83
ATF7-204ENST00000548118 PGAP2Q9UHJ9 254 aa20.23■□□□□ 0.83
ATF7-204ENST00000548118 CRY2Q49AN0 593 aa20.22■□□□□ 0.83
ATF7-204ENST00000548118 CDC37L1Q7L3B6 337 aa20.22■□□□□ 0.83
ATF7-204ENST00000548118 CDHR2Q9BYE9 1310 aa20.22■□□□□ 0.83
ATF7-204ENST00000548118 GNAT3A8MTJ3 354 aa20.21■□□□□ 0.83
ATF7-204ENST00000548118 GLIS2Q9BZE0 524 aaPredicted RBP20.21■□□□□ 0.83
ATF7-204ENST00000548118 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
ATF7-204ENST00000548118 ZNF408Q9H9D4 720 aa20.21■□□□□ 0.83
ATF7-204ENST00000548118 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
ATF7-204ENST00000548118 NYXQ9GZU5 481 aa20.2■□□□□ 0.82
ATF7-204ENST00000548118 HUNKP57058 714 aa20.19■□□□□ 0.82
ATF7-204ENST00000548118 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
ATF7-204ENST00000548118 CCDC102AQ96A19 550 aa20.19■□□□□ 0.82
ATF7-204ENST00000548118 COL4A5P29400 1685 aa20.19■□□□□ 0.82
ATF7-204ENST00000548118 CTU1Q7Z7A3 348 aaKnown RBP20.18■□□□□ 0.82
ATF7-204ENST00000548118 FAM177BA6PVY3 158 aa20.17■□□□□ 0.82
ATF7-204ENST00000548118 PPIP5K2O43314 1243 aa20.17■□□□□ 0.82
ATF7-204ENST00000548118 HOXA10P31260 410 aaPredicted RBP20.17■□□□□ 0.82
ATF7-204ENST00000548118 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
ATF7-204ENST00000548118 ZNRF3Q9ULT6 936 aa20.17■□□□□ 0.82
ATF7-204ENST00000548118 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
ATF7-204ENST00000548118 KIF7Q2M1P5 1343 aa20.17■□□□□ 0.82
ATF7-204ENST00000548118 BTBD11A6QL63 1104 aa20.16■□□□□ 0.82
ATF7-204ENST00000548118 PKN2Q16513 984 aaKnown RBP20.16■□□□□ 0.82
ATF7-204ENST00000548118 RGMBQ6NW40 437 aa20.16■□□□□ 0.82
ATF7-204ENST00000548118 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
ATF7-204ENST00000548118 DIAPH1O60610 1272 aaKnown RBP20.15■□□□□ 0.82
ATF7-204ENST00000548118 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
ATF7-204ENST00000548118 SUPT20HQ8NEM7 779 aa20.15■□□□□ 0.82
ATF7-204ENST00000548118 USP16Q9Y5T5 823 aa20.15■□□□□ 0.82
ATF7-204ENST00000548118 SIPA1L3O60292 1781 aaPredicted RBP20.15■□□□□ 0.82
ATF7-204ENST00000548118 GMPSP49915 693 aaPredicted RBP20.14■□□□□ 0.81
ATF7-204ENST00000548118 CXCL9Q07325 125 aa20.14■□□□□ 0.81
ATF7-204ENST00000548118 REM2Q8IYK8 340 aaPredicted RBP20.14■□□□□ 0.81
ATF7-204ENST00000548118 RBM17Q96I25 401 aaKnown RBP20.14■□□□□ 0.81
ATF7-204ENST00000548118 CRAMP1Q96RY5 1269 aa20.14■□□□□ 0.81
ATF7-204ENST00000548118 ZIC5Q96T25 663 aa20.14■□□□□ 0.81
ATF7-204ENST00000548118 PPEF1O14829 653 aaPredicted RBP20.13■□□□□ 0.81
ATF7-204ENST00000548118 TRPA1O75762 1119 aa20.13■□□□□ 0.81
ATF7-204ENST00000548118 TNIP1Q15025 636 aa20.13■□□□□ 0.81
ATF7-204ENST00000548118 BCL2L13Q9BXK5 485 aa20.13■□□□□ 0.81
ATF7-204ENST00000548118 RNF186Q9NXI6 227 aa20.13■□□□□ 0.81
ATF7-204ENST00000548118 RIC1Q4ADV7 1423 aa20.12■□□□□ 0.81
ATF7-204ENST00000548118 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
ATF7-204ENST00000548118 C2orf69Q8N8R5 385 aa20.12■□□□□ 0.81
ATF7-204ENST00000548118 CEMIPQ8WUJ3 1361 aa20.11■□□□□ 0.81
ATF7-204ENST00000548118 FAM155AB1AL88 458 aaPredicted RBP20.11■□□□□ 0.81
ATF7-204ENST00000548118 H7C1D1 291 aa20.11■□□□□ 0.81
ATF7-204ENST00000548118 KIF23Q02241 960 aaPredicted RBP20.11■□□□□ 0.81
ATF7-204ENST00000548118 AOC3Q16853 763 aa20.11■□□□□ 0.81
ATF7-204ENST00000548118 HPS5Q9UPZ3 1129 aa20.11■□□□□ 0.81
ATF7-204ENST00000548118 ZNF157P51786 506 aaPredicted RBP20.09■□□□□ 0.81
ATF7-204ENST00000548118 HIRAP54198 1017 aaPredicted RBP20.09■□□□□ 0.81
ATF7-204ENST00000548118 GBA2Q9HCG7 927 aaPredicted RBP20.09■□□□□ 0.81
ATF7-204ENST00000548118 AKAP11Q9UKA4 1901 aa20.09■□□□□ 0.81
ATF7-204ENST00000548118 ABCC12Q96J65 1359 aa20.08■□□□□ 0.81
ATF7-204ENST00000548118 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.81
ATF7-204ENST00000548118 KCNQ3O43525 872 aa20.08■□□□□ 0.81
ATF7-204ENST00000548118 USP48Q86UV5 1035 aa20.08■□□□□ 0.81
ATF7-204ENST00000548118 NUTM1Q86Y26 1132 aa20.08■□□□□ 0.81
ATF7-204ENST00000548118 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
ATF7-204ENST00000548118 ERVV-1B6SEH8 477 aa20.07■□□□□ 0.8
ATF7-204ENST00000548118 HLFQ16534 295 aa20.07■□□□□ 0.8
ATF7-204ENST00000548118 HABP4Q5JVS0 413 aaKnown RBP20.07■□□□□ 0.8
ATF7-204ENST00000548118 RTFDC1Q9BY42 306 aaPredicted RBP20.07■□□□□ 0.8
ATF7-204ENST00000548118 CNOT7Q9UIV1 285 aaKnown RBP20.07■□□□□ 0.8
ATF7-204ENST00000548118 TIMELESSQ9UNS1 1208 aa20.07■□□□□ 0.8
ATF7-204ENST00000548118 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
ATF7-204ENST00000548118 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
ATF7-204ENST00000548118 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
ATF7-204ENST00000548118 KRT26Q7Z3Y9 468 aa20.06■□□□□ 0.8
ATF7-204ENST00000548118 TRPM4Q8TD43 1214 aa20.06■□□□□ 0.8
ATF7-204ENST00000548118 HDAC9Q9UKV0 1011 aa20.06■□□□□ 0.8
ATF7-204ENST00000548118 PRAMEF22A3QJZ6 481 aa20.04■□□□□ 0.8
ATF7-204ENST00000548118 SLC10A3P09131 477 aa20.04■□□□□ 0.8
ATF7-204ENST00000548118 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
ATF7-204ENST00000548118 DPP8Q6V1X1 898 aaPredicted RBP20.04■□□□□ 0.8
ATF7-204ENST00000548118 CSRNP1Q96S65 589 aa20.04■□□□□ 0.8
ATF7-204ENST00000548118 RAD17O75943 681 aa20.03■□□□□ 0.8
ATF7-204ENST00000548118 DPF2Q92785 391 aa20.03■□□□□ 0.8
ATF7-204ENST00000548118 DCPSQ96C86 337 aaKnown RBP20.03■□□□□ 0.8
ATF7-204ENST00000548118 NLRP3Q96P20 1036 aa20.03■□□□□ 0.8
ATF7-204ENST00000548118 U2SURPO15042 1029 aaKnown RBP20.02■□□□□ 0.8
ATF7-204ENST00000548118 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms