RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 ALDH1B1P30837 517 aa19.82■□□□□ 0.76
SSH1-204ENST00000546697 CCDC30Q5VVM6 783 aa19.82■□□□□ 0.76
SSH1-204ENST00000546697 NUTM1Q86Y26 1132 aa19.82■□□□□ 0.76
SSH1-204ENST00000546697 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
SSH1-204ENST00000546697 CCER2I3L3R5 266 aa19.81■□□□□ 0.76
SSH1-204ENST00000546697 AIMP1Q12904 312 aaKnown RBP19.81■□□□□ 0.76
SSH1-204ENST00000546697 TSR2Q969E8 191 aaKnown RBP19.81■□□□□ 0.76
SSH1-204ENST00000546697 DICER1Q9UPY3 1922 aaKnown RBP19.8■□□□□ 0.76
SSH1-204ENST00000546697 FANCIQ9NVI1 1328 aa19.8■□□□□ 0.76
SSH1-204ENST00000546697 GTF2E1P29083 439 aaPredicted RBP19.8■□□□□ 0.76
SSH1-204ENST00000546697 CRAMP1Q96RY5 1269 aa19.8■□□□□ 0.76
SSH1-204ENST00000546697 C21orf2O43822 256 aa19.79■□□□□ 0.76
SSH1-204ENST00000546697 RASSF7Q02833 373 aa19.79■□□□□ 0.76
SSH1-204ENST00000546697 GPBP1L1Q9HC44 474 aaPredicted RBP19.79■□□□□ 0.76
SSH1-204ENST00000546697 CACNA1FO60840 1977 aa19.78■□□□□ 0.76
SSH1-204ENST00000546697 FAM177BA6PVY3 158 aa19.78■□□□□ 0.76
SSH1-204ENST00000546697 ELL2O00472 640 aaPredicted RBP19.78■□□□□ 0.76
SSH1-204ENST00000546697 TWISTNBQ3B726 338 aaPredicted RBP19.78■□□□□ 0.76
SSH1-204ENST00000546697 GRIPAP1Q4V328 841 aa19.78■□□□□ 0.76
SSH1-204ENST00000546697 CC2D2BQ6DHV5 1058 aa19.78■□□□□ 0.76
SSH1-204ENST00000546697 FAM9BQ8IZU0 186 aa19.78■□□□□ 0.76
SSH1-204ENST00000546697 PHAXQ9H814 394 aaKnown RBP19.78■□□□□ 0.76
SSH1-204ENST00000546697 RNF181Q9P0P0 153 aa19.78■□□□□ 0.76
SSH1-204ENST00000546697 SH3TC1Q8TE82 1336 aa19.77■□□□□ 0.76
SSH1-204ENST00000546697 CACNA1SQ13698 1873 aa19.77■□□□□ 0.76
SSH1-204ENST00000546697 NLRP3Q96P20 1036 aa19.77■□□□□ 0.76
SSH1-204ENST00000546697 LAMB2P55268 1798 aa19.77■□□□□ 0.76
SSH1-204ENST00000546697 KIF3CO14782 793 aa19.76■□□□□ 0.75
SSH1-204ENST00000546697 VAMP4O75379 141 aa19.76■□□□□ 0.75
SSH1-204ENST00000546697 C1QTNF8P60827 252 aa19.76■□□□□ 0.75
SSH1-204ENST00000546697 CCDC93Q567U6 631 aa19.76■□□□□ 0.75
SSH1-204ENST00000546697 C3orf67Q6ZVT6 689 aa19.76■□□□□ 0.75
SSH1-204ENST00000546697 TAOK3Q9H2K8 898 aa19.76■□□□□ 0.75
SSH1-204ENST00000546697 SPINK5Q9NQ38 1064 aaPredicted RBP19.76■□□□□ 0.75
SSH1-204ENST00000546697 TIAM2Q8IVF5 1701 aa19.76■□□□□ 0.75
SSH1-204ENST00000546697 DDX60Q8IY21 1712 aaKnown RBP19.76■□□□□ 0.75
SSH1-204ENST00000546697 GOLGA2Q08379 1002 aa19.75■□□□□ 0.75
SSH1-204ENST00000546697 RTKN2Q8IZC4 609 aa19.75■□□□□ 0.75
SSH1-204ENST00000546697 CCDC88AQ3V6T2 1871 aa19.74■□□□□ 0.75
SSH1-204ENST00000546697 PSMD1Q99460 953 aa19.74■□□□□ 0.75
SSH1-204ENST00000546697 TRMT112Q9UI30 125 aaKnown RBP19.74■□□□□ 0.75
SSH1-204ENST00000546697 DDX58O95786 925 aaKnown RBP19.73■□□□□ 0.75
SSH1-204ENST00000546697 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
SSH1-204ENST00000546697 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
SSH1-204ENST00000546697 KSR2Q6VAB6 950 aa19.73■□□□□ 0.75
SSH1-204ENST00000546697 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
SSH1-204ENST00000546697 RPGRQ92834 1020 aaKnown RBP19.73■□□□□ 0.75
SSH1-204ENST00000546697 RBM17Q96I25 401 aaKnown RBP19.73■□□□□ 0.75
SSH1-204ENST00000546697 METTL22Q9BUU2 404 aaPredicted RBP19.73■□□□□ 0.75
SSH1-204ENST00000546697 MYH16Q9H6N6 1097 aa19.73■□□□□ 0.75
SSH1-204ENST00000546697 GLTPD2A6NH11 291 aa19.72■□□□□ 0.75
SSH1-204ENST00000546697 RIC3Q7Z5B4 369 aa19.72■□□□□ 0.75
SSH1-204ENST00000546697 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
SSH1-204ENST00000546697 KDM2BQ8NHM5 1336 aa19.72■□□□□ 0.75
SSH1-204ENST00000546697 SYNE4Q8N205 404 aa19.71■□□□□ 0.75
SSH1-204ENST00000546697 ZBTB38Q8NAP3 1195 aaPredicted RBP19.71■□□□□ 0.75
SSH1-204ENST00000546697 WDR90Q96KV7 1748 aa19.71■□□□□ 0.75
SSH1-204ENST00000546697 BBOX1O75936 387 aa19.7■□□□□ 0.74
SSH1-204ENST00000546697 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
SSH1-204ENST00000546697 LRRC37AA6NMS7 1700 aa19.7■□□□□ 0.74
SSH1-204ENST00000546697 ABCC4O15439 1325 aa19.7■□□□□ 0.74
SSH1-204ENST00000546697 SENP3-EIF4A1A0A087X0R7 540 aa19.69■□□□□ 0.74
SSH1-204ENST00000546697 ATP5J2-PTCD1G3V325 749 aa19.69■□□□□ 0.74
SSH1-204ENST00000546697 SLC4A2P04920 1241 aa19.69■□□□□ 0.74
SSH1-204ENST00000546697 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
SSH1-204ENST00000546697 HCLS1P14317 486 aaPredicted RBP19.69■□□□□ 0.74
SSH1-204ENST00000546697 TMC4Q7Z404 712 aa19.69■□□□□ 0.74
SSH1-204ENST00000546697 VPS33BQ9H267 617 aa19.69■□□□□ 0.74
SSH1-204ENST00000546697 ATP6V0A2Q9Y487 856 aa19.69■□□□□ 0.74
SSH1-204ENST00000546697 PI4KAP2A4QPH2 592 aa19.68■□□□□ 0.74
SSH1-204ENST00000546697 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
SSH1-204ENST00000546697 HSP90B1P14625 803 aaKnown RBP19.68■□□□□ 0.74
SSH1-204ENST00000546697 PI4KAP1Q8N8J0 262 aa19.68■□□□□ 0.74
SSH1-204ENST00000546697 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
SSH1-204ENST00000546697 RTFDC1Q9BY42 306 aaPredicted RBP19.68■□□□□ 0.74
SSH1-204ENST00000546697 CDHR2Q9BYE9 1310 aa19.68■□□□□ 0.74
SSH1-204ENST00000546697 PPEF1O14829 653 aaPredicted RBP19.67■□□□□ 0.74
SSH1-204ENST00000546697 FLIIQ13045 1269 aa19.67■□□□□ 0.74
SSH1-204ENST00000546697 OLFM4Q6UX06 510 aa19.67■□□□□ 0.74
SSH1-204ENST00000546697 G2E3Q7L622 706 aa19.67■□□□□ 0.74
SSH1-204ENST00000546697 ZNF526Q8TF50 670 aaPredicted RBP19.67■□□□□ 0.74
SSH1-204ENST00000546697 NMRK2Q9NPI5 230 aa19.67■□□□□ 0.74
SSH1-204ENST00000546697 ZNF219Q9P2Y4 722 aaPredicted RBP19.67■□□□□ 0.74
SSH1-204ENST00000546697 MAP3K2Q9Y2U5 619 aa19.67■□□□□ 0.74
SSH1-204ENST00000546697 SALL2Q9Y467 1007 aaPredicted RBP19.67■□□□□ 0.74
SSH1-204ENST00000546697 CEP350Q5VT06 3117 aa19.66■□□□□ 0.74
SSH1-204ENST00000546697 TOMM70O94826 608 aa19.66■□□□□ 0.74
SSH1-204ENST00000546697 GRAPQ13588 217 aa19.66■□□□□ 0.74
SSH1-204ENST00000546697 SP8Q8IXZ3 490 aa19.66■□□□□ 0.74
SSH1-204ENST00000546697 TRMT2AQ8IZ69 625 aaKnown RBP19.66■□□□□ 0.74
SSH1-204ENST00000546697 GRAPLQ8TC17 118 aaPredicted RBP19.66■□□□□ 0.74
SSH1-204ENST00000546697 MYD88Q99836 296 aa19.66■□□□□ 0.74
SSH1-204ENST00000546697 CWC25Q9NXE8 425 aaPredicted RBP19.66■□□□□ 0.74
SSH1-204ENST00000546697 E9PSI1 815 aa19.65■□□□□ 0.74
SSH1-204ENST00000546697 FZD9O00144 591 aa19.65■□□□□ 0.74
SSH1-204ENST00000546697 IRS4O14654 1257 aaPredicted RBP19.65■□□□□ 0.74
SSH1-204ENST00000546697 POTECB2RU33 542 aa19.64■□□□□ 0.73
SSH1-204ENST00000546697 IARSP41252 1262 aaKnown RBP19.64■□□□□ 0.73
SSH1-204ENST00000546697 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
SSH1-204ENST00000546697 ZNF428Q96B54 188 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms