RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 DACH1Q9UI36 760 aa10.59□□□□□ -0.71
LEMD3-206ENST00000545026 USP20Q9Y2K6 914 aa10.59□□□□□ -0.71
LEMD3-206ENST00000545026 RTCBQ9Y3I0 505 aaKnown RBP10.59□□□□□ -0.71
LEMD3-206ENST00000545026 A6NHS1 94 aa10.58□□□□□ -0.72
LEMD3-206ENST00000545026 MAN1A2O60476 641 aa10.58□□□□□ -0.72
LEMD3-206ENST00000545026 GRNP28799 593 aaKnown RBP10.58□□□□□ -0.72
LEMD3-206ENST00000545026 TYRO3Q06418 890 aa10.58□□□□□ -0.72
LEMD3-206ENST00000545026 C8orf34Q49A92 452 aa10.58□□□□□ -0.72
LEMD3-206ENST00000545026 GAS2L1Q99501 681 aaPredicted RBP10.58□□□□□ -0.72
LEMD3-206ENST00000545026 LDHBP07195 334 aaKnown RBP10.57□□□□□ -0.72
LEMD3-206ENST00000545026 NLRP8Q86W28 1048 aa10.57□□□□□ -0.72
LEMD3-206ENST00000545026 KCNMB2Q9Y691 235 aa10.57□□□□□ -0.72
LEMD3-206ENST00000545026 GJA3Q9Y6H8 435 aa10.57□□□□□ -0.72
LEMD3-206ENST00000545026 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
LEMD3-206ENST00000545026 TRIP4Q15650 581 aaPredicted RBP10.56□□□□□ -0.72
LEMD3-206ENST00000545026 ENOX2Q16206 610 aaKnown RBP10.56□□□□□ -0.72
LEMD3-206ENST00000545026 SAMD5Q5TGI4 173 aa10.56□□□□□ -0.72
LEMD3-206ENST00000545026 PGBD3Q8N328 593 aa10.56□□□□□ -0.72
LEMD3-206ENST00000545026 TTC16Q8NEE8 873 aa10.56□□□□□ -0.72
LEMD3-206ENST00000545026 CEP63Q96MT8 703 aa10.56□□□□□ -0.72
LEMD3-206ENST00000545026 WWC3Q9ULE0 1092 aa10.56□□□□□ -0.72
LEMD3-206ENST00000545026 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
LEMD3-206ENST00000545026 VAMP1P23763 118 aa10.55□□□□□ -0.72
LEMD3-206ENST00000545026 XKR5Q6UX68 686 aa10.55□□□□□ -0.72
LEMD3-206ENST00000545026 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
LEMD3-206ENST00000545026 SETDB2Q96T68 719 aa10.55□□□□□ -0.72
LEMD3-206ENST00000545026 IGSF5Q9NSI5 407 aa10.55□□□□□ -0.72
LEMD3-206ENST00000545026 ORC1Q13415 861 aa10.54□□□□□ -0.72
LEMD3-206ENST00000545026 FNDC3AQ9Y2H6 1198 aaKnown RBP10.54□□□□□ -0.72
LEMD3-206ENST00000545026 PNMA6FA0A0J9YX94 578 aa10.53□□□□□ -0.72
LEMD3-206ENST00000545026 THBS1P07996 1170 aa10.53□□□□□ -0.72
LEMD3-206ENST00000545026 PTSQ03393 145 aa10.53□□□□□ -0.72
LEMD3-206ENST00000545026 CSRNP1Q96S65 589 aa10.53□□□□□ -0.72
LEMD3-206ENST00000545026 ZCCHC2Q9C0B9 1178 aaKnown RBP10.53□□□□□ -0.72
LEMD3-206ENST00000545026 SLC35F4A4IF30 521 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 UBAP1LF5GYI3 381 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 EIF1AYO14602 144 aaKnown RBP10.52□□□□□ -0.73
LEMD3-206ENST00000545026 EPB42P16452 691 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 FGD1P98174 961 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 LBRQ14739 615 aaKnown RBP10.52□□□□□ -0.73
LEMD3-206ENST00000545026 EFHC2Q5JST6 749 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 PDE12Q6L8Q7 609 aaKnown RBP10.52□□□□□ -0.73
LEMD3-206ENST00000545026 DUSP9Q99956 384 aaKnown RBP10.52□□□□□ -0.73
LEMD3-206ENST00000545026 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 RNF19AQ9NV58 838 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 PARP2Q9UGN5 583 aa10.52□□□□□ -0.73
LEMD3-206ENST00000545026 TNFRSF21O75509 655 aa10.51□□□□□ -0.73
LEMD3-206ENST00000545026 NEFLP07196 543 aa10.51□□□□□ -0.73
LEMD3-206ENST00000545026 ATP2B2Q01814 1243 aa10.51□□□□□ -0.73
LEMD3-206ENST00000545026 MRPL58Q14197 206 aaKnown RBP10.51□□□□□ -0.73
LEMD3-206ENST00000545026 DNAJC25Q9H1X3 360 aa10.51□□□□□ -0.73
LEMD3-206ENST00000545026 BRD7Q9NPI1 651 aa10.51□□□□□ -0.73
LEMD3-206ENST00000545026 C11orf16Q9NQ32 467 aa10.51□□□□□ -0.73
LEMD3-206ENST00000545026 EGFRP00533 1210 aa10.5□□□□□ -0.73
LEMD3-206ENST00000545026 KCNQ4P56696 695 aa10.5□□□□□ -0.73
LEMD3-206ENST00000545026 UBAP2LQ14157 1087 aaKnown RBP10.5□□□□□ -0.73
LEMD3-206ENST00000545026 ALG1LQ6GMV1 187 aa10.5□□□□□ -0.73
LEMD3-206ENST00000545026 RIPOR1Q6ZS17 1223 aa10.5□□□□□ -0.73
LEMD3-206ENST00000545026 ZNF438Q7Z4V0 828 aa10.5□□□□□ -0.73
LEMD3-206ENST00000545026 ELP3Q9H9T3 547 aa10.5□□□□□ -0.73
LEMD3-206ENST00000545026 FOXD3Q9UJU5 478 aaPredicted RBP10.5□□□□□ -0.73
LEMD3-206ENST00000545026 XYLBO75191 536 aa10.49□□□□□ -0.73
LEMD3-206ENST00000545026 FAM157BP0CG42 384 aa10.49□□□□□ -0.73
LEMD3-206ENST00000545026 SENP2Q9HC62 589 aa10.49□□□□□ -0.73
LEMD3-206ENST00000545026 ATXN7O15265 892 aaPredicted RBP10.48□□□□□ -0.73
LEMD3-206ENST00000545026 EFSO43281 561 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 CPNE3O75131 537 aaKnown RBP10.48□□□□□ -0.73
LEMD3-206ENST00000545026 RECKO95980 971 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 XPCQ01831 940 aaPredicted RBP10.48□□□□□ -0.73
LEMD3-206ENST00000545026 FIGNL1Q6PIW4 674 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 TMC4Q7Z404 712 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 FBF1Q8TES7 1133 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 KIFC2Q96AC6 838 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 FAM161BQ96MY7 647 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 CUEDC1Q9NWM3 386 aaPredicted RBP10.48□□□□□ -0.73
LEMD3-206ENST00000545026 TMEM63CQ9P1W3 806 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 PCDHGC4Q9Y5F7 938 aa10.48□□□□□ -0.73
LEMD3-206ENST00000545026 DAB2P98082 770 aa10.47□□□□□ -0.73
LEMD3-206ENST00000545026 DBN1Q16643 649 aa10.47□□□□□ -0.73
LEMD3-206ENST00000545026 CCDC155Q8N6L0 562 aa10.47□□□□□ -0.73
LEMD3-206ENST00000545026 SNX29Q8TEQ0 813 aa10.47□□□□□ -0.73
LEMD3-206ENST00000545026 TRIM47Q96LD4 638 aa10.47□□□□□ -0.73
LEMD3-206ENST00000545026 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
LEMD3-206ENST00000545026 NUCKS1Q9H1E3 243 aaKnown RBP10.47□□□□□ -0.73
LEMD3-206ENST00000545026 KCNH4Q9UQ05 1017 aa10.47□□□□□ -0.73
LEMD3-206ENST00000545026 TNP2Q05952 138 aa10.46□□□□□ -0.73
LEMD3-206ENST00000545026 SFSWAPQ12872 951 aaKnown RBP10.46□□□□□ -0.73
LEMD3-206ENST00000545026 USPL1Q5W0Q7 1092 aa10.46□□□□□ -0.73
LEMD3-206ENST00000545026 ZFYVE28Q9HCC9 887 aa10.46□□□□□ -0.73
LEMD3-206ENST00000545026 HCN2Q9UL51 889 aa10.46□□□□□ -0.73
LEMD3-206ENST00000545026 H7C1W4 665 aa10.45□□□□□ -0.74
LEMD3-206ENST00000545026 NLRP13Q86W25 1043 aa10.45□□□□□ -0.74
LEMD3-206ENST00000545026 TRIM22Q8IYM9 498 aa10.45□□□□□ -0.74
LEMD3-206ENST00000545026 IRX2Q9BZI1 471 aaPredicted RBP10.45□□□□□ -0.74
LEMD3-206ENST00000545026 NDFIP2Q9NV92 336 aa10.45□□□□□ -0.74
LEMD3-206ENST00000545026 GMPR2Q9P2T1 348 aaKnown RBP10.45□□□□□ -0.74
LEMD3-206ENST00000545026 DCDC2BA2VCK2 349 aa10.44□□□□□ -0.74
LEMD3-206ENST00000545026 PHACTR2O75167 634 aa10.44□□□□□ -0.74
LEMD3-206ENST00000545026 PSMD2Q13200 908 aa10.44□□□□□ -0.74
LEMD3-206ENST00000545026 LDLRAD1Q5T700 205 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms