RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
XRCC1-202ENST00000543982 TBC1D9BQ66K14 1250 aa19.97■□□□□ 0.79
XRCC1-202ENST00000543982 CENPQQ7L2Z9 268 aaPredicted RBP19.97■□□□□ 0.79
XRCC1-202ENST00000543982 RPAP2Q8IXW5 612 aaPredicted RBP19.97■□□□□ 0.79
XRCC1-202ENST00000543982 BICC1Q9H694 974 aaKnown RBP19.97■□□□□ 0.79
XRCC1-202ENST00000543982 FAM177BA6PVY3 158 aa19.96■□□□□ 0.79
XRCC1-202ENST00000543982 PPP1R42Q7Z4L9 355 aa19.95■□□□□ 0.78
XRCC1-202ENST00000543982 HSP90AB3PQ58FF7 597 aa19.95■□□□□ 0.78
XRCC1-202ENST00000543982 BICDL1Q6ZP65 573 aa19.95■□□□□ 0.78
XRCC1-202ENST00000543982 NIP7Q9Y221 180 aaKnown RBP eCLIP19.95■□□□□ 0.78
XRCC1-202ENST00000543982 USP42Q9H9J4 1324 aaKnown RBP19.95■□□□□ 0.78
XRCC1-202ENST00000543982 RFC4P35249 363 aa19.94■□□□□ 0.78
XRCC1-202ENST00000543982 FOXO4P98177 505 aa19.94■□□□□ 0.78
XRCC1-202ENST00000543982 ZPR1O75312 459 aa19.94■□□□□ 0.78
XRCC1-202ENST00000543982 CLEC4GQ6UXB4 293 aa19.94■□□□□ 0.78
XRCC1-202ENST00000543982 COL23A1Q86Y22 540 aaPredicted RBP19.94■□□□□ 0.78
XRCC1-202ENST00000543982 TFCP2L1Q9NZI6 479 aa19.94■□□□□ 0.78
XRCC1-202ENST00000543982 NUP98P52948 1817 aa19.93■□□□□ 0.78
XRCC1-202ENST00000543982 PCCAP05165 728 aaPredicted RBP19.93■□□□□ 0.78
XRCC1-202ENST00000543982 SMC5Q8IY18 1101 aa19.93■□□□□ 0.78
XRCC1-202ENST00000543982 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
XRCC1-202ENST00000543982 SSFA2P28290 1259 aa19.92■□□□□ 0.78
XRCC1-202ENST00000543982 POLA2Q14181 598 aa19.92■□□□□ 0.78
XRCC1-202ENST00000543982 TRMT112Q9UI30 125 aaKnown RBP19.92■□□□□ 0.78
XRCC1-202ENST00000543982 ADRA2BP18089 450 aa19.92■□□□□ 0.78
XRCC1-202ENST00000543982 SSH3Q8TE77 659 aa19.92■□□□□ 0.78
XRCC1-202ENST00000543982 DCTPP1Q9H773 170 aa19.92■□□□□ 0.78
XRCC1-202ENST00000543982 UBR3Q6ZT12 1888 aa19.91■□□□□ 0.78
XRCC1-202ENST00000543982 AFDNP55196 1824 aaKnown RBP19.91■□□□□ 0.78
XRCC1-202ENST00000543982 SRGAP3O43295 1099 aa19.91■□□□□ 0.78
XRCC1-202ENST00000543982 GYS1P13807 737 aa19.91■□□□□ 0.78
XRCC1-202ENST00000543982 BAG6P46379 1132 aa19.91■□□□□ 0.78
XRCC1-202ENST00000543982 SF3B2Q13435 895 aaKnown RBP19.91■□□□□ 0.78
XRCC1-202ENST00000543982 MTX1Q13505 466 aa19.91■□□□□ 0.78
XRCC1-202ENST00000543982 PDZRN3Q9UPQ7 1066 aa19.91■□□□□ 0.78
XRCC1-202ENST00000543982 NTSR2O95665 410 aa19.9■□□□□ 0.78
XRCC1-202ENST00000543982 NUTM1Q86Y26 1132 aa19.9■□□□□ 0.78
XRCC1-202ENST00000543982 PNPLA7Q6ZV29 1317 aa19.9■□□□□ 0.78
XRCC1-202ENST00000543982 RABL6Q3YEC7 729 aaPredicted RBP19.9■□□□□ 0.78
XRCC1-202ENST00000543982 LMBR1LQ6UX01 489 aa19.9■□□□□ 0.78
XRCC1-202ENST00000543982 KLHDC4Q8TBB5 520 aa19.9■□□□□ 0.78
XRCC1-202ENST00000543982 PA2G4Q9UQ80 394 aaKnown RBP19.9■□□□□ 0.78
XRCC1-202ENST00000543982 ZNF652Q9Y2D9 606 aa19.9■□□□□ 0.78
XRCC1-202ENST00000543982 EXOC6BQ9Y2D4 811 aa19.89■□□□□ 0.77
XRCC1-202ENST00000543982 BCORQ6W2J9 1755 aa19.89■□□□□ 0.77
XRCC1-202ENST00000543982 HCLS1P14317 486 aaPredicted RBP19.88■□□□□ 0.77
XRCC1-202ENST00000543982 NFIXQ14938 502 aa19.88■□□□□ 0.77
XRCC1-202ENST00000543982 CCDC24Q8N4L8 307 aa19.88■□□□□ 0.77
XRCC1-202ENST00000543982 UTP14AQ9BVJ6 771 aaKnown RBP19.88■□□□□ 0.77
XRCC1-202ENST00000543982 PDGFDQ9GZP0 370 aaPredicted RBP19.88■□□□□ 0.77
XRCC1-202ENST00000543982 C4AP0C0L4 1744 aa19.88■□□□□ 0.77
XRCC1-202ENST00000543982 APBB1O00213 710 aa19.88■□□□□ 0.77
XRCC1-202ENST00000543982 IRS4O14654 1257 aaPredicted RBP19.88■□□□□ 0.77
XRCC1-202ENST00000543982 RFX5P48382 616 aaPredicted RBP19.88■□□□□ 0.77
XRCC1-202ENST00000543982 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
XRCC1-202ENST00000543982 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
XRCC1-202ENST00000543982 SLC15A2Q16348 729 aa19.87■□□□□ 0.77
XRCC1-202ENST00000543982 PARP10Q53GL7 1025 aa19.87■□□□□ 0.77
XRCC1-202ENST00000543982 RGPD3A6NKT7 1758 aaPredicted RBP19.87■□□□□ 0.77
XRCC1-202ENST00000543982 RGPD4Q7Z3J3 1758 aa19.87■□□□□ 0.77
XRCC1-202ENST00000543982 RGL2O15211 777 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 ERFEQ4G0M1 354 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 CDHR2Q9BYE9 1310 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
XRCC1-202ENST00000543982 PDE4AP27815 886 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 NUCB1Q02818 461 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 UPF1Q92900 1129 aaKnown RBP eCLIP19.86■□□□□ 0.77
XRCC1-202ENST00000543982 SETDB2Q96T68 719 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 PLA2G12BQ9BX93 195 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 ANKRD36CQ5JPF3 1778 aa19.86■□□□□ 0.77
XRCC1-202ENST00000543982 MSH5O43196 834 aa19.85■□□□□ 0.77
XRCC1-202ENST00000543982 HMMRO75330 724 aa19.85■□□□□ 0.77
XRCC1-202ENST00000543982 TM4SF1P30408 202 aa19.85■□□□□ 0.77
XRCC1-202ENST00000543982 ANKRD45Q5TZF3 282 aa19.85■□□□□ 0.77
XRCC1-202ENST00000543982 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.85■□□□□ 0.77
XRCC1-202ENST00000543982 SH3TC1Q8TE82 1336 aa19.85■□□□□ 0.77
XRCC1-202ENST00000543982 GCC1Q96CN9 775 aa19.84■□□□□ 0.77
XRCC1-202ENST00000543982 HDAC5Q9UQL6 1122 aa19.84■□□□□ 0.77
XRCC1-202ENST00000543982 SURF6O75683 361 aaKnown RBP19.84■□□□□ 0.77
XRCC1-202ENST00000543982 CSF1RP07333 972 aa19.84■□□□□ 0.77
XRCC1-202ENST00000543982 CCDC125Q86Z20 511 aa19.84■□□□□ 0.77
XRCC1-202ENST00000543982 C16orf71Q8IYS4 520 aaPredicted RBP19.84■□□□□ 0.77
XRCC1-202ENST00000543982 TTLL11Q8NHH1 800 aa19.84■□□□□ 0.77
XRCC1-202ENST00000543982 LNPKQ9C0E8 428 aa19.84■□□□□ 0.77
XRCC1-202ENST00000543982 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
XRCC1-202ENST00000543982 PTPN12Q05209 780 aaKnown RBP19.83■□□□□ 0.77
XRCC1-202ENST00000543982 DDR1Q08345 913 aa19.83■□□□□ 0.77
XRCC1-202ENST00000543982 TUBGCP6Q96RT7 1819 aa19.83■□□□□ 0.76
XRCC1-202ENST00000543982 ABCC12Q96J65 1359 aa19.83■□□□□ 0.76
XRCC1-202ENST00000543982 ILDR2Q71H61 639 aa19.83■□□□□ 0.76
XRCC1-202ENST00000543982 ZNF594Q96JF6 807 aaPredicted RBP19.83■□□□□ 0.76
XRCC1-202ENST00000543982 CHMP3Q9Y3E7 222 aa19.83■□□□□ 0.76
XRCC1-202ENST00000543982 FAM161AQ3B820 660 aa19.82■□□□□ 0.76
XRCC1-202ENST00000543982 MSL1Q68DK7 614 aa19.82■□□□□ 0.76
XRCC1-202ENST00000543982 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
XRCC1-202ENST00000543982 STK32BQ9NY57 414 aa19.82■□□□□ 0.76
XRCC1-202ENST00000543982 NOP58Q9Y2X3 529 aaKnown RBP19.82■□□□□ 0.76
XRCC1-202ENST00000543982 PDE8AO60658 829 aa19.81■□□□□ 0.76
XRCC1-202ENST00000543982 RGS3P49796 1198 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms