RNA–Protein interactions for RNA: ENST00000541213.5

POLE-216, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 1,675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-216	ENST00000541213	PCCA	P05165	728 aa	Predicted RBP	27.83	■■■□□ 2.05
POLE-216	ENST00000541213	CASP7	P55210	303 aa		27.83	■■■□□ 2.05
POLE-216	ENST00000541213	GCC1	Q96CN9	775 aa		27.83	■■■□□ 2.05
POLE-216	ENST00000541213	EZH2	Q15910	746 aa	Known RBP	27.82	■■■□□ 2.04
POLE-216	ENST00000541213	AKT1S1	Q96B36	256 aa		27.82	■■■□□ 2.04
POLE-216	ENST00000541213	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
POLE-216	ENST00000541213	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.82	■■■□□ 2.04
POLE-216	ENST00000541213	RGPD4	Q7Z3J3	1758 aa		27.82	■■■□□ 2.04
POLE-216	ENST00000541213	MTX1	Q13505	466 aa		27.81	■■■□□ 2.04
POLE-216	ENST00000541213	SMC5	Q8IY18	1101 aa		27.81	■■■□□ 2.04
POLE-216	ENST00000541213	PPP1R42	Q7Z4L9	355 aa		27.81	■■■□□ 2.04
POLE-216	ENST00000541213	KAZALD1	Q96I82	304 aa		27.81	■■■□□ 2.04
POLE-216	ENST00000541213	TFCP2L1	Q9NZI6	479 aa		27.81	■■■□□ 2.04
POLE-216	ENST00000541213	USP42	Q9H9J4	1324 aa	Known RBP	27.8	■■■□□ 2.04
POLE-216	ENST00000541213	JARID2	Q92833	1246 aa	Predicted RBP	27.8	■■■□□ 2.04
POLE-216	ENST00000541213	BICC1	Q9H694	974 aa	Known RBP	27.8	■■■□□ 2.04
POLE-216	ENST00000541213	BCL2L12	Q9HB09	334 aa		27.8	■■■□□ 2.04
POLE-216	ENST00000541213	SRP68	Q9UHB9	627 aa	Known RBP	27.8	■■■□□ 2.04
POLE-216	ENST00000541213	TRMT112	Q9UI30	125 aa	Known RBP	27.8	■■■□□ 2.04
POLE-216	ENST00000541213	UBN2	Q6ZU65	1347 aa		27.8	■■■□□ 2.04
POLE-216	ENST00000541213	PNMA6E	A0A0J9YXQ4	647 aa		27.79	■■■□□ 2.04
POLE-216	ENST00000541213	SSH3	Q8TE77	659 aa		27.79	■■■□□ 2.04
POLE-216	ENST00000541213	DCTPP1	Q9H773	170 aa		27.79	■■■□□ 2.04
POLE-216	ENST00000541213	SRGAP3	O43295	1099 aa		27.78	■■■□□ 2.04
POLE-216	ENST00000541213	RTL5	Q5HYW3	569 aa	Predicted RBP	27.78	■■■□□ 2.04
POLE-216	ENST00000541213	FLAD1	Q8NFF5	587 aa		27.78	■■■□□ 2.04
POLE-216	ENST00000541213	AFDN	P55196	1824 aa	Known RBP	27.78	■■■□□ 2.04
POLE-216	ENST00000541213	ZNF827	Q17R98	1081 aa		27.78	■■■□□ 2.04
POLE-216	ENST00000541213	FAM89A	Q96GI7	184 aa		27.78	■■■□□ 2.04
POLE-216	ENST00000541213	UTP14A	Q9BVJ6	771 aa	Known RBP	27.78	■■■□□ 2.04
POLE-216	ENST00000541213	NUP98	P52948	1817 aa		27.77	■■■□□ 2.04
POLE-216	ENST00000541213	SUSD4	Q5VX71	490 aa		27.77	■■■□□ 2.04
POLE-216	ENST00000541213	CDHR2	Q9BYE9	1310 aa		27.77	■■■□□ 2.04
POLE-216	ENST00000541213	POLA2	Q14181	598 aa		27.76	■■■□□ 2.03
POLE-216	ENST00000541213	RABL6	Q3YEC7	729 aa	Predicted RBP	27.75	■■■□□ 2.03
POLE-216	ENST00000541213	SETDB2	Q96T68	719 aa		27.75	■■■□□ 2.03
POLE-216	ENST00000541213	EPHA10	Q5JZY3	1008 aa		27.75	■■■□□ 2.03
POLE-216	ENST00000541213	TBC1D9B	Q66K14	1250 aa		27.75	■■■□□ 2.03
POLE-216	ENST00000541213	PLA2G12B	Q9BX93	195 aa		27.75	■■■□□ 2.03
POLE-216	ENST00000541213	DEFB132	Q7Z7B7	95 aa		27.74	■■■□□ 2.03
POLE-216	ENST00000541213	BCOR	Q6W2J9	1755 aa		27.74	■■■□□ 2.03
POLE-216	ENST00000541213	ANKRD36C	Q5JPF3	1778 aa		27.73	■■■□□ 2.03
POLE-216	ENST00000541213	SH3TC1	Q8TE82	1336 aa		27.73	■■■□□ 2.03
POLE-216	ENST00000541213	HSP90B1	P14625	803 aa	Known RBP	27.73	■■■□□ 2.03
POLE-216	ENST00000541213	FOXO4	P98177	505 aa		27.73	■■■□□ 2.03
POLE-216	ENST00000541213	BICDL1	Q6ZP65	573 aa		27.73	■■■□□ 2.03
POLE-216	ENST00000541213	UBR3	Q6ZT12	1888 aa		27.72	■■■□□ 2.03
POLE-216	ENST00000541213	IRS4	O14654	1257 aa	Predicted RBP	27.72	■■■□□ 2.03
POLE-216	ENST00000541213	STK32B	Q9NY57	414 aa		27.72	■■■□□ 2.03
POLE-216	ENST00000541213	PDZRN3	Q9UPQ7	1066 aa		27.72	■■■□□ 2.03
POLE-216	ENST00000541213	SCN7A	Q01118	1682 aa		27.71	■■■□□ 2.03
POLE-216	ENST00000541213	NTSR2	O95665	410 aa		27.71	■■■□□ 2.03
POLE-216	ENST00000541213	SLC15A2	Q16348	729 aa		27.71	■■■□□ 2.03
POLE-216	ENST00000541213	LMBR1L	Q6UX01	489 aa		27.71	■■■□□ 2.03
POLE-216	ENST00000541213	PELP1	Q8IZL8	1130 aa	Known RBP	27.71	■■■□□ 2.03
POLE-216	ENST00000541213	FAM177B	A6PVY3	158 aa		27.7	■■■□□ 2.02
POLE-216	ENST00000541213	GYS1	P13807	737 aa		27.7	■■■□□ 2.02
POLE-216	ENST00000541213	NYX	Q9GZU5	481 aa		27.7	■■■□□ 2.02
POLE-216	ENST00000541213	NUCB1	Q02818	461 aa		27.69	■■■□□ 2.02
POLE-216	ENST00000541213	HSP90AB4P	Q58FF6	505 aa		27.69	■■■□□ 2.02
POLE-216	ENST00000541213	ANKRD45	Q5TZF3	282 aa		27.69	■■■□□ 2.02
POLE-216	ENST00000541213	COL23A1	Q86Y22	540 aa	Predicted RBP	27.69	■■■□□ 2.02
POLE-216	ENST00000541213	ZBTB47	Q9UFB7	747 aa	Predicted RBP	27.69	■■■□□ 2.02
POLE-216	ENST00000541213	PDE8A	O60658	829 aa		27.68	■■■□□ 2.02
POLE-216	ENST00000541213	SYNE4	Q8N205	404 aa		27.68	■■■□□ 2.02
POLE-216	ENST00000541213	MSH5	O43196	834 aa		27.68	■■■□□ 2.02
POLE-216	ENST00000541213	SURF6	O75683	361 aa	Known RBP	27.68	■■■□□ 2.02
POLE-216	ENST00000541213	TPTE2	Q6XPS3	522 aa		27.68	■■■□□ 2.02
POLE-216	ENST00000541213	NOP58	Q9Y2X3	529 aa	Known RBP	27.67	■■■□□ 2.02
POLE-216	ENST00000541213	C4A	P0C0L4	1744 aa		27.66	■■■□□ 2.02
POLE-216	ENST00000541213	RAB11FIP3	O75154	756 aa		27.66	■■■□□ 2.02
POLE-216	ENST00000541213	CSF1R	P07333	972 aa		27.66	■■■□□ 2.02
POLE-216	ENST00000541213	GTF2E1	P29083	439 aa	Predicted RBP	27.66	■■■□□ 2.02
POLE-216	ENST00000541213	CHD1L	Q86WJ1	897 aa		27.66	■■■□□ 2.02
POLE-216	ENST00000541213	EXOC6B	Q9Y2D4	811 aa		27.66	■■■□□ 2.02
POLE-216	ENST00000541213	CHMP3	Q9Y3E7	222 aa		27.66	■■■□□ 2.02
POLE-216	ENST00000541213	PNPLA7	Q6ZV29	1317 aa		27.66	■■■□□ 2.02
POLE-216	ENST00000541213	NFIX	Q14938	502 aa		27.65	■■■□□ 2.02
POLE-216	ENST00000541213	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.65	■■■□□ 2.02
POLE-216	ENST00000541213	NLGN1	Q8N2Q7	840 aa		27.65	■■■□□ 2.02
POLE-216	ENST00000541213	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.65	■■■□□ 2.02
POLE-216	ENST00000541213	CARMIL3	Q8ND23	1372 aa		27.64	■■■□□ 2.02
POLE-216	ENST00000541213	CTSW	P56202	376 aa		27.64	■■■□□ 2.02
POLE-216	ENST00000541213	NUTM1	Q86Y26	1132 aa		27.64	■■■□□ 2.02
POLE-216	ENST00000541213	TTLL11	Q8NHH1	800 aa		27.63	■■■□□ 2.01
POLE-216	ENST00000541213	COPRS	Q9NQ92	184 aa		27.63	■■■□□ 2.01
POLE-216	ENST00000541213	RFX5	P48382	616 aa	Predicted RBP	27.62	■■■□□ 2.01
POLE-216	ENST00000541213	CCDC57	Q2TAC2	916 aa		27.62	■■■□□ 2.01
POLE-216	ENST00000541213	LRRCC1	Q9C099	1032 aa		27.62	■■■□□ 2.01
POLE-216	ENST00000541213	TM4SF1	P30408	202 aa		27.62	■■■□□ 2.01
POLE-216	ENST00000541213	SLC10A5	Q5PT55	438 aa		27.62	■■■□□ 2.01
POLE-216	ENST00000541213	LNPK	Q9C0E8	428 aa		27.62	■■■□□ 2.01
POLE-216	ENST00000541213	APBB1	O00213	710 aa		27.61	■■■□□ 2.01
POLE-216	ENST00000541213	HCLS1	P14317	486 aa	Predicted RBP	27.61	■■■□□ 2.01
POLE-216	ENST00000541213	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.61	■■■□□ 2.01
POLE-216	ENST00000541213	ERFE	Q4G0M1	354 aa		27.61	■■■□□ 2.01
POLE-216	ENST00000541213	ERC1	Q8IUD2	1116 aa		27.61	■■■□□ 2.01
POLE-216	ENST00000541213	PA2G4	Q9UQ80	394 aa	Known RBP	27.61	■■■□□ 2.01
POLE-216	ENST00000541213	NPHP1	O15259	732 aa		27.6	■■■□□ 2.01
POLE-216	ENST00000541213	PTPN12	Q05209	780 aa	Known RBP	27.6	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms