RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 LAMB2P55268 1798 aa15.59■□□□□ 0.09
SMAD3-204ENST00000540846 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
SMAD3-204ENST00000540846 UTYO14607 1347 aa15.59■□□□□ 0.09
SMAD3-204ENST00000540846 UBN2Q6ZU65 1347 aa15.59■□□□□ 0.09
SMAD3-204ENST00000540846 ATP5J2-PTCD1G3V325 749 aa15.58■□□□□ 0.09
SMAD3-204ENST00000540846 NEXNQ0ZGT2 675 aa15.58■□□□□ 0.09
SMAD3-204ENST00000540846 SLC15A2Q16348 729 aa15.58■□□□□ 0.09
SMAD3-204ENST00000540846 TRAPPC3LQ5T215 181 aa15.58■□□□□ 0.09
SMAD3-204ENST00000540846 CLEC4GQ6UXB4 293 aa15.58■□□□□ 0.09
SMAD3-204ENST00000540846 NUCB1Q02818 461 aa15.58■□□□□ 0.08
SMAD3-204ENST00000540846 GCKRQ14397 625 aa15.58■□□□□ 0.08
SMAD3-204ENST00000540846 USPL1Q5W0Q7 1092 aa15.58■□□□□ 0.08
SMAD3-204ENST00000540846 NPM2Q86SE8 214 aaKnown RBP15.58■□□□□ 0.08
SMAD3-204ENST00000540846 COL23A1Q86Y22 540 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-204ENST00000540846 ANKRD44Q8N8A2 993 aa15.58■□□□□ 0.08
SMAD3-204ENST00000540846 ARXQ96QS3 562 aa15.58■□□□□ 0.08
SMAD3-204ENST00000540846 DDX60Q8IY21 1712 aaKnown RBP15.57■□□□□ 0.08
SMAD3-204ENST00000540846 HSP90AB3PQ58FF7 597 aa15.57■□□□□ 0.08
SMAD3-204ENST00000540846 NLRP10Q86W26 655 aa15.57■□□□□ 0.08
SMAD3-204ENST00000540846 RPAP2Q8IXW5 612 aaPredicted RBP15.57■□□□□ 0.08
SMAD3-204ENST00000540846 CCDC191Q8NCU4 936 aa15.57■□□□□ 0.08
SMAD3-204ENST00000540846 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
SMAD3-204ENST00000540846 MYH3P11055 1940 aa15.56■□□□□ 0.08
SMAD3-204ENST00000540846 NBPF7P0C2Y1 421 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-204ENST00000540846 GYS1P13807 737 aa15.56■□□□□ 0.08
SMAD3-204ENST00000540846 RFC4P35249 363 aa15.56■□□□□ 0.08
SMAD3-204ENST00000540846 CASP7P55210 303 aa15.56■□□□□ 0.08
SMAD3-204ENST00000540846 CEP85Q6P2H3 762 aa15.56■□□□□ 0.08
SMAD3-204ENST00000540846 NRXN2Q9P2S2 1712 aa15.56■□□□□ 0.08
SMAD3-204ENST00000540846 GRM8O00222 908 aa15.55■□□□□ 0.08
SMAD3-204ENST00000540846 GPTP24298 496 aa15.55■□□□□ 0.08
SMAD3-204ENST00000540846 ZPR1O75312 459 aa15.54■□□□□ 0.08
SMAD3-204ENST00000540846 GNAI3P08754 354 aa15.54■□□□□ 0.08
SMAD3-204ENST00000540846 TBC1D9BQ66K14 1250 aa15.54■□□□□ 0.08
SMAD3-204ENST00000540846 FLAD1Q8NFF5 587 aa15.54■□□□□ 0.08
SMAD3-204ENST00000540846 CWC25Q9NXE8 425 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-204ENST00000540846 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
SMAD3-204ENST00000540846 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
SMAD3-204ENST00000540846 H7C1W4 665 aa15.53■□□□□ 0.08
SMAD3-204ENST00000540846 CHD1LQ86WJ1 897 aa15.53■□□□□ 0.08
SMAD3-204ENST00000540846 KAZALD1Q96I82 304 aa15.53■□□□□ 0.08
SMAD3-204ENST00000540846 DCTPP1Q9H773 170 aa15.53■□□□□ 0.08
SMAD3-204ENST00000540846 ANP32AP39687 249 aaKnown RBP15.53■□□□□ 0.08
SMAD3-204ENST00000540846 NIP7Q9Y221 180 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMAD3-204ENST00000540846 NTSR2O95665 410 aa15.52■□□□□ 0.07
SMAD3-204ENST00000540846 GNAI2P04899 355 aa15.52■□□□□ 0.07
SMAD3-204ENST00000540846 PARP10Q53GL7 1025 aa15.52■□□□□ 0.07
SMAD3-204ENST00000540846 SUSD4Q5VX71 490 aa15.52■□□□□ 0.07
SMAD3-204ENST00000540846 UBE3BQ7Z3V4 1068 aa15.52■□□□□ 0.07
SMAD3-204ENST00000540846 PDGFDQ9GZP0 370 aaPredicted RBP15.52■□□□□ 0.07
SMAD3-204ENST00000540846 PCCAP05165 728 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-204ENST00000540846 UBTFL1P0CB47 393 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-204ENST00000540846 NFIXQ14938 502 aa15.51■□□□□ 0.07
SMAD3-204ENST00000540846 JARID2Q92833 1246 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-204ENST00000540846 C9orf78Q9NZ63 289 aaPredicted RBP15.51■□□□□ 0.07
SMAD3-204ENST00000540846 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
SMAD3-204ENST00000540846 HMMRO75330 724 aa15.5■□□□□ 0.07
SMAD3-204ENST00000540846 TM4SF1P30408 202 aa15.5■□□□□ 0.07
SMAD3-204ENST00000540846 SYNE4Q8N205 404 aa15.5■□□□□ 0.07
SMAD3-204ENST00000540846 ZBTB38Q8NAP3 1195 aaPredicted RBP15.5■□□□□ 0.07
SMAD3-204ENST00000540846 SUCLG2Q96I99 432 aa15.5■□□□□ 0.07
SMAD3-204ENST00000540846 LNPKQ9C0E8 428 aa15.5■□□□□ 0.07
SMAD3-204ENST00000540846 LRRFIP2Q9Y608 721 aaKnown RBP15.5■□□□□ 0.07
SMAD3-204ENST00000540846 CDHR2Q9BYE9 1310 aa15.5■□□□□ 0.07
SMAD3-204ENST00000540846 ANKRD31Q8N7Z5 1873 aa15.5■□□□□ 0.07
SMAD3-204ENST00000540846 EPHA10Q5JZY3 1008 aa15.49■□□□□ 0.07
SMAD3-204ENST00000540846 ANKRD45Q5TZF3 282 aa15.49■□□□□ 0.07
SMAD3-204ENST00000540846 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
SMAD3-204ENST00000540846 DDR1Q08345 913 aa15.49■□□□□ 0.07
SMAD3-204ENST00000540846 FAM89AQ96GI7 184 aa15.49■□□□□ 0.07
SMAD3-204ENST00000540846 ABCC12Q96J65 1359 aa15.48■□□□□ 0.07
SMAD3-204ENST00000540846 FOXO4P98177 505 aa15.48■□□□□ 0.07
SMAD3-204ENST00000540846 MTX1Q13505 466 aa15.48■□□□□ 0.07
SMAD3-204ENST00000540846 RABL6Q3YEC7 729 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-204ENST00000540846 RTL5Q5HYW3 569 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-204ENST00000540846 BICDL1Q6ZP65 573 aa15.48■□□□□ 0.07
SMAD3-204ENST00000540846 SETDB2Q96T68 719 aa15.47■□□□□ 0.07
SMAD3-204ENST00000540846 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
SMAD3-204ENST00000540846 PLA2G12BQ9BX93 195 aa15.47■□□□□ 0.07
SMAD3-204ENST00000540846 BICC1Q9H694 974 aaKnown RBP15.47■□□□□ 0.07
SMAD3-204ENST00000540846 TRMT112Q9UI30 125 aaKnown RBP15.47■□□□□ 0.07
SMAD3-204ENST00000540846 RIC1Q4ADV7 1423 aa15.46■□□□□ 0.07
SMAD3-204ENST00000540846 SH3TC1Q8TE82 1336 aa15.46■□□□□ 0.07
SMAD3-204ENST00000540846 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
SMAD3-204ENST00000540846 PPP1R42Q7Z4L9 355 aa15.46■□□□□ 0.07
SMAD3-204ENST00000540846 NLGN1Q8N2Q7 840 aa15.46■□□□□ 0.07
SMAD3-204ENST00000540846 COL4A1P02462 1669 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 PNMA6EA0A0J9YXQ4 647 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 MSH5O43196 834 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 NUTM1Q86Y26 1132 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 LRP5O75197 1615 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 ATP8B2P98198 1209 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 ERFEQ4G0M1 354 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 BMP2KLQ5H9B9 411 aa15.45■□□□□ 0.06
SMAD3-204ENST00000540846 IRS4O14654 1257 aaPredicted RBP15.44■□□□□ 0.06
SMAD3-204ENST00000540846 POLA2Q14181 598 aa15.44■□□□□ 0.06
SMAD3-204ENST00000540846 SLC10A5Q5PT55 438 aa15.44■□□□□ 0.06
SMAD3-204ENST00000540846 MSL1Q68DK7 614 aa15.44■□□□□ 0.06
SMAD3-204ENST00000540846 SSH3Q8TE77 659 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms