RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
PXN-209ENST00000540221 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
PXN-209ENST00000540221 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
PXN-209ENST00000540221 FAM177BA6PVY3 158 aa11.59□□□□□ -0.55
PXN-209ENST00000540221 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
PXN-209ENST00000540221 ALDH1L2Q3SY69 923 aa11.59□□□□□ -0.55
PXN-209ENST00000540221 CRY2Q49AN0 593 aa11.59□□□□□ -0.55
PXN-209ENST00000540221 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
PXN-209ENST00000540221 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.55
PXN-209ENST00000540221 ERFEQ4G0M1 354 aa11.58□□□□□ -0.56
PXN-209ENST00000540221 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
PXN-209ENST00000540221 ZBED9Q6R2W3 1325 aa11.58□□□□□ -0.56
PXN-209ENST00000540221 HOXA10P31260 410 aaPredicted RBP11.57□□□□□ -0.56
PXN-209ENST00000540221 GRIPAP1Q4V328 841 aa11.57□□□□□ -0.56
PXN-209ENST00000540221 NUTM1Q86Y26 1132 aa11.57□□□□□ -0.56
PXN-209ENST00000540221 ZBTB38Q8NAP3 1195 aaPredicted RBP11.57□□□□□ -0.56
PXN-209ENST00000540221 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
PXN-209ENST00000540221 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
PXN-209ENST00000540221 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
PXN-209ENST00000540221 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
PXN-209ENST00000540221 AFDNP55196 1824 aaKnown RBP11.56□□□□□ -0.56
PXN-209ENST00000540221 ATP5J2-PTCD1G3V325 749 aa11.56□□□□□ -0.56
PXN-209ENST00000540221 TCERG1O14776 1098 aaKnown RBP11.56□□□□□ -0.56
PXN-209ENST00000540221 PCCAP05165 728 aaPredicted RBP11.56□□□□□ -0.56
PXN-209ENST00000540221 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
PXN-209ENST00000540221 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
PXN-209ENST00000540221 LINS1Q8NG48 757 aa11.56□□□□□ -0.56
PXN-209ENST00000540221 RBM17Q96I25 401 aaKnown RBP11.56□□□□□ -0.56
PXN-209ENST00000540221 CRAMP1Q96RY5 1269 aa11.56□□□□□ -0.56
PXN-209ENST00000540221 MYD88Q99836 296 aa11.56□□□□□ -0.56
PXN-209ENST00000540221 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
PXN-209ENST00000540221 PTPRCP08575 1304 aa11.56□□□□□ -0.56
PXN-209ENST00000540221 ADCY9O60503 1353 aa11.55□□□□□ -0.56
PXN-209ENST00000540221 YY1P25490 414 aa11.55□□□□□ -0.56
PXN-209ENST00000540221 BRPF1P55201 1214 aaPredicted RBP11.55□□□□□ -0.56
PXN-209ENST00000540221 PRPF40BQ6NWY9 871 aaKnown RBP11.55□□□□□ -0.56
PXN-209ENST00000540221 ARHGAP27Q6ZUM4 889 aa11.55□□□□□ -0.56
PXN-209ENST00000540221 G2E3Q7L622 706 aa11.55□□□□□ -0.56
PXN-209ENST00000540221 TMC4Q7Z404 712 aa11.55□□□□□ -0.56
PXN-209ENST00000540221 NUP98P52948 1817 aa11.55□□□□□ -0.56
PXN-209ENST00000540221 KIAA1551Q9HCM1 1747 aa11.55□□□□□ -0.56
PXN-209ENST00000540221 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
PXN-209ENST00000540221 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
PXN-209ENST00000540221 CDHR2Q9BYE9 1310 aa11.54□□□□□ -0.56
PXN-209ENST00000540221 GOLGB1Q14789 3259 aaKnown RBP11.53□□□□□ -0.56
PXN-209ENST00000540221 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 BBOX1O75936 387 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 SF3B3Q15393 1217 aaKnown RBP11.53□□□□□ -0.56
PXN-209ENST00000540221 DDX46Q7L014 1031 aaKnown RBP11.53□□□□□ -0.56
PXN-209ENST00000540221 RTKN2Q8IZC4 609 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 MRPL50Q8N5N7 158 aaKnown RBP11.53□□□□□ -0.56
PXN-209ENST00000540221 SSH1Q8WYL5 1049 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 FAM89AQ96GI7 184 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 SMC4Q9NTJ3 1288 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 WWC3Q9ULE0 1092 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 LTBP3Q9NS15 1303 aa11.53□□□□□ -0.56
PXN-209ENST00000540221 UTRNP46939 3433 aa11.52□□□□□ -0.57
PXN-209ENST00000540221 PDE8AO60658 829 aa11.52□□□□□ -0.57
PXN-209ENST00000540221 ALDH1L1O75891 902 aa11.52□□□□□ -0.57
PXN-209ENST00000540221 HCLS1P14317 486 aaPredicted RBP11.52□□□□□ -0.57
PXN-209ENST00000540221 GCKRQ14397 625 aa11.52□□□□□ -0.57
PXN-209ENST00000540221 CCDC93Q567U6 631 aa11.52□□□□□ -0.57
PXN-209ENST00000540221 KIF16BQ96L93 1317 aa11.52□□□□□ -0.57
PXN-209ENST00000540221 ZC3H4Q9UPT8 1303 aaKnown RBP11.52□□□□□ -0.57
PXN-209ENST00000540221 ANKRD36CQ5JPF3 1778 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
PXN-209ENST00000540221 H7C1W4 665 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 C21orf2O43822 256 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 CCDC152Q4G0S7 254 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 BEND3Q5T5X7 828 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 SRCIN1Q9C0H9 1055 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 ANKRD31Q8N7Z5 1873 aa11.51□□□□□ -0.57
PXN-209ENST00000540221 CACNA1FO60840 1977 aa11.5□□□□□ -0.57
PXN-209ENST00000540221 ARFGEF2Q9Y6D5 1785 aa11.5□□□□□ -0.57
PXN-209ENST00000540221 IPO8O15397 1037 aaKnown RBP11.5□□□□□ -0.57
PXN-209ENST00000540221 LMNB1P20700 586 aa11.5□□□□□ -0.57
PXN-209ENST00000540221 RARSP54136 660 aaKnown RBP11.5□□□□□ -0.57
PXN-209ENST00000540221 GRAPQ13588 217 aa11.5□□□□□ -0.57
PXN-209ENST00000540221 CWF19L2Q2TBE0 894 aaKnown RBP11.5□□□□□ -0.57
PXN-209ENST00000540221 GRAPLQ8TC17 118 aaPredicted RBP11.5□□□□□ -0.57
PXN-209ENST00000540221 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
PXN-209ENST00000540221 TAOK3Q9H2K8 898 aa11.5□□□□□ -0.57
PXN-209ENST00000540221 BRCA1P38398 1863 aaKnown RBP11.49□□□□□ -0.57
PXN-209ENST00000540221 F6X3S4 739 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
PXN-209ENST00000540221 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 SYNE4Q8N205 404 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 PSMD1Q99460 953 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 PLA2G12BQ9BX93 195 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 VPS33BQ9H267 617 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 HDAC5Q9UQL6 1122 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 ATP6V0A2Q9Y487 856 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
PXN-209ENST00000540221 NFKBIEO00221 500 aa11.48□□□□□ -0.57
PXN-209ENST00000540221 CCT4P50991 539 aaKnown RBP11.48□□□□□ -0.57
PXN-209ENST00000540221 CTSWP56202 376 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms