RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 CRY2Q49AN0 593 aa25.74■■□□□ 1.71
C1RL-207ENST00000539927 PLEKHF1Q96S99 279 aa25.74■■□□□ 1.71
C1RL-207ENST00000539927 UBN2Q6ZU65 1347 aa25.73■■□□□ 1.71
C1RL-207ENST00000539927 TMEM88BA6NKF7 163 aa25.73■■□□□ 1.71
C1RL-207ENST00000539927 TCERG1O14776 1098 aaKnown RBP25.73■■□□□ 1.71
C1RL-207ENST00000539927 GJA3Q9Y6H8 435 aa25.73■■□□□ 1.71
C1RL-207ENST00000539927 LTBP1Q14766 1721 aa25.73■■□□□ 1.71
C1RL-207ENST00000539927 COL4A5P29400 1685 aa25.73■■□□□ 1.71
C1RL-207ENST00000539927 MAPK8IP3Q9UPT6 1336 aa25.72■■□□□ 1.71
C1RL-207ENST00000539927 SUSD4Q5VX71 490 aa25.72■■□□□ 1.71
C1RL-207ENST00000539927 PSMD1Q99460 953 aa25.72■■□□□ 1.71
C1RL-207ENST00000539927 SNED1Q8TER0 1413 aa25.71■■□□□ 1.71
C1RL-207ENST00000539927 EIF6P56537 245 aaKnown RBP25.71■■□□□ 1.71
C1RL-207ENST00000539927 MAP1SQ66K74 1059 aaPredicted RBP25.71■■□□□ 1.71
C1RL-207ENST00000539927 PNMA8AQ86V59 439 aaPredicted RBP25.71■■□□□ 1.71
C1RL-207ENST00000539927 GPC2Q8N158 579 aa25.71■■□□□ 1.71
C1RL-207ENST00000539927 FOXN1O15353 648 aa25.7■■□□□ 1.7
C1RL-207ENST00000539927 VEGFBP49765 207 aa25.7■■□□□ 1.7
C1RL-207ENST00000539927 SLC51AQ86UW1 340 aa25.7■■□□□ 1.7
C1RL-207ENST00000539927 CNTROBQ8N137 903 aa25.7■■□□□ 1.7
C1RL-207ENST00000539927 CC2D2BQ6DHV5 1058 aa25.69■■□□□ 1.7
C1RL-207ENST00000539927 RBM17Q96I25 401 aaKnown RBP25.69■■□□□ 1.7
C1RL-207ENST00000539927 IBTKQ9P2D0 1353 aaPredicted RBP25.69■■□□□ 1.7
C1RL-207ENST00000539927 LARGE2Q8N3Y3 721 aa25.68■■□□□ 1.7
C1RL-207ENST00000539927 EIF2S2P20042 333 aaKnown RBP25.67■■□□□ 1.7
C1RL-207ENST00000539927 HOXA10P31260 410 aaPredicted RBP25.67■■□□□ 1.7
C1RL-207ENST00000539927 RIC1Q4ADV7 1423 aa25.67■■□□□ 1.7
C1RL-207ENST00000539927 GIGYF2Q6Y7W6 1299 aaKnown RBP25.67■■□□□ 1.7
C1RL-207ENST00000539927 ZNF34Q8IZ26 560 aa25.67■■□□□ 1.7
C1RL-207ENST00000539927 AIDAQ96BJ3 306 aa25.67■■□□□ 1.7
C1RL-207ENST00000539927 PNNQ9H307 717 aaKnown RBP25.67■■□□□ 1.7
C1RL-207ENST00000539927 TSPYL4Q9UJ04 414 aa25.67■■□□□ 1.7
C1RL-207ENST00000539927 PPEF1O14829 653 aaPredicted RBP25.66■■□□□ 1.7
C1RL-207ENST00000539927 NTSR2O95665 410 aa25.66■■□□□ 1.7
C1RL-207ENST00000539927 LMOD1P29536 600 aaPredicted RBP25.66■■□□□ 1.7
C1RL-207ENST00000539927 PPP1R42Q7Z4L9 355 aa25.66■■□□□ 1.7
C1RL-207ENST00000539927 C3orf67Q6ZVT6 689 aa25.65■■□□□ 1.7
C1RL-207ENST00000539927 CRAMP1Q96RY5 1269 aa25.65■■□□□ 1.7
C1RL-207ENST00000539927 POLR2AP24928 1970 aaKnown RBP25.65■■□□□ 1.7
C1RL-207ENST00000539927 DEFB115Q30KQ5 88 aa25.64■■□□□ 1.7
C1RL-207ENST00000539927 ABT1Q9ULW3 272 aaKnown RBP25.64■■□□□ 1.7
C1RL-207ENST00000539927 ERBB4Q15303 1308 aa25.63■■□□□ 1.69
C1RL-207ENST00000539927 ANXA1P04083 346 aa25.63■■□□□ 1.69
C1RL-207ENST00000539927 NLRP3Q96P20 1036 aa25.63■■□□□ 1.69
C1RL-207ENST00000539927 EPS15P42566 896 aa25.62■■□□□ 1.69
C1RL-207ENST00000539927 RIPK4P57078 832 aa25.62■■□□□ 1.69
C1RL-207ENST00000539927 GRIPAP1Q4V328 841 aa25.62■■□□□ 1.69
C1RL-207ENST00000539927 PARP10Q53GL7 1025 aa25.62■■□□□ 1.69
C1RL-207ENST00000539927 NIM1KQ8IY84 436 aa25.62■■□□□ 1.69
C1RL-207ENST00000539927 TMX4Q9H1E5 349 aaPredicted RBP25.62■■□□□ 1.69
C1RL-207ENST00000539927 PPIP5K2O43314 1243 aa25.61■■□□□ 1.69
C1RL-207ENST00000539927 CTCFP49711 727 aaPredicted RBP25.61■■□□□ 1.69
C1RL-207ENST00000539927 NECTIN2Q92692 538 aa25.61■■□□□ 1.69
C1RL-207ENST00000539927 SCNN1DP51172 638 aa25.6■■□□□ 1.69
C1RL-207ENST00000539927 AOC3Q16853 763 aa25.6■■□□□ 1.69
C1RL-207ENST00000539927 PROSER3Q2NL68 480 aa25.6■■□□□ 1.69
C1RL-207ENST00000539927 UTP14AQ9BVJ6 771 aaKnown RBP25.6■■□□□ 1.69
C1RL-207ENST00000539927 RASSF10A6NK89 507 aa25.59■■□□□ 1.69
C1RL-207ENST00000539927 FMR1Q06787 632 aaKnown RBP eCLIP25.59■■□□□ 1.69
C1RL-207ENST00000539927 AIMP1Q12904 312 aaKnown RBP25.59■■□□□ 1.69
C1RL-207ENST00000539927 PDIA6Q15084 440 aa25.59■■□□□ 1.69
C1RL-207ENST00000539927 PRDM10Q9NQV6 1147 aa25.59■■□□□ 1.69
C1RL-207ENST00000539927 DDX21Q9NR30 783 aaKnown RBP eCLIP25.59■■□□□ 1.69
C1RL-207ENST00000539927 LRP10Q7Z4F1 713 aa25.58■■□□□ 1.69
C1RL-207ENST00000539927 WBP1LQ9NX94 342 aa25.58■■□□□ 1.69
C1RL-207ENST00000539927 DDX60Q8IY21 1712 aaKnown RBP25.57■■□□□ 1.68
C1RL-207ENST00000539927 LBX1P52954 281 aa25.57■■□□□ 1.68
C1RL-207ENST00000539927 PAXIP1Q6ZW49 1069 aaPredicted RBP25.57■■□□□ 1.68
C1RL-207ENST00000539927 ABCC4O15439 1325 aa25.57■■□□□ 1.68
C1RL-207ENST00000539927 WDR33Q9C0J8 1336 aaKnown RBP25.57■■□□□ 1.68
C1RL-207ENST00000539927 ATP6V0A2Q9Y487 856 aa25.56■■□□□ 1.68
C1RL-207ENST00000539927 GRM1Q13255 1194 aa25.55■■□□□ 1.68
C1RL-207ENST00000539927 SLC10A5Q5PT55 438 aa25.55■■□□□ 1.68
C1RL-207ENST00000539927 COPS6Q7L5N1 327 aa25.55■■□□□ 1.68
C1RL-207ENST00000539927 HCLS1P14317 486 aaPredicted RBP25.54■■□□□ 1.68
C1RL-207ENST00000539927 TMPOP42166 694 aaKnown RBP25.54■■□□□ 1.68
C1RL-207ENST00000539927 NEUROD2Q15784 382 aa25.54■■□□□ 1.68
C1RL-207ENST00000539927 USP50Q70EL3 339 aaPredicted RBP25.54■■□□□ 1.68
C1RL-207ENST00000539927 XAGE3Q8WTP9 111 aa25.54■■□□□ 1.68
C1RL-207ENST00000539927 ZNF428Q96B54 188 aa25.54■■□□□ 1.68
C1RL-207ENST00000539927 CASP8AP2Q9UKL3 1982 aa25.54■■□□□ 1.68
C1RL-207ENST00000539927 TRAF5O00463 557 aa25.53■■□□□ 1.68
C1RL-207ENST00000539927 LMOD3Q0VAK6 560 aa25.52■■□□□ 1.68
C1RL-207ENST00000539927 HSP90AB3PQ58FF7 597 aa25.52■■□□□ 1.68
C1RL-207ENST00000539927 DPP8Q6V1X1 898 aaPredicted RBP25.52■■□□□ 1.68
C1RL-207ENST00000539927 SUPT20HQ8NEM7 779 aa25.52■■□□□ 1.68
C1RL-207ENST00000539927 THSD7BQ9C0I4 1608 aa25.52■■□□□ 1.68
C1RL-207ENST00000539927 MAP2K1Q02750 393 aaPredicted RBP25.51■■□□□ 1.67
C1RL-207ENST00000539927 CXCL9Q07325 125 aa25.51■■□□□ 1.67
C1RL-207ENST00000539927 NLRP10Q86W26 655 aa25.51■■□□□ 1.67
C1RL-207ENST00000539927 MPNDQ8N594 471 aa25.51■■□□□ 1.67
C1RL-207ENST00000539927 BABAM1Q9NWV8 329 aa25.51■■□□□ 1.67
C1RL-207ENST00000539927 GPRC5DQ9NZD1 345 aa25.51■■□□□ 1.67
C1RL-207ENST00000539927 TRMT112Q9UI30 125 aaKnown RBP25.51■■□□□ 1.67
C1RL-207ENST00000539927 ZNRF3Q9ULT6 936 aa25.51■■□□□ 1.67
C1RL-207ENST00000539927 LAS1LQ9Y4W2 734 aaKnown RBP25.51■■□□□ 1.67
C1RL-207ENST00000539927 HSPA8P11142 646 aaKnown RBP25.5■■□□□ 1.67
C1RL-207ENST00000539927 DDX46Q7L014 1031 aaKnown RBP25.5■■□□□ 1.67
C1RL-207ENST00000539927 CCDC146Q8IYE0 955 aa25.5■■□□□ 1.67
C1RL-207ENST00000539927 VPS33BQ9H267 617 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms