RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 SLC24A3Q9HC58 644 aa3.8□□□□□ -1.8
NPIPB4-209ENST00000538859 ANGEL1Q9UNK9 670 aaKnown RBP3.8□□□□□ -1.8
NPIPB4-209ENST00000538859 HMX2A2RU54 273 aa3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 CTSWP56202 376 aa3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 LSRQ86X29 649 aaPredicted RBP3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 LRRC56Q8IYG6 542 aaPredicted RBP3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 BHLHE22Q8NFJ8 381 aaPredicted RBP3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 FBXL18Q96ME1 805 aa3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 NAGPAQ9UK23 515 aa3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 SLC6A14Q9UN76 642 aa3.79□□□□□ -1.8
NPIPB4-209ENST00000538859 STAU1O95793 577 aaKnown RBP3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 SPEM2Q0P670 501 aa3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 SH3D19Q5HYK7 790 aa3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 PSAPL1Q6NUJ1 521 aa3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 TP53INP2Q8IXH6 220 aa3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 WDR26Q9H7D7 661 aa3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 FAM53CQ9NYF3 392 aa3.78□□□□□ -1.8
NPIPB4-209ENST00000538859 INHBBP09529 407 aa3.77□□□□□ -1.81
NPIPB4-209ENST00000538859 SLC38A3Q99624 504 aa3.77□□□□□ -1.81
NPIPB4-209ENST00000538859 DHX15O43143 795 aaKnown RBP3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 USP17L8P0C7I0 530 aa3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 RNF20Q5VTR2 975 aa3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 AGGF1Q8N302 714 aaeCLIP3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 ZSCAN18Q8TBC5 510 aaPredicted RBP3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 MYRFLQ96LU7 910 aa3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 HMX1Q9NP08 348 aaPredicted RBP3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 PCDHB9Q9Y5E1 797 aa3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 PCDHB11Q9Y5F2 797 aa3.76□□□□□ -1.81
NPIPB4-209ENST00000538859 ZBBXA8MT70 800 aa3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 SUV39H1O43463 412 aa3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 MCCD1P59942 119 aaPredicted RBP3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 PLAURQ03405 335 aa3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 DDRGK1Q96HY6 314 aa3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 MRPL18Q9H0U6 180 aaKnown RBP3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 ESF1Q9H501 851 aaKnown RBP3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 ETNK1Q9HBU6 452 aa3.75□□□□□ -1.81
NPIPB4-209ENST00000538859 OVOL3O00110 214 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 RGS9O75916 674 aaPredicted RBP3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 TLR1Q15399 786 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 VSIG10LQ86VR7 867 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 FAM84AQ96KN4 292 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 FAM117AQ9C073 453 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 PAK6Q9NQU5 681 aaPredicted RBP3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 ZDHHC3Q9NYG2 299 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 PIM2Q9P1W9 311 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 GJA3Q9Y6H8 435 aa3.74□□□□□ -1.81
NPIPB4-209ENST00000538859 IGHA2P01877 340 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 GLB1P16278 677 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 HOXA5P20719 270 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 RFC5P40937 340 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 RAP1GAPP47736 663 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 AMIGO3Q86WK7 504 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 RELTQ969Z4 430 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 NIFKQ9BYG3 293 aaKnown RBP3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 TRIM34Q9BYJ4 488 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 KDM4CQ9H3R0 1056 aa3.73□□□□□ -1.81
NPIPB4-209ENST00000538859 WDR64B1ANS9 1081 aa3.72□□□□□ -1.81
NPIPB4-209ENST00000538859 FBXO45P0C2W1 286 aa3.72□□□□□ -1.81
NPIPB4-209ENST00000538859 NFKB2Q00653 900 aa3.72□□□□□ -1.81
NPIPB4-209ENST00000538859 TMEM259Q4ZIN3 620 aa3.72□□□□□ -1.81
NPIPB4-209ENST00000538859 ESCO1Q5FWF5 840 aa3.72□□□□□ -1.81
NPIPB4-209ENST00000538859 TMEM40Q8WWA1 233 aa3.72□□□□□ -1.81
NPIPB4-209ENST00000538859 TATP17735 454 aaPredicted RBP3.71□□□□□ -1.82
NPIPB4-209ENST00000538859 BRPF1P55201 1214 aaPredicted RBP3.71□□□□□ -1.82
NPIPB4-209ENST00000538859 NBPF1Q3BBV0 1214 aa3.71□□□□□ -1.82
NPIPB4-209ENST00000538859 C7orf43Q8WVR3 580 aa3.71□□□□□ -1.82
NPIPB4-209ENST00000538859 ZNF592Q92610 1267 aa3.71□□□□□ -1.82
NPIPB4-209ENST00000538859 UBE2OQ9C0C9 1292 aaKnown RBP3.71□□□□□ -1.82
NPIPB4-209ENST00000538859 GPBP1L1Q9HC44 474 aaPredicted RBP3.71□□□□□ -1.82
NPIPB4-209ENST00000538859 FOSL1P15407 271 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 TBC1D8BQ0IIM8 1120 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 NR1H3Q13133 447 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 NEUROD1Q13562 356 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 WFDC8Q8IUA0 241 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 FAM168AQ92567 244 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 COL26A1Q96A83 441 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 FAM46AQ96IP4 442 aaKnown RBP3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 FAM83CQ9BQN1 747 aa3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 CDCA7Q9BWT1 371 aaPredicted RBP3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 DNAJB12Q9NXW2 375 aaKnown RBP3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 ZNF330Q9Y3S2 320 aaPredicted RBP3.7□□□□□ -1.82
NPIPB4-209ENST00000538859 TSPAN15O95858 294 aa3.69□□□□□ -1.82
NPIPB4-209ENST00000538859 MYCP01106 439 aaPredicted RBP3.69□□□□□ -1.82
NPIPB4-209ENST00000538859 LRRC69Q6ZNQ3 347 aa3.69□□□□□ -1.82
NPIPB4-209ENST00000538859 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.69□□□□□ -1.82
NPIPB4-209ENST00000538859 AGBL5Q8NDL9 886 aa3.69□□□□□ -1.82
NPIPB4-209ENST00000538859 GJD4Q96KN9 370 aaPredicted RBP3.69□□□□□ -1.82
NPIPB4-209ENST00000538859 LPIN3Q9BQK8 851 aa3.69□□□□□ -1.82
NPIPB4-209ENST00000538859 BIN1O00499 593 aa3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 FOXD2O60548 495 aaPredicted RBP3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 KCNQ4P56696 695 aa3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 CLEC10AQ8IUN9 316 aa3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 BHMTQ93088 406 aa3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 PCMTD1Q96MG8 357 aaPredicted RBP3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 IGFLR1Q9H665 355 aa3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 IQSEC3Q9UPP2 1182 aaPredicted RBP3.68□□□□□ -1.82
NPIPB4-209ENST00000538859 USP3Q9Y6I4 520 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms