RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 A0A1W2PRG0 241 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 GNAT3A8MTJ3 354 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 ZFYP08048 801 aaPredicted RBP7.91□□□□□ -1.14
SORT1-209ENST00000538502 LIG1P18858 919 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 NUTM1Q86Y26 1132 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 SIL1Q9H173 461 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 HOMER2Q9NSB8 354 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 SAMD15Q9P1V8 674 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 TMCO5BA8MYB1 307 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 CFAP70Q5T0N1 1121 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 TMX3Q96JJ7 454 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 IKBKGQ9Y6K9 419 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 GBP1P32455 592 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 TTF1Q15361 905 aaPredicted RBP7.91□□□□□ -1.14
SORT1-209ENST00000538502 USP48Q86UV5 1035 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 SPATS2Q86XZ4 545 aaKnown RBP7.91□□□□□ -1.14
SORT1-209ENST00000538502 PPFIBP2Q8ND30 876 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 SMC6Q96SB8 1091 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 HYPKQ9NX55 129 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 TROQ12816 1431 aaPredicted RBP7.91□□□□□ -1.14
SORT1-209ENST00000538502 NAIPQ13075 1403 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 CAMSAP2Q08AD1 1489 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 ZNF213O14771 459 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 ATP11AP98196 1134 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 AFAP1L1Q8TED9 768 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 SSH1Q8WYL5 1049 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 MRPS27Q92552 414 aaKnown RBP7.91□□□□□ -1.14
SORT1-209ENST00000538502 CDK19Q9BWU1 502 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 TCP11L1Q9NUJ3 509 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 MTMR7Q9Y216 660 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 SYT1P21579 422 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 SYKP43405 635 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 CCDC184Q52MB2 194 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 KRBA2Q6ZNG9 492 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 USH1CQ9Y6N9 552 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 FAM135AQ9P2D6 1515 aa7.91□□□□□ -1.14
SORT1-209ENST00000538502 GOLGA8AA7E2F4 631 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 GOLGA8BA8MQT2 603 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 F13A1P00488 732 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 SETDB1Q15047 1291 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 ATRIPQ8WXE1 791 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 TBC1D5Q92609 795 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 MPHOSPH8Q99549 860 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 IL1RAPL2Q9NP60 686 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 NLRP2Q9NX02 1062 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 STIM2Q9P246 746 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 MYO1BO43795 1136 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 TRIM14Q14142 442 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 BTBD11A6QL63 1104 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 MCM6Q14566 821 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 DHX37Q8IY37 1157 aaKnown RBP7.9□□□□□ -1.14
SORT1-209ENST00000538502 PAF1Q8N7H5 531 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 CPLX3Q8WVH0 158 aa7.9□□□□□ -1.14
SORT1-209ENST00000538502 IBSPP21815 317 aaPredicted RBP7.9□□□□□ -1.15
SORT1-209ENST00000538502 IQCA1Q86XH1 822 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 JAKMIP2Q96AA8 810 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 IMPACTQ9P2X3 320 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 N4BP3O15049 544 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 CABP4P57796 275 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 CCDC40Q4G0X9 1142 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 CCDC110Q8TBZ0 833 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 NEK1Q96PY6 1258 aa7.9□□□□□ -1.15
SORT1-209ENST00000538502 NAP1L3Q99457 506 aaPredicted RBP7.9□□□□□ -1.15
SORT1-209ENST00000538502 ZNF644Q9H582 1327 aaPredicted RBP7.9□□□□□ -1.15
SORT1-209ENST00000538502 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
SORT1-209ENST00000538502 PPP1R2P41236 205 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 PPP4R3AQ6IN85 833 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 GIMAP6Q6P9H5 292 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 CATIPQ7Z7H3 387 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 CACNA2D3Q8IZS8 1091 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 TYRO3Q06418 890 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 CTNNBL1Q8WYA6 563 aaPredicted RBP7.89□□□□□ -1.15
SORT1-209ENST00000538502 LUC7L2Q9Y383 392 aaKnown RBP7.89□□□□□ -1.15
SORT1-209ENST00000538502 SYNJ1O43426 1573 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 ATP2A1O14983 1001 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 TNNC1P63316 161 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 MAP3K9P80192 1104 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 ECHDC1Q9NTX5 307 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 ANAPC4Q9UJX5 808 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 EXOC6BQ9Y2D4 811 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.89□□□□□ -1.153e-7■■■□□ 14.9
SORT1-209ENST00000538502 CCDC194A0A1B0GVG4 234 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 CTNNA2P26232 953 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 ALDH3A1P30838 453 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 CLUL1Q15846 466 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 CCDC96Q2M329 555 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 C20orf194Q5TEA3 1177 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 CEP57Q86XR8 500 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 PIBF1Q8WXW3 757 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 PRAM1Q96QH2 718 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 SLC52A1Q9NWF4 448 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 C8orf34Q49A92 452 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 ABTB2Q8N961 1025 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.89□□□□□ -1.151e-6■□□□□ 9.1
SORT1-209ENST00000538502 NAPBQ9H115 298 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 EXOC1Q9NV70 894 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 IFIT1P09914 478 aaKnown RBP7.89□□□□□ -1.15
SORT1-209ENST00000538502 IARSP41252 1262 aaKnown RBP7.89□□□□□ -1.15
SORT1-209ENST00000538502 MATR3P43243 847 aaKnown RBP eCLIP7.89□□□□□ -1.158e-7■■■■□ 20.3
SORT1-209ENST00000538502 NOP2P46087 812 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms