RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 ZPR1O75312 459 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
LDHA-216ENST00000538451 RPAP2Q8IXW5 612 aaPredicted RBP12.63□□□□□ -0.39
LDHA-216ENST00000538451 CCDC191Q8NCU4 936 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 FLAD1Q8NFF5 587 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 LY75O60449 1722 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 SRCAPQ6ZRS2 3230 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 COL15A1P39059 1388 aa12.63□□□□□ -0.39
LDHA-216ENST00000538451 GNPATO15228 680 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 TCIRG1Q13488 830 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 CENPQQ7L2Z9 268 aaPredicted RBP12.62□□□□□ -0.39
LDHA-216ENST00000538451 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
LDHA-216ENST00000538451 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
LDHA-216ENST00000538451 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
LDHA-216ENST00000538451 NEURL1BA8MQ27 555 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 GRM8O00222 908 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 RFC4P35249 363 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
LDHA-216ENST00000538451 B4GALNT3Q6L9W6 998 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
LDHA-216ENST00000538451 SP7Q8TDD2 431 aaPredicted RBP12.62□□□□□ -0.39
LDHA-216ENST00000538451 MTFR1LQ9H019 292 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 TFCP2L1Q9NZI6 479 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 SSUH2Q9Y2M2 353 aa12.62□□□□□ -0.39
LDHA-216ENST00000538451 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
LDHA-216ENST00000538451 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
LDHA-216ENST00000538451 SSFA2P28290 1259 aa12.61□□□□□ -0.39
LDHA-216ENST00000538451 KCNQ4P56696 695 aa12.61□□□□□ -0.39
LDHA-216ENST00000538451 GCKRQ14397 625 aa12.61□□□□□ -0.39
LDHA-216ENST00000538451 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
LDHA-216ENST00000538451 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
LDHA-216ENST00000538451 TBC1D2BQ9UPU7 963 aa12.61□□□□□ -0.39
LDHA-216ENST00000538451 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
LDHA-216ENST00000538451 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
LDHA-216ENST00000538451 CWF19L2Q2TBE0 894 aaKnown RBP12.6□□□□□ -0.39
LDHA-216ENST00000538451 PPP1R42Q7Z4L9 355 aa12.6□□□□□ -0.39
LDHA-216ENST00000538451 MEIS3Q99687 375 aa12.6□□□□□ -0.39
LDHA-216ENST00000538451 USP44Q9H0E7 712 aa12.6□□□□□ -0.39
LDHA-216ENST00000538451 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
LDHA-216ENST00000538451 N4BP2Q86UW6 1770 aaPredicted RBP12.59□□□□□ -0.39
LDHA-216ENST00000538451 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
LDHA-216ENST00000538451 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
LDHA-216ENST00000538451 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
LDHA-216ENST00000538451 UTYO14607 1347 aa12.58□□□□□ -0.39
LDHA-216ENST00000538451 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 ATP5J2-PTCD1G3V325 749 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 IGKV5-2P06315 115 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
LDHA-216ENST00000538451 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
LDHA-216ENST00000538451 CAMTA2O94983 1202 aa12.57□□□□□ -0.4
LDHA-216ENST00000538451 HSP90AB4PQ58FF6 505 aa12.57□□□□□ -0.4
LDHA-216ENST00000538451 ANKRD44Q8N8A2 993 aa12.57□□□□□ -0.4
LDHA-216ENST00000538451 ZBTB38Q8NAP3 1195 aaPredicted RBP12.57□□□□□ -0.4
LDHA-216ENST00000538451 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
LDHA-216ENST00000538451 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
LDHA-216ENST00000538451 PNPLA7Q6ZV29 1317 aa12.57□□□□□ -0.4
LDHA-216ENST00000538451 QSER1Q2KHR3 1735 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 TAF1LQ8IZX4 1826 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 NPHP1O15259 732 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 PHF14O94880 888 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
LDHA-216ENST00000538451 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
LDHA-216ENST00000538451 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
LDHA-216ENST00000538451 PTGER2P43116 358 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 ATP8B2P98198 1209 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 CEP85Q6P2H3 762 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 UBE3BQ7Z3V4 1068 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
LDHA-216ENST00000538451 SETDB2Q96T68 719 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 C1orf115Q9H7X2 142 aa12.56□□□□□ -0.4
LDHA-216ENST00000538451 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
LDHA-216ENST00000538451 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
LDHA-216ENST00000538451 LRRFIP2Q9Y608 721 aaKnown RBP12.56□□□□□ -0.4
LDHA-216ENST00000538451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.55□□□□□ -0.4
LDHA-216ENST00000538451 H7C1W4 665 aa12.55□□□□□ -0.4
LDHA-216ENST00000538451 POLD1P28340 1107 aa12.55□□□□□ -0.4
LDHA-216ENST00000538451 HLFQ16534 295 aa12.55□□□□□ -0.4
LDHA-216ENST00000538451 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
LDHA-216ENST00000538451 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
LDHA-216ENST00000538451 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
LDHA-216ENST00000538451 GPTP24298 496 aa12.54□□□□□ -0.4
LDHA-216ENST00000538451 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
LDHA-216ENST00000538451 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
LDHA-216ENST00000538451 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
LDHA-216ENST00000538451 MYH14Q7Z406 1995 aaKnown RBP12.54□□□□□ -0.4
LDHA-216ENST00000538451 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
LDHA-216ENST00000538451 SRGAP3O43295 1099 aa12.53□□□□□ -0.4
LDHA-216ENST00000538451 MTX1Q13505 466 aa12.53□□□□□ -0.4
LDHA-216ENST00000538451 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
LDHA-216ENST00000538451 COL23A1Q86Y22 540 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms