RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 STAP2Q9UGK3 403 aa29.29■■■□□ 2.28
PTPMT1-205ENST00000534775 SEC24BO95487 1268 aa29.28■■■□□ 2.28
PTPMT1-205ENST00000534775 PCCAP05165 728 aaPredicted RBP29.28■■■□□ 2.28
PTPMT1-205ENST00000534775 HLFQ16534 295 aa29.28■■■□□ 2.28
PTPMT1-205ENST00000534775 PA2G4Q9UQ80 394 aaKnown RBP29.28■■■□□ 2.28
PTPMT1-205ENST00000534775 EIF5BO60841 1220 aaKnown RBP29.27■■■□□ 2.28
PTPMT1-205ENST00000534775 FOXO4P98177 505 aa29.27■■■□□ 2.28
PTPMT1-205ENST00000534775 FAM182BQ5T319 152 aa29.27■■■□□ 2.28
PTPMT1-205ENST00000534775 COPRSQ9NQ92 184 aa29.27■■■□□ 2.28
PTPMT1-205ENST00000534775 TBC1D2BQ9UPU7 963 aa29.27■■■□□ 2.28
PTPMT1-205ENST00000534775 CDC45O75419 566 aa29.26■■■□□ 2.27
PTPMT1-205ENST00000534775 CLASRPQ8N2M8 674 aaKnown RBP29.26■■■□□ 2.27
PTPMT1-205ENST00000534775 ZBTB38Q8NAP3 1195 aaPredicted RBP29.26■■■□□ 2.27
PTPMT1-205ENST00000534775 LY75O60449 1722 aa29.26■■■□□ 2.27
PTPMT1-205ENST00000534775 CNTNAP4Q9C0A0 1308 aa29.26■■■□□ 2.27
PTPMT1-205ENST00000534775 LMBR1LQ6UX01 489 aa29.25■■■□□ 2.27
PTPMT1-205ENST00000534775 NLRP10Q86W26 655 aa29.25■■■□□ 2.27
PTPMT1-205ENST00000534775 PTF1AQ7RTS3 328 aa29.24■■■□□ 2.27
PTPMT1-205ENST00000534775 RFX5P48382 616 aaPredicted RBP29.23■■■□□ 2.27
PTPMT1-205ENST00000534775 LINC00116Q8NCU8 138 aa29.23■■■□□ 2.27
PTPMT1-205ENST00000534775 CDHR2Q9BYE9 1310 aa29.23■■■□□ 2.27
PTPMT1-205ENST00000534775 BRWD3Q6RI45 1802 aa29.23■■■□□ 2.27
PTPMT1-205ENST00000534775 TUBGCP6Q96RT7 1819 aa29.23■■■□□ 2.27
PTPMT1-205ENST00000534775 RTL5Q5HYW3 569 aaPredicted RBP29.23■■■□□ 2.27
PTPMT1-205ENST00000534775 RC3H1Q5TC82 1133 aaKnown RBP29.22■■■□□ 2.27
PTPMT1-205ENST00000534775 PLA2G12BQ9BX93 195 aa29.22■■■□□ 2.27
PTPMT1-205ENST00000534775 SDSP20132 328 aa29.21■■■□□ 2.27
PTPMT1-205ENST00000534775 GPTP24298 496 aa29.21■■■□□ 2.27
PTPMT1-205ENST00000534775 BCORQ6W2J9 1755 aa29.21■■■□□ 2.27
PTPMT1-205ENST00000534775 ZNF34Q8IZ26 560 aa29.21■■■□□ 2.27
PTPMT1-205ENST00000534775 IPO9Q96P70 1041 aaKnown RBP29.21■■■□□ 2.27
PTPMT1-205ENST00000534775 BCL11BQ9C0K0 894 aaPredicted RBP29.21■■■□□ 2.27
PTPMT1-205ENST00000534775 PTPN12Q05209 780 aaKnown RBP29.2■■■□□ 2.27
PTPMT1-205ENST00000534775 CASC1Q6TDU7 716 aa29.2■■■□□ 2.27
PTPMT1-205ENST00000534775 TBC1D9Q6ZT07 1266 aa29.2■■■□□ 2.27
PTPMT1-205ENST00000534775 NUTM1Q86Y26 1132 aa29.2■■■□□ 2.27
PTPMT1-205ENST00000534775 DDRGK1Q96HY6 314 aa29.2■■■□□ 2.27
PTPMT1-205ENST00000534775 CHMP3Q9Y3E7 222 aa29.2■■■□□ 2.27
PTPMT1-205ENST00000534775 CAMTA2O94983 1202 aa29.2■■■□□ 2.26
PTPMT1-205ENST00000534775 RBM6P78332 1123 aaKnown RBP29.2■■■□□ 2.26
PTPMT1-205ENST00000534775 FAM196AQ6ZSG2 479 aa29.2■■■□□ 2.26
PTPMT1-205ENST00000534775 KRT27Q7Z3Y8 459 aa29.2■■■□□ 2.26
PTPMT1-205ENST00000534775 SIL1Q9H173 461 aa29.2■■■□□ 2.26
PTPMT1-205ENST00000534775 CCNL1Q9UK58 526 aaPredicted RBP29.2■■■□□ 2.26
PTPMT1-205ENST00000534775 USP42Q9H9J4 1324 aaKnown RBP29.19■■■□□ 2.26
PTPMT1-205ENST00000534775 SASH1O94885 1247 aa29.19■■■□□ 2.26
PTPMT1-205ENST00000534775 MFAP1P55081 439 aaKnown RBP29.19■■■□□ 2.26
PTPMT1-205ENST00000534775 FAM89AQ96GI7 184 aa29.19■■■□□ 2.26
PTPMT1-205ENST00000534775 GPATCH3Q96I76 525 aa29.19■■■□□ 2.26
PTPMT1-205ENST00000534775 ZNF652Q9Y2D9 606 aa29.19■■■□□ 2.26
PTPMT1-205ENST00000534775 TTC41PQ6P2S7 1318 aa29.18■■■□□ 2.26
PTPMT1-205ENST00000534775 IFIT2P09913 472 aaKnown RBP29.18■■■□□ 2.26
PTPMT1-205ENST00000534775 KLHDC4Q8TBB5 520 aa29.18■■■□□ 2.26
PTPMT1-205ENST00000534775 TAF1LQ8IZX4 1826 aa29.17■■■□□ 2.26
PTPMT1-205ENST00000534775 TBC1D32Q96NH3 1257 aa29.17■■■□□ 2.26
PTPMT1-205ENST00000534775 RGL2O15211 777 aa29.16■■■□□ 2.26
PTPMT1-205ENST00000534775 PARP10Q53GL7 1025 aa29.16■■■□□ 2.26
PTPMT1-205ENST00000534775 TRMT112Q9UI30 125 aaKnown RBP29.16■■■□□ 2.26
PTPMT1-205ENST00000534775 MYH3P11055 1940 aa29.15■■■□□ 2.26
PTPMT1-205ENST00000534775 TSHZ3Q63HK5 1081 aa29.15■■■□□ 2.26
PTPMT1-205ENST00000534775 AACSQ86V21 672 aa29.15■■■□□ 2.26
PTPMT1-205ENST00000534775 UBN2Q6ZU65 1347 aa29.14■■■□□ 2.26
PTPMT1-205ENST00000534775 ERC2O15083 957 aa29.14■■■□□ 2.26
PTPMT1-205ENST00000534775 CLEC4GQ6UXB4 293 aa29.14■■■□□ 2.26
PTPMT1-205ENST00000534775 AK7Q96M32 723 aa29.13■■■□□ 2.25
PTPMT1-205ENST00000534775 SCN7AQ01118 1682 aa29.13■■■□□ 2.25
PTPMT1-205ENST00000534775 RPS6KA4O75676 772 aa29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 CSF1RP07333 972 aa29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 KCNQ4P56696 695 aa29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 CCDC57Q2TAC2 916 aa29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 GLRX3O76003 335 aaKnown RBP29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 PI4K2BQ8TCG2 481 aa29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 C22orf23Q9BZE7 217 aa29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 ECHDC1Q9NTX5 307 aa29.12■■■□□ 2.25
PTPMT1-205ENST00000534775 IRS4O14654 1257 aaPredicted RBP29.11■■■□□ 2.25
PTPMT1-205ENST00000534775 FBXO3Q9UK99 471 aa29.11■■■□□ 2.25
PTPMT1-205ENST00000534775 AK9Q5TCS8 1911 aa29.1■■■□□ 2.25
PTPMT1-205ENST00000534775 TRIM6-TRIM34B2RNG4 842 aa29.1■■■□□ 2.25
PTPMT1-205ENST00000534775 CIAO1O76071 339 aa29.1■■■□□ 2.25
PTPMT1-205ENST00000534775 HSP90B1P14625 803 aaKnown RBP29.1■■■□□ 2.25
PTPMT1-205ENST00000534775 UTP14AQ9BVJ6 771 aaKnown RBP29.1■■■□□ 2.25
PTPMT1-205ENST00000534775 RGS17Q9UGC6 210 aaPredicted RBP29.1■■■□□ 2.25
PTPMT1-205ENST00000534775 C4BP0C0L5 1744 aa29.1■■■□□ 2.25
PTPMT1-205ENST00000534775 PDE8AO60658 829 aa29.09■■■□□ 2.25
PTPMT1-205ENST00000534775 IL15P40933 162 aaPredicted RBP29.09■■■□□ 2.25
PTPMT1-205ENST00000534775 EAF2Q96CJ1 260 aaPredicted RBP29.09■■■□□ 2.25
PTPMT1-205ENST00000534775 SH3TC1Q8TE82 1336 aa29.09■■■□□ 2.25
PTPMT1-205ENST00000534775 CTSWP56202 376 aa29.09■■■□□ 2.25
PTPMT1-205ENST00000534775 NIP7Q9Y221 180 aaKnown RBP eCLIP29.09■■■□□ 2.25
PTPMT1-205ENST00000534775 EYA2O00167 538 aa29.08■■■□□ 2.25
PTPMT1-205ENST00000534775 GNPATO15228 680 aa29.08■■■□□ 2.25
PTPMT1-205ENST00000534775 TFCP2Q12800 502 aa29.08■■■□□ 2.25
PTPMT1-205ENST00000534775 IFIT5Q13325 482 aaKnown RBP29.08■■■□□ 2.25
PTPMT1-205ENST00000534775 SUSD4Q5VX71 490 aa29.08■■■□□ 2.25
PTPMT1-205ENST00000534775 RILPL2Q969X0 211 aa29.08■■■□□ 2.25
PTPMT1-205ENST00000534775 RTCBQ9Y3I0 505 aaKnown RBP29.08■■■□□ 2.25
PTPMT1-205ENST00000534775 LAMB2P55268 1798 aa29.07■■■□□ 2.24
PTPMT1-205ENST00000534775 RXRBP28702 533 aa29.07■■■□□ 2.24
PTPMT1-205ENST00000534775 TNNI3KQ59H18 835 aa29.06■■■□□ 2.24
PTPMT1-205ENST00000534775 FPGT-TNNI3KV9GXZ4 949 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms