RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TSPY3	P0CV98	308 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	TSPY8	P0CW00	308 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	FKBP15	Q5T1M5	1219 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	LIMCH1	Q9UPQ0	1083 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	CALML4	Q96GE6	196 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	ANKRD2	Q9GZV1	360 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	RSPH6A	Q9H0K4	717 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	SAMM50	Q9Y512	469 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	NUP160	Q12769	1436 aa		18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	STXBP4	Q6ZWJ1	553 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	HMG20B	Q9P0W2	317 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	GNPAT	O15228	680 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	PLCG2	P16885	1265 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	USP16	Q9Y5T5	823 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	VEZT	Q9HBM0	779 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532		B4DLN1	442 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	MRPL12	P52815	198 aa	Known RBP	18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	RHPN1	Q8TCX5	695 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	KRT23	Q9C075	422 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	IP6K1	Q92551	441 aa		18.24	■□□□□ 0.51
NCAPD3-213	ENST00000534532	NPAT	Q14207	1427 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	MAP3K11	Q16584	847 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	HAND2	P61296	217 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	AMPD3	Q01432	767 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	SEPT7	Q16181	437 aa	Known RBP	18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	TAF4B	Q92750	862 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	CETN1	Q12798	172 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	SLC4A8	Q2Y0W8	1093 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	VPS36	Q86VN1	386 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	CCNL1	Q9UK58	526 aa	Predicted RBP	18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	ESR2	Q92731	530 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	PLEKHH1	Q9ULM0	1364 aa		18.23	■□□□□ 0.51
NCAPD3-213	ENST00000534532	LIG1	P18858	919 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	ZRSR2	Q15696	482 aa	Known RBP	18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	CCT2	P78371	535 aa	Known RBP	18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	JAKMIP3	Q5VZ66	844 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	TMTC2	Q8N394	836 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	ITSN2	Q9NZM3	1697 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	METAP2	P50579	478 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	GUCY1B3	Q02153	619 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	MTHFSD	Q2M296	383 aa	Known RBP	18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	LINS1	Q8NG48	757 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	ABCC2	Q92887	1545 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	IRS4	O14654	1257 aa	Predicted RBP	18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	EPB41L2	O43491	1005 aa	Known RBP	18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	SKIDA1	Q1XH10	827 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	RBM17	Q96I25	401 aa	Known RBP	18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	POLK	Q9UBT6	870 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	SLC4A4	Q9Y6R1	1079 aa		18.22	■□□□□ 0.51
NCAPD3-213	ENST00000534532	PICALM	Q13492	652 aa		18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	RBM26	Q5T8P6	1007 aa	Known RBP	18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	MICU3	Q86XE3	530 aa		18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	GNAQ	P50148	359 aa		18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	NEK1	Q96PY6	1258 aa		18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	CNNM2	Q9H8M5	875 aa		18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	CFAP100	Q494V2	611 aa		18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	ZNF771	Q7L3S4	317 aa	Predicted RBP	18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	WTAP	Q15007	396 aa		18.21	■□□□□ 0.51
NCAPD3-213	ENST00000534532	MCM5	P33992	734 aa		18.21	■□□□□ 0.5
NCAPD3-213	ENST00000534532	PYM1	Q9BRP8	204 aa	Known RBP	18.21	■□□□□ 0.5
NCAPD3-213	ENST00000534532	WWC3	Q9ULE0	1092 aa		18.21	■□□□□ 0.5
NCAPD3-213	ENST00000534532	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	IQCE	Q6IPM2	695 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	GOLGA6L10	A6NI86	522 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	KIAA1328	Q86T90	577 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	VTI1A	Q96AJ9	217 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	DRC1	Q96MC2	740 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	TNNI2	P48788	182 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	CACNA2D4	Q7Z3S7	1137 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ZRANB1	Q9UGI0	708 aa		18.2	■□□□□ 0.5
NCAPD3-213	ENST00000534532	CNBD1	Q8NA66	436 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	LRRC27	Q9C0I9	530 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	KLHL10	Q6JEL2	608 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	MAP3K5	Q99683	1374 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	HOXC9	P31274	260 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	UBA7	P41226	1012 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ORC3	Q9UBD5	711 aa	Predicted RBP	18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ATP10A	O60312	1499 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ERMN	Q8TAM6	284 aa		18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	EIF4G3	O43432	1585 aa	Known RBP	18.19	■□□□□ 0.5
NCAPD3-213	ENST00000534532	CCDC144CP	Q8IYA2	1237 aa		18.18	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ANO10	Q9NW15	660 aa		18.18	■□□□□ 0.5
NCAPD3-213	ENST00000534532	EYA1	Q99502	592 aa		18.18	■□□□□ 0.5
NCAPD3-213	ENST00000534532	IDE	P14735	1019 aa		18.18	■□□□□ 0.5
NCAPD3-213	ENST00000534532	CCDC148	Q8NFR7	591 aa		18.18	■□□□□ 0.5
NCAPD3-213	ENST00000534532	SPA17	Q15506	151 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	IFIT1B	Q5T764	474 aa	Known RBP	18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	SLC9C2	Q5TAH2	1124 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	SLC26A6	Q9BXS9	759 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ABCC1	P33527	1531 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	CNNM3	Q8NE01	707 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	RNMT	O43148	476 aa	Known RBP	18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	RIMBP2	O15034	1052 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	PARP10	Q53GL7	1025 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	CKAP2L	Q8IYA6	745 aa		18.17	■□□□□ 0.5
NCAPD3-213	ENST00000534532	ARHGAP29	Q52LW3	1261 aa		18.16	■□□□□ 0.5
NCAPD3-213	ENST00000534532	C20orf194	Q5TEA3	1177 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms