RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 PNPLA7Q6ZV29 1317 aa27.46■■□□□ 1.99
PACSIN3-209ENST00000532457 AMIGO3Q86WK7 504 aa27.45■■□□□ 1.98
PACSIN3-209ENST00000532457 SUCLG2Q96I99 432 aa27.45■■□□□ 1.98
PACSIN3-209ENST00000532457 MSH5O43196 834 aa27.44■■□□□ 1.98
PACSIN3-209ENST00000532457 TUBGCP6Q96RT7 1819 aa27.44■■□□□ 1.98
PACSIN3-209ENST00000532457 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
PACSIN3-209ENST00000532457 CASP7P55210 303 aa27.44■■□□□ 1.98
PACSIN3-209ENST00000532457 COL23A1Q86Y22 540 aaPredicted RBP27.44■■□□□ 1.98
PACSIN3-209ENST00000532457 DCTPP1Q9H773 170 aa27.44■■□□□ 1.98
PACSIN3-209ENST00000532457 AFDNP55196 1824 aaKnown RBP27.43■■□□□ 1.98
PACSIN3-209ENST00000532457 ZPR1O75312 459 aa27.43■■□□□ 1.98
PACSIN3-209ENST00000532457 H7C1W4 665 aa27.42■■□□□ 1.98
PACSIN3-209ENST00000532457 CAMTA2O94983 1202 aa27.42■■□□□ 1.98
PACSIN3-209ENST00000532457 TRIM28Q13263 835 aaKnown RBP27.42■■□□□ 1.98
PACSIN3-209ENST00000532457 EPHA10Q5JZY3 1008 aa27.41■■□□□ 1.98
PACSIN3-209ENST00000532457 PPP1R42Q7Z4L9 355 aa27.41■■□□□ 1.98
PACSIN3-209ENST00000532457 CCDC191Q8NCU4 936 aa27.41■■□□□ 1.98
PACSIN3-209ENST00000532457 CWC25Q9NXE8 425 aaPredicted RBP27.41■■□□□ 1.98
PACSIN3-209ENST00000532457 UBE3BQ7Z3V4 1068 aa27.4■■□□□ 1.98
PACSIN3-209ENST00000532457 SLC16A10Q8TF71 515 aa27.4■■□□□ 1.98
PACSIN3-209ENST00000532457 NARFQ9UHQ1 456 aa27.4■■□□□ 1.98
PACSIN3-209ENST00000532457 PSDA5PKW4 1024 aaPredicted RBP27.39■■□□□ 1.98
PACSIN3-209ENST00000532457 GPTP24298 496 aa27.39■■□□□ 1.98
PACSIN3-209ENST00000532457 GCC1Q96CN9 775 aa27.39■■□□□ 1.98
PACSIN3-209ENST00000532457 NUP98P52948 1817 aa27.39■■□□□ 1.97
PACSIN3-209ENST00000532457 RTL5Q5HYW3 569 aaPredicted RBP27.39■■□□□ 1.97
PACSIN3-209ENST00000532457 SSH3Q8TE77 659 aa27.39■■□□□ 1.97
PACSIN3-209ENST00000532457 BICC1Q9H694 974 aaKnown RBP27.39■■□□□ 1.97
PACSIN3-209ENST00000532457 NUCB1Q02818 461 aa27.38■■□□□ 1.97
PACSIN3-209ENST00000532457 POLA2Q14181 598 aa27.38■■□□□ 1.97
PACSIN3-209ENST00000532457 USP42Q9H9J4 1324 aaKnown RBP27.37■■□□□ 1.97
PACSIN3-209ENST00000532457 ZNF34Q8IZ26 560 aa27.37■■□□□ 1.97
PACSIN3-209ENST00000532457 NLRP10Q86W26 655 aa27.37■■□□□ 1.97
PACSIN3-209ENST00000532457 C4AP0C0L4 1744 aa27.36■■□□□ 1.97
PACSIN3-209ENST00000532457 HMMRO75330 724 aa27.36■■□□□ 1.97
PACSIN3-209ENST00000532457 RGS3P49796 1198 aa27.36■■□□□ 1.97
PACSIN3-209ENST00000532457 MTX1Q13505 466 aa27.36■■□□□ 1.97
PACSIN3-209ENST00000532457 ANKRD45Q5TZF3 282 aa27.36■■□□□ 1.97
PACSIN3-209ENST00000532457 RGL2O15211 777 aa27.35■■□□□ 1.97
PACSIN3-209ENST00000532457 SRGAP3O43295 1099 aa27.35■■□□□ 1.97
PACSIN3-209ENST00000532457 PDE4AP27815 886 aa27.35■■□□□ 1.97
PACSIN3-209ENST00000532457 ZNF652Q9Y2D9 606 aa27.35■■□□□ 1.97
PACSIN3-209ENST00000532457 HSP90AB3PQ58FF7 597 aa27.34■■□□□ 1.97
PACSIN3-209ENST00000532457 USPL1Q5W0Q7 1092 aa27.34■■□□□ 1.97
PACSIN3-209ENST00000532457 SYNE4Q8N205 404 aa27.34■■□□□ 1.97
PACSIN3-209ENST00000532457 UBN2Q6ZU65 1347 aa27.34■■□□□ 1.97
PACSIN3-209ENST00000532457 CLEC4GQ6UXB4 293 aa27.34■■□□□ 1.97
PACSIN3-209ENST00000532457 SRP68Q9UHB9 627 aaKnown RBP27.34■■□□□ 1.97
PACSIN3-209ENST00000532457 PDGFDQ9GZP0 370 aaPredicted RBP27.33■■□□□ 1.97
PACSIN3-209ENST00000532457 BCL2L12Q9HB09 334 aa27.33■■□□□ 1.97
PACSIN3-209ENST00000532457 HDAC5Q9UQL6 1122 aa27.33■■□□□ 1.97
PACSIN3-209ENST00000532457 FOXO4P98177 505 aa27.32■■□□□ 1.96
PACSIN3-209ENST00000532457 CHD1LQ86WJ1 897 aa27.32■■□□□ 1.96
PACSIN3-209ENST00000532457 NLGN1Q8N2Q7 840 aa27.32■■□□□ 1.96
PACSIN3-209ENST00000532457 FAM89AQ96GI7 184 aa27.32■■□□□ 1.96
PACSIN3-209ENST00000532457 LNPKQ9C0E8 428 aa27.32■■□□□ 1.96
PACSIN3-209ENST00000532457 EXOC6BQ9Y2D4 811 aa27.32■■□□□ 1.96
PACSIN3-209ENST00000532457 GYS1P13807 737 aa27.32■■□□□ 1.96
PACSIN3-209ENST00000532457 PELP1Q8IZL8 1130 aaKnown RBP27.31■■□□□ 1.96
PACSIN3-209ENST00000532457 CASZ1Q86V15 1759 aa27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 APBB1O00213 710 aa27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 PCCAP05165 728 aaPredicted RBP27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 MTFR1LQ9H019 292 aa27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 ANKRD36CQ5JPF3 1778 aa27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 SMARCA5O60264 1052 aaPredicted RBP27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 RABL6Q3YEC7 729 aaPredicted RBP27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 ZBTB38Q8NAP3 1195 aaPredicted RBP27.3■■□□□ 1.96
PACSIN3-209ENST00000532457 SCN7AQ01118 1682 aa27.29■■□□□ 1.96
PACSIN3-209ENST00000532457 SUSD4Q5VX71 490 aa27.29■■□□□ 1.96
PACSIN3-209ENST00000532457 BCORQ6W2J9 1755 aa27.28■■□□□ 1.96
PACSIN3-209ENST00000532457 PA2G4Q9UQ80 394 aaKnown RBP27.27■■□□□ 1.96
PACSIN3-209ENST00000532457 C16orf71Q8IYS4 520 aaPredicted RBP27.27■■□□□ 1.96
PACSIN3-209ENST00000532457 NIP7Q9Y221 180 aaKnown RBP eCLIP27.27■■□□□ 1.96
PACSIN3-209ENST00000532457 SURF6O75683 361 aaKnown RBP27.26■■□□□ 1.95
PACSIN3-209ENST00000532457 ZBTB7AO95365 584 aa27.26■■□□□ 1.95
PACSIN3-209ENST00000532457 LMBR1LQ6UX01 489 aa27.26■■□□□ 1.95
PACSIN3-209ENST00000532457 TRMT112Q9UI30 125 aaKnown RBP27.26■■□□□ 1.95
PACSIN3-209ENST00000532457 RFX5P48382 616 aaPredicted RBP27.25■■□□□ 1.95
PACSIN3-209ENST00000532457 KLHDC4Q8TBB5 520 aa27.25■■□□□ 1.95
PACSIN3-209ENST00000532457 NOP58Q9Y2X3 529 aaKnown RBP27.25■■□□□ 1.95
PACSIN3-209ENST00000532457 FAM177BA6PVY3 158 aa27.24■■□□□ 1.95
PACSIN3-209ENST00000532457 TBC1D9BQ66K14 1250 aa27.24■■□□□ 1.95
PACSIN3-209ENST00000532457 MSL1Q68DK7 614 aa27.24■■□□□ 1.95
PACSIN3-209ENST00000532457 SETDB2Q96T68 719 aa27.23■■□□□ 1.95
PACSIN3-209ENST00000532457 BCL11AQ9H165 835 aa27.23■■□□□ 1.95
PACSIN3-209ENST00000532457 CDHR2Q9BYE9 1310 aa27.22■■□□□ 1.95
PACSIN3-209ENST00000532457 PLA2G12BQ9BX93 195 aa27.22■■□□□ 1.95
PACSIN3-209ENST00000532457 ATF5Q9Y2D1 282 aaPredicted RBP27.22■■□□□ 1.95
PACSIN3-209ENST00000532457 POLD1P28340 1107 aa27.21■■□□□ 1.95
PACSIN3-209ENST00000532457 PARP10Q53GL7 1025 aa27.21■■□□□ 1.95
PACSIN3-209ENST00000532457 OTUD7AQ8TE49 926 aaPredicted RBP27.21■■□□□ 1.95
PACSIN3-209ENST00000532457 SPON1Q9HCB6 807 aa27.21■■□□□ 1.95
PACSIN3-209ENST00000532457 TM4SF1P30408 202 aa27.2■■□□□ 1.95
PACSIN3-209ENST00000532457 BICDL1Q6ZP65 573 aa27.2■■□□□ 1.95
PACSIN3-209ENST00000532457 UTP14AQ9BVJ6 771 aaKnown RBP27.2■■□□□ 1.95
PACSIN3-209ENST00000532457 IRS4O14654 1257 aaPredicted RBP27.2■■□□□ 1.94
PACSIN3-209ENST00000532457 NTSR2O95665 410 aa27.2■■□□□ 1.94
PACSIN3-209ENST00000532457 PTPN12Q05209 780 aaKnown RBP27.2■■□□□ 1.94
PACSIN3-209ENST00000532457 NFIXQ14938 502 aa27.2■■□□□ 1.94
PACSIN3-209ENST00000532457 CSF1RP07333 972 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms